Autor: "Mueller LA" - OpacWWW

Skocz do pozycji: 41.

Tytuł:: From manual curation to visualization of gene families and networks across Solanaceae plant species.
Autorzy:: Pujar A; Boyce Thompson Institute for Plant Research, 533, Tower Road, Ithaca, NY 14853, USA.
Menda N
Bombarely A
Edwards JD
Strickler SR
Mueller LA; Pokaż więcej
Źródło:: Database : the journal of biological databases and curation [Database (Oxford)] 2013 May 15; Vol. 2013, pp. bat028. Date of Electronic Publication: 2013 May 15 (Print Publication: 2013).
Typ publikacji:: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Molecular Sequence Annotation*
Data Mining/*methods
Gene Regulatory Networks/*genetics
Genes, Plant/*genetics
Multigene Family/*genetics
Solanaceae/*genetics
Adaptation, Physiological/genetics ; Chromosomes, Plant/genetics ; Droughts ; Genetic Markers ; Stress, Physiological/genetics

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Skocz do pozycji: 42.

Tytuł:: The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions.
Autorzy:: Guo S; National Engineering Research Center for Vegetables, Beijing Academy of Agriculture and Forestry Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Beijing, China.
Zhang J
Sun H
Salse J
Lucas WJ
Zhang H
Zheng Y
Mao L
Ren Y
Wang Z
Min J
Guo X
Murat F
Ham BK
Zhang Z
Gao S
Huang M
Xu Y
Zhong S
Bombarely A
Mueller LA
Zhao H
He H
Zhang Y
Zhang Z
Huang S
Tan T
Pang E
Lin K
Hu Q
Kuang H
Ni P
Wang B
Liu J
Kou Q
Hou W
Zou X
Jiang J
Gong G
Klee K
Schoof H
Huang Y
Hu X
Dong S
Liang D
Wang J
Wu K
Xia Y
Zhao X
Zheng Z
Xing M
Liang X
Huang B
Lv T
Wang J
Yin Y
Yi H
Li R
Wu M
Levi A
Zhang X
Giovannoni JJ
Wang J
Li Y
Fei Z
Xu Y; Pokaż więcej
Źródło:: Nature genetics [Nat Genet] 2013 Jan; Vol. 45 (1), pp. 51-8. Date of Electronic Publication: 2012 Nov 25.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Genome, Plant*
Citrullus/*genetics
Chromosome Mapping ; Chromosomes, Plant ; Citrullus/classification ; Computational Biology/methods ; Evolution, Molecular ; Gene Expression Profiling ; Gene Expression Regulation, Plant ; Genetic Variation ; High-Throughput Nucleotide Sequencing ; Molecular Sequence Annotation ; Molecular Sequence Data ; Phylogeny ; Repetitive Sequences, Nucleic Acid ; Transcriptome

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Skocz do pozycji: 43.

Tytuł:: Characterization of transcriptional changes in ERG rearrangement-positive prostate cancer identifies the regulation of metabolic sensors such as neuropeptide Y.
Autorzy:: Massoner P; Division of Experimental Urology, Department of Urology, Innsbruck Medical University, Innsbruck, Austria. />Kugler KG
Unterberger K
Kuner R
Mueller LA
Fälth M
Schäfer G
Seifarth C
Ecker S
Verdorfer I
Graber A
Sültmann H
Klocker H; Pokaż więcej
Źródło:: PloS one [PLoS One] 2013; Vol. 8 (2), pp. e55207. Date of Electronic Publication: 2013 Feb 04.
Typ publikacji:: Journal Article; Meta-Analysis; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Regulation, Neoplastic*
Neuropeptide Y/*genetics
Prostatic Neoplasms/*genetics
Prostatic Neoplasms/*metabolism
RNA, Messenger/*genetics
Trans-Activators/*genetics
1-Alkyl-2-acetylglycerophosphocholine Esterase ; Adipokines ; Aged ; Biological Transport ; Carrier Proteins/genetics ; Carrier Proteins/metabolism ; Gene Expression Profiling ; Glucose/metabolism ; Glycoproteins/genetics ; Glycoproteins/metabolism ; Humans ; Male ; Middle Aged ; Neuropeptide Y/metabolism ; Oligonucleotide Array Sequence Analysis ; Peptides/genetics ; Peptides/metabolism ; Phospholipases A2/genetics ; Phospholipases A2/metabolism ; Prostatic Neoplasms/pathology ; RNA, Messenger/metabolism ; Signal Transduction ; Trans-Activators/metabolism ; Transcription, Genetic ; Transcriptional Regulator ERG ; Trefoil Factor-3

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Skocz do pozycji: 44.

Tytuł:: Deciphering the complex leaf transcriptome of the allotetraploid species Nicotiana tabacum: a phylogenomic perspective.
Autorzy:: Bombarely A; Boyce Thompson Institute for Plant Research, Tower Road, Ithaca, NY 14853-1801, USA.
Edwards KD
Sanchez-Tamburrino J
Mueller LA; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2012 Aug 17; Vol. 13, pp. 406. Date of Electronic Publication: 2012 Aug 17.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Tetraploidy*
Genome, Plant/*genetics
Plant Leaves/*genetics
Nicotiana/*genetics
Transcriptome/*genetics
Base Sequence ; Chromosome Mapping ; DNA, Plant/genetics ; Evolution, Molecular ; Gene Expression ; Gene Expression Profiling ; Genes, Duplicate ; Genes, Plant ; Genetic Speciation ; High-Throughput Nucleotide Sequencing ; Phylogeny ; Sequence Analysis, DNA

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Skocz do pozycji: 45.

Tytuł:: Single copy nuclear gene analysis of polyploidy in wild potatoes (Solanum section Petota).
Autorzy:: Cai D; Department of Horticulture, the State Agricultural Ministry Key Laboratory of Horticultural Plant Growth, Development and Quality Improvement, 866 Yuhangtang Road, Zhejiang University, Hangzhou, Zhejiang 310058, China.
Rodríguez F
Teng Y
Ané C
Bonierbale M
Mueller LA
Spooner DM; Pokaż więcej
Źródło:: BMC evolutionary biology [BMC Evol Biol] 2012 May 24; Vol. 12, pp. 70. Date of Electronic Publication: 2012 May 24.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Genome, Plant*
Phylogeny*
Polyploidy*
Solanum tuberosum/*genetics
Alleles ; Biological Evolution ; Central America ; DNA, Plant/genetics ; Models, Genetic ; Sequence Alignment ; Sequence Analysis, DNA ; South America

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Skocz do pozycji: 46.

Tytuł:: Structural measures for network biology using QuACN.
Autorzy:: Mueller LA; Institute for Bioinformatics and Translational Research, Department of Biomedical Sciences and Engineering, University for Health Sciences, Medical Informatics and Technology (UMIT), EWZ 1, Hall in Tirol, Austria.
Kugler KG
Graber A
Emmert-Streib F
Dehmer M; Pokaż więcej
Źródło:: BMC bioinformatics [BMC Bioinformatics] 2011 Dec 24; Vol. 12, pp. 492. Date of Electronic Publication: 2011 Dec 24.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Regulatory Networks*
Software*
Entropy ; Protein Interaction Maps

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Skocz do pozycji: 47.

Tytuł:: The Chado Natural Diversity module: a new generic database schema for large-scale phenotyping and genotyping data.
Autorzy:: Jung S; Department of Horticulture and Landscape, Washington State University, Pullman, WA 99164, USA. sook_ />Menda N
Redmond S
Buels RM
Friesen M
Bendana Y
Sanderson LA
Lapp H
Lee T
MacCallum B
Bett KE
Cain S
Clements D
Mueller LA
Main D; Pokaż więcej
Źródło:: Database : the journal of biological databases and curation [Database (Oxford)] 2011 Nov 26; Vol. 2011, pp. bar051. Date of Electronic Publication: 2011 Nov 26 (Print Publication: 2011).
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Biodiversity*
Database Management Systems*
Databases, Factual*
Computational Biology/*methods
Animals ; Genotype ; Internet ; Phenotype ; Plants

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Skocz do pozycji: 48.

Tytuł:: A network-based approach to classify the three domains of life.
Autorzy:: Mueller LA; Institute for Bioinformatics and Translational Research, Department of Biomedical Sciences and Engineering, University for Health Sciences, Medical Informatics and Technology (UMIT), Austria.
Kugler KG
Netzer M
Graber A
Dehmer M; Pokaż więcej
Źródło:: Biology direct [Biol Direct] 2011 Oct 13; Vol. 6, pp. 53. Date of Electronic Publication: 2011 Oct 13.
Typ publikacji:: Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Metabolic Networks and Pathways*
Archaea/*classification
Bacteria/*classification
Eukaryota/*classification
Algorithms ; Analysis of Variance ; Archaea/metabolism ; Artificial Intelligence ; Bacteria/metabolism ; Computer Graphics ; Eukaryota/metabolism ; Logistic Models ; Reproducibility of Results ; Software

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Skocz do pozycji: 49.

Tytuł:: Integrative network biology: graph prototyping for co-expression cancer networks.
Autorzy:: Kugler KG; Institute for Bioinformatics and Translational Research, UMIT, Hall in Tyrol, Austria.
Mueller LA
Graber A
Dehmer M; Pokaż więcej
Źródło:: PloS one [PLoS One] 2011; Vol. 6 (7), pp. e22843. Date of Electronic Publication: 2011 Jul 29.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Computer Graphics*
Gene Regulatory Networks*
Protein Interaction Mapping*
Prostatic Neoplasms/*genetics
Prostatic Neoplasms/*metabolism
Algorithms ; Computational Biology ; Computer Simulation ; Humans ; Male

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Skocz do pozycji: 50.

Tytuł:: Analysis of ultra low genome conservation in Clostridium difficile.
Autorzy:: Scaria J; Department of Population Medicine and Diagnostic Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York, United States of America.
Ponnala L
Janvilisri T
Yan W
Mueller LA
Chang YF; Pokaż więcej
Źródło:: PloS one [PLoS One] 2010 Dec 08; Vol. 5 (12), pp. e15147. Date of Electronic Publication: 2010 Dec 08.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:: Genome, Bacterial*
Clostridioides difficile/*genetics
Animals ; Anti-Bacterial Agents/pharmacology ; Cattle ; Comparative Genomic Hybridization ; DNA, Bacterial/genetics ; Drug Resistance, Bacterial/genetics ; Genetic Variation ; Horses ; Humans ; Models, Genetic ; Sequence Analysis, DNA ; Species Specificity ; Virulence

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Skocz do pozycji: 51.

Tytuł:: solQTL: a tool for QTL analysis, visualization and linking to genomes at SGN database.
Autorzy:: Tecle IY; Boyce Thompson Institute for Plant Research, Tower Rd, Ithaca, NY 14853, USA.
Menda N
Buels RM
van der Knaap E
Mueller LA; Pokaż więcej
Źródło:: BMC bioinformatics [BMC Bioinformatics] 2010 Oct 21; Vol. 11, pp. 525. Date of Electronic Publication: 2010 Oct 21.
Typ publikacji:: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Genome, Plant*
Software*
Genomics/*methods
Quantitative Trait Loci/*genetics
Algorithms ; Databases, Factual ; Databases, Genetic ; Phenotype ; Solanaceae/genetics

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Skocz do pozycji: 52.

Tytuł:: New polynomial-based molecular descriptors with low degeneracy.
Autorzy:: Dehmer M; Institute for Bioinformatics and Translational Research, Private Universität für Medizinische Informatik und Technik (UMIT), Hall in Tirol, Austria. />Mueller LA
Graber A; Pokaż więcej
Źródło:: PloS one [PLoS One] 2010 Jul 30; Vol. 5 (7), pp. e11393. Date of Electronic Publication: 2010 Jul 30.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Algorithms*
Databases, Factual*
Models, Theoretical*
Models, Chemical ; Numerical Analysis, Computer-Assisted

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Skocz do pozycji: 53.

Tytuł:: Progressive femoral cortical and cancellous bone density loss after uncemented tapered-design stem fixation.
Autorzy:: Mueller LA; Department of Orthopaedic Surgery, Friedrich Alexander University of Erlangen-Nuremberg, Erlangen. />Nowak TE
Haeberle L
Mueller LP
Kress A
Voelk M
Pfander D
Forst R
Schmidt R; Pokaż więcej
Źródło:: Acta orthopaedica [Acta Orthop] 2010 Apr; Vol. 81 (2), pp. 171-7.
Typ publikacji:: Journal Article
MeSH Terms:: Bone Density*
Arthroplasty, Replacement, Hip/*adverse effects
Absorptiometry, Photon ; Adult ; Aged ; Arthroplasty, Replacement, Hip/methods ; Bone Remodeling ; Cementation ; Female ; Follow-Up Studies ; Hip Joint/diagnostic imaging ; Hip Prosthesis/adverse effects ; Humans ; Male ; Middle Aged ; Osteoarthritis, Hip/surgery ; Prospective Studies ; Prosthesis Design ; Prosthesis Failure ; Reoperation ; Tomography, X-Ray Computed

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Skocz do pozycji: 54.

Tytuł:: MADAM - An open source meta-analysis toolbox for R and Bioconductor.
Autorzy:: Kugler KG; Institute for Bioinformatics and Translational Research, UMIT, Eduard Wallnöfer-Zentrum 1, Hall in Tirol, 6060, Austria. .
Mueller LA
Graber A; Pokaż więcej
Źródło:: Source code for biology and medicine [Source Code Biol Med] 2010 Mar 01; Vol. 5, pp. 3. Date of Electronic Publication: 2010 Mar 01.
Typ publikacji:: Journal Article

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Skocz do pozycji: 55.

Tytuł:: TobEA: an atlas of tobacco gene expression from seed to senescence.
Autorzy:: Edwards KD; Advanced Technologies (Cambridge) Ltd, 210 Cambridge Science Park, Cambridge, UK. />Bombarely A
Story GW
Allen F
Mueller LA
Coates SA
Jones L; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2010 Feb 26; Vol. 11, pp. 142. Date of Electronic Publication: 2010 Feb 26.
Typ publikacji:: Journal Article
MeSH Terms:: Gene Expression Profiling*
Oligonucleotide Array Sequence Analysis*
Nicotiana/*genetics
Chromosome Mapping ; Cluster Analysis ; Gene Expression Regulation, Developmental ; Gene Expression Regulation, Plant ; Gene Library ; Gene Regulatory Networks ; Genes, Plant ; Genome, Plant ; RNA, Plant/genetics ; Seeds/genetics ; User-Computer Interface

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Skocz do pozycji: 56.

Tytuł:: Comparative BAC end sequence analysis of tomato and potato reveals overrepresentation of specific gene families in potato.
Autorzy:: Datema E; Applied Bioinformatics, Plant Research International, PO Box 16, 6700 AA, Wageningen, The Netherlands. />Mueller LA
Buels R
Giovannoni JJ
Visser RG
Stiekema WJ
van Ham RC; Pokaż więcej
Źródło:: BMC plant biology [BMC Plant Biol] 2008 Apr 11; Vol. 8, pp. 34. Date of Electronic Publication: 2008 Apr 11.
Typ publikacji:: Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Genome, Plant*
Solanum lycopersicum/*genetics
Sequence Analysis, DNA/*methods
Solanum tuberosum/*genetics
Chromosome Mapping ; Expressed Sequence Tags ; Genes, Plant ; Plant Proteins/genetics