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Wyszukujesz frazę ""Mutagenesis, Site-Directed"" wg kryterium: Temat


Tytuł :
Immobilization of enzymes on nanoinorganic support materials: An update.
Autorzy :
Ashkan Z; Department of Biology, Faculty of Basic Sciences, Shahrekord University, Sharekord, Iran.
Hemmati R; Department of Biology, Faculty of Basic Sciences, Shahrekord University, Sharekord, Iran; Biotechnology Research Institute, Shahrekord University, Shahrekord, Iran. Electronic address: .
Homaei A; Department of Marine Biology, Faculty of Marine Science and Technology, University of Hormozgan, Bandar Abbas, Iran.
Dinari A; Department of Polymer Engineering, Faculty of Chemical Engineering, Tarbiat Modares University, Iran.
Jamlidoost M; Department of Virology, Clinical Microbiology Research Center, Namazi Hospital, Shiraz University of Medical Sciences, Iran.
Tashakor A; Irish Centre for Vascular Biology, Royal College of Surgeons in Ireland, Dublin 2, Ireland; School of Pharmacy and Bimolecular Sciences, Royal College of Surgeons in Ireland, Dublin 2, Ireland.
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Źródło :
International journal of biological macromolecules [Int J Biol Macromol] 2021 Jan 31; Vol. 168, pp. 708-721. Date of Electronic Publication: 2020 Nov 21.
Typ publikacji :
Journal Article; Review
MeSH Terms :
Mutagenesis, Site-Directed*
Enzymes, Immobilized/*chemistry
Nanostructures/*chemistry
Adsorption ; Enzyme Stability ; Enzymes, Immobilized/genetics ; Kinetics ; Thermodynamics
Czasopismo naukowe
Tytuł :
New Frontiers for Site-Directed RNA Editing: Harnessing Endogenous ADARs.
Autorzy :
Merkle T; Interfaculty Institute of Biochemistry, University of Tübingen, Tübingen, Germany.
Stafforst T; Interfaculty Institute of Biochemistry, University of Tübingen, Tübingen, Germany. .
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Źródło :
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2021; Vol. 2181, pp. 331-349.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Adenosine Deaminase/*physiology
Mutagenesis, Site-Directed/*methods
RNA Editing/*physiology
RNA-Binding Proteins/*physiology
A549 Cells ; Adenosine Deaminase/genetics ; Cells, Cultured ; HEK293 Cells ; HeLa Cells ; Hep G2 Cells ; Humans ; Mutagenesis, Site-Directed/trends ; RNA-Binding Proteins/genetics
Czasopismo naukowe
Tytuł :
Engineering of a Brighter Variant of the FusionRed Fluorescent Protein Using Lifetime Flow Cytometry and Structure-Guided Mutations.
Autorzy :
Mukherjee S; JILA, University of Colorado at Boulder and National Institute of Standards and Technology, 440 UCB, Boulder, Colorado 80309, United States.; Department of Chemistry, University of Colorado at Boulder, 215 UCB, Boulder, Colorado 80309, United States.
Hung ST; JILA, University of Colorado at Boulder and National Institute of Standards and Technology, 440 UCB, Boulder, Colorado 80309, United States.
Douglas N; JILA, University of Colorado at Boulder and National Institute of Standards and Technology, 440 UCB, Boulder, Colorado 80309, United States.
Manna P; Department of Chemistry, MIT, 77 Massachusetts Avenue, 18-084, Cambridge, Massachusetts 02139, United States.
Thomas C; JILA, University of Colorado at Boulder and National Institute of Standards and Technology, 440 UCB, Boulder, Colorado 80309, United States.
Ekrem A; JILA, University of Colorado at Boulder and National Institute of Standards and Technology, 440 UCB, Boulder, Colorado 80309, United States.
Palmer AE; Department of Biochemistry, University of Colorado at Boulder, 596 UCB, Boulder, Colorado 80309, United States.; BioFrontiers Institute, University of Colorado, Boulder, 596 UCB, Boulder, Colorado 80309, United States.
Jimenez R; JILA, University of Colorado at Boulder and National Institute of Standards and Technology, 440 UCB, Boulder, Colorado 80309, United States.; Department of Chemistry, University of Colorado at Boulder, 215 UCB, Boulder, Colorado 80309, United States.
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Źródło :
Biochemistry [Biochemistry] 2020 Oct 06; Vol. 59 (39), pp. 3669-3682. Date of Electronic Publication: 2020 Sep 24.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Mutagenesis, Site-Directed*/methods
Luminescent Proteins/*chemistry
Luminescent Proteins/*genetics
Crystallography, X-Ray ; Escherichia coli/genetics ; Flow Cytometry ; Fluorescence ; Fluorescent Dyes/chemistry ; Fluorescent Dyes/metabolism ; HeLa Cells ; Humans ; Models, Molecular ; Point Mutation ; Protein Conformation ; Recombinant Fusion Proteins/chemistry ; Recombinant Fusion Proteins/genetics ; Saccharomyces cerevisiae/genetics
Czasopismo naukowe
Tytuł :
Engineering Burkholderia xenovorans LB400 BphA through Site-Directed Mutagenesis at Position 283.
Autorzy :
Li J; Key Laboratory of Coastal Biology and Bioresource Utilization, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, China.; Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.; University of Chinese Academy of Sciences, Beijing, China.
Min J; Key Laboratory of Coastal Biology and Bioresource Utilization, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, China.; Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.; Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, China.
Wang Y; Key Laboratory of Coastal Biology and Bioresource Utilization, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, China.; Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.; Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, China.
Chen W; Key Laboratory of Coastal Biology and Bioresource Utilization, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, China.; Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.; University of Chinese Academy of Sciences, Beijing, China.
Kong Y; Key Laboratory of Coastal Biology and Bioresource Utilization, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, China.; Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.; University of Chinese Academy of Sciences, Beijing, China.
Guo T; Key Laboratory of Coastal Biology and Bioresource Utilization, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, China.
Mahto JK; Department of Biotechnology, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, India.
Sylvestre M; Institut National de la Recherche Scientifique (INRS-Institut Armand-Frappier), Laval, Québec, Canada.
Hu X; Key Laboratory of Coastal Biology and Bioresource Utilization, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, China .; Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.; Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, China.
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Źródło :
Applied and environmental microbiology [Appl Environ Microbiol] 2020 Sep 17; Vol. 86 (19). Date of Electronic Publication: 2020 Sep 17 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Mutagenesis, Site-Directed*
Bacterial Proteins/*genetics
Burkholderiaceae/*genetics
Polychlorinated Biphenyls/*metabolism
Bacterial Proteins/metabolism ; Burkholderiaceae/metabolism ; Dioxygenases/genetics ; Dioxygenases/metabolism ; Genetic Engineering
SCR Organism :
Paraburkholderia xenovorans
Czasopismo naukowe
Tytuł :
Improving the Thermostability of Glutamate Decarboxylase from Lactobacillus brevis by Consensus Mutagenesis.
Autorzy :
Hua Y; School of Biological and Chemical Engineering, Zhejiang University of Science and Technology, Hangzhou, 310023, China.
Lyu C; School of Biological and Chemical Engineering, Zhejiang University of Science and Technology, Hangzhou, 310023, China.
Liu C; School of Biological and Chemical Engineering, Zhejiang University of Science and Technology, Hangzhou, 310023, China.
Wang H; School of Biological and Chemical Engineering, Zhejiang University of Science and Technology, Hangzhou, 310023, China.
Hu S; School of Biotechnology and Chemical Engineering, Ningbo Institute of Technology, Zhejiang University, Ningbo, 315100, China.
Zhao W; School of Biotechnology and Chemical Engineering, Ningbo Institute of Technology, Zhejiang University, Ningbo, 315100, China.
Mei J; Hangzhou Huadong Medicine Group Co. Ltd, Hangzhou, 310011, China.
Huang J; School of Biological and Chemical Engineering, Zhejiang University of Science and Technology, Hangzhou, 310023, China. .
Mei L; School of Biotechnology and Chemical Engineering, Ningbo Institute of Technology, Zhejiang University, Ningbo, 315100, China. .
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Źródło :
Applied biochemistry and biotechnology [Appl Biochem Biotechnol] 2020 Aug; Vol. 191 (4), pp. 1456-1469. Date of Electronic Publication: 2020 Mar 03.
Typ publikacji :
Journal Article
MeSH Terms :
Mutagenesis, Site-Directed*
Glutamate Decarboxylase/*genetics
Lactobacillus brevis/*enzymology
Catalysis ; Disulfides ; Enzyme Stability ; Glutamic Acid ; Industrial Microbiology ; Kinetics ; Mutation ; Temperature ; Thermodynamics
Czasopismo naukowe
Tytuł :
Effect of Polar Amino Acid Residue Substitution by Site-Directed Mutagenesis in the N-terminal Domain of Pseudomonas sp. Phytase on Enzyme Activity.
Autorzy :
Lee GH; Department of Biotechnology, Pukyong National University, Busan 48513, Republic of Korea.
Jang WJ; Department of Biotechnology, Pukyong National University, Busan 48513, Republic of Korea.
Kim S; Department of Biotechnology, Pukyong National University, Busan 48513, Republic of Korea.
Kim Y; Department of Biotechnology, Pukyong National University, Busan 48513, Republic of Korea.
Kong IS; Department of Biotechnology, Pukyong National University, Busan 48513, Republic of Korea.
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Źródło :
Journal of microbiology and biotechnology [J Microbiol Biotechnol] 2020 Jul 28; Vol. 30 (7), pp. 2003-3020.
Typ publikacji :
Journal Article
MeSH Terms :
Amino Acid Substitution*
Mutagenesis, Site-Directed*
6-Phytase/*genetics
6-Phytase/*metabolism
Pseudomonas/*enzymology
Pseudomonas/*genetics
6-Phytase/chemistry ; Amino Acids ; Bacterial Proteins ; Catalysis ; Catalytic Domain ; Endopeptidases ; Enzyme Stability ; Hydrogen-Ion Concentration ; Phytic Acid/metabolism ; Protein Conformation ; Pseudomonas/metabolism ; Temperature
Czasopismo naukowe
Tytuł :
[Site-directed mutagenesis of long gene by partial amplification combining with double fragments ligation].
Autorzy :
Xiao J; Medical College, Hubei University of Arts and Science, Xiangyang 441053, Hubei, China.
Ma M; Medical College, Hubei University of Arts and Science, Xiangyang 441053, Hubei, China.
Liang M; Medical College, Hubei University of Arts and Science, Xiangyang 441053, Hubei, China.
He R; Medical College, Hubei University of Arts and Science, Xiangyang 441053, Hubei, China.
Chen H; Medical College, Hubei University of Arts and Science, Xiangyang 441053, Hubei, China.
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Źródło :
Sheng wu gong cheng xue bao = Chinese journal of biotechnology [Sheng Wu Gong Cheng Xue Bao] 2020 Jun 25; Vol. 36 (6), pp. 1232-1240.
Typ publikacji :
Journal Article
MeSH Terms :
Genetic Vectors*/genetics
Mutagenesis, Site-Directed*/methods
Nucleic Acid Amplification Techniques*
Base Sequence ; Cloning, Molecular ; Plasmids ; Polymerase Chain Reaction
Czasopismo naukowe
Tytuł :
Enzyme-mediated depletion of serum l-Met abrogates prostate cancer growth via multiple mechanisms without evidence of systemic toxicity.
Autorzy :
Lu WC; Department of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712.
Saha A; Division of Pharmacology and Toxicology, Dell Pediatric Research Institute, The University of Texas at Austin, Austin, TX 78712.
Yan W; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX 78712.
Garrison K; Department of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712.
Lamb C; Department of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712.
Pandey R; Department of Nutritional Sciences, The University of Texas at Austin, Austin, TX 78712.
Irani S; Department of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712.
Lodi A; Department of Nutritional Sciences, The University of Texas at Austin, Austin, TX 78712.
Lu X; Department of Nutritional Sciences, The University of Texas at Austin, Austin, TX 78712.
Tiziani S; Department of Nutritional Sciences, The University of Texas at Austin, Austin, TX 78712.
Zhang YJ; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX 78712.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX 78712.
Georgiou G; Department of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712; .; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX 78712.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX 78712.; Department of Oncology, University of Texas Dell Medical School, LiveSTRONG Cancer Institutes, Austin, TX 78712.
DiGiovanni J; Division of Pharmacology and Toxicology, Dell Pediatric Research Institute, The University of Texas at Austin, Austin, TX 78712; .; Department of Oncology, University of Texas Dell Medical School, LiveSTRONG Cancer Institutes, Austin, TX 78712.
Stone E; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX 78712; .; Department of Oncology, University of Texas Dell Medical School, LiveSTRONG Cancer Institutes, Austin, TX 78712.
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Źródło :
Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2020 Jun 09; Vol. 117 (23), pp. 13000-13011. Date of Electronic Publication: 2020 May 20.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Mutagenesis, Site-Directed*
Cystathionine gamma-Lyase/*pharmacology
Methionine/*antagonists & inhibitors
Prostatic Neoplasms/*drug therapy
Animals ; Apoptosis/drug effects ; Autophagy/drug effects ; Cell Line, Tumor ; Cystathionine gamma-Lyase/genetics ; Cystathionine gamma-Lyase/isolation & purification ; Cystathionine gamma-Lyase/therapeutic use ; DNA Damage/drug effects ; Enzyme Assays ; Humans ; Male ; Methionine/blood ; Methionine/metabolism ; Mice ; Poly(ADP-ribose) Polymerases/metabolism ; Prostatic Neoplasms/blood ; Reactive Oxygen Species/metabolism ; Recombinant Proteins/genetics ; Recombinant Proteins/isolation & purification ; Recombinant Proteins/pharmacology ; Recombinant Proteins/therapeutic use ; Toxicity Tests, Acute ; Xenograft Model Antitumor Assays
Czasopismo naukowe
Tytuł :
The molecular pH-response mechanism of the plant light-stress sensor PsbS.
Autorzy :
Krishnan-Schmieden M; Dept. of Solid-State NMR, Leiden Inst. of Chemistry, Leiden University, Leiden, The Netherlands.
Konold PE; Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit, Amsterdam, The Netherlands.
Kennis JTM; Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit, Amsterdam, The Netherlands. .
Pandit A; Dept. of Solid-State NMR, Leiden Inst. of Chemistry, Leiden University, Leiden, The Netherlands. .
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Źródło :
Nature communications [Nat Commun] 2021 Apr 16; Vol. 12 (1), pp. 2291. Date of Electronic Publication: 2021 Apr 16.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Adaptation, Physiological*
Stress, Physiological*
Bryopsida/*physiology
Light/*adverse effects
Photosystem II Protein Complex/*metabolism
Bryopsida/radiation effects ; Glutamic Acid/genetics ; Hydrogen-Ion Concentration/radiation effects ; Mutagenesis, Site-Directed ; Nuclear Magnetic Resonance, Biomolecular ; Photosynthesis/physiology ; Photosystem II Protein Complex/genetics ; Photosystem II Protein Complex/isolation & purification ; Photosystem II Protein Complex/ultrastructure ; Protein Conformation, alpha-Helical ; Recombinant Proteins/genetics ; Recombinant Proteins/isolation & purification ; Recombinant Proteins/metabolism ; Recombinant Proteins/ultrastructure ; Thylakoids/radiation effects
Czasopismo naukowe
Tytuł :
SOD1 regulates ribosome biogenesis in KRAS mutant non-small cell lung cancer.
Autorzy :
Wang X; Rutgers Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA.; Department of Pharmacology, Robert Wood Johnson Medical School, Rutgers, The State University of New Jersey, Piscataway, NJ, USA.; Graduate Program in Cellular and Molecular Pharmacology, Rutgers, The State University of New Jersey, Piscataway, NJ, USA.
Zhang H; Rutgers Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA.; Department of Pharmacology, Robert Wood Johnson Medical School, Rutgers, The State University of New Jersey, Piscataway, NJ, USA.
Sapio R; Department of Cell Biology and Neuroscience, School of Osteopathic Medicine, Rowan University, Stratford, NJ, USA.
Yang J; Department of Cell Biology and Neuroscience, Rutgers, The State University of New Jersey, Piscataway, NJ, USA.
Wong J; Rutgers Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA.
Zhang X; Rutgers Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA.; Department of Pharmacology, Robert Wood Johnson Medical School, Rutgers, The State University of New Jersey, Piscataway, NJ, USA.
Guo JY; Rutgers Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA.; Department of Medicine, Robert Wood Johnson Medical School, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA.
Pine S; Rutgers Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA.; Department of Pharmacology, Robert Wood Johnson Medical School, Rutgers, The State University of New Jersey, Piscataway, NJ, USA.
Van Remmen H; Aging and Metabolism Program, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA.
Li H; Rutgers Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA.; Center for Advanced Proteomics Research and Department of Microbiology, Biochemistry and Molecular Genetics, New Jersey Medical School, Rutgers, The State University of New Jersey, Piscataway, NJ, USA.
White E; Rutgers Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA.; Department of Molecular Biology and Biochemistry, Rutgers, The State University of New Jersey, Piscataway, NJ, USA.
Liu C; Rutgers Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA.; Department of Pathology, Robert Wood Johnson Medical School, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA.
Kiledjian M; Rutgers Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA.; Department of Cell Biology and Neuroscience, Rutgers, The State University of New Jersey, Piscataway, NJ, USA.
Pestov DG; Department of Cell Biology and Neuroscience, School of Osteopathic Medicine, Rowan University, Stratford, NJ, USA. .
Steven Zheng XF; Rutgers Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA. .; Department of Pharmacology, Robert Wood Johnson Medical School, Rutgers, The State University of New Jersey, Piscataway, NJ, USA. .; Graduate Program in Cellular and Molecular Pharmacology, Rutgers, The State University of New Jersey, Piscataway, NJ, USA. .
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Źródło :
Nature communications [Nat Commun] 2021 Apr 15; Vol. 12 (1), pp. 2259. Date of Electronic Publication: 2021 Apr 15.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Organelle Biogenesis*
Carcinoma, Non-Small-Cell Lung/*pathology
Lung Neoplasms/*pathology
Ribosome Subunits, Large, Eukaryotic/*metabolism
Superoxide Dismutase-1/*metabolism
Animals ; Carcinoma, Non-Small-Cell Lung/genetics ; Cell Line, Tumor ; Cell Nucleolus/metabolism ; Cell Nucleus/metabolism ; Cell Proliferation ; Disease Models, Animal ; Female ; Gene Knockdown Techniques ; Humans ; Lung/cytology ; Lung/pathology ; Lung Neoplasms/genetics ; Male ; Mice ; Mice, Knockout ; Mutagenesis, Site-Directed ; Proto-Oncogene Proteins p21(ras)/genetics ; RNA Precursors/metabolism ; RNA Processing, Post-Transcriptional ; Superoxide Dismutase-1/genetics
Czasopismo naukowe
Tytuł :
Physiological role for GABA A receptor desensitization in the induction of long-term potentiation at inhibitory synapses.
Autorzy :
Field M; Department of Neuroscience, Physiology and Pharmacology, UCL, London, UK.; Department of Pharmacology, University of Oxford, Oxford, UK.
Dorovykh V; Department of Neuroscience, Physiology and Pharmacology, UCL, London, UK.
Thomas P; Department of Neuroscience, Physiology and Pharmacology, UCL, London, UK.
Smart TG; Department of Neuroscience, Physiology and Pharmacology, UCL, London, UK. .
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Źródło :
Nature communications [Nat Commun] 2021 Apr 09; Vol. 12 (1), pp. 2112. Date of Electronic Publication: 2021 Apr 09.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Long-Term Potentiation/*physiology
Receptors, GABA-A/*metabolism
Synapses/*metabolism
Synaptic Potentials/*physiology
Allosteric Regulation ; Animals ; Cells, Cultured ; GABA-A Receptor Agonists/pharmacology ; HEK293 Cells ; Hippocampus/cytology ; Humans ; Long-Term Potentiation/drug effects ; Mutagenesis, Site-Directed ; Neurons/metabolism ; Patch-Clamp Techniques ; Phosphorylation ; Primary Cell Culture ; Protein Kinase C/metabolism ; Rats ; Receptors, GABA-A/genetics ; Signal Transduction/drug effects ; Signal Transduction/physiology ; Synapses/drug effects ; Synaptic Potentials/drug effects ; gamma-Aminobutyric Acid/metabolism
Czasopismo naukowe
Tytuł :
Molecular dynamics and in silico mutagenesis on the reversible inhibitor-bound SARS-CoV-2 main protease complexes reveal the role of lateral pocket in enhancing the ligand affinity.
Autorzy :
Weng YL; ArGan's Lab, School of Pharmacy, Faculty of Science, University of Waterloo, Waterloo, ON, Canada.
Naik SR; ArGan's Lab, School of Pharmacy, Faculty of Science, University of Waterloo, Waterloo, ON, Canada.
Dingelstad N; ArGan's Lab, School of Pharmacy, Faculty of Science, University of Waterloo, Waterloo, ON, Canada.
Lugo MR; ArGan's Lab, School of Pharmacy, Faculty of Science, University of Waterloo, Waterloo, ON, Canada.; Department of Chemistry, Faculty of Science, University of Waterloo, Waterloo, ON, Canada.
Kalyaanamoorthy S; Department of Chemistry, Faculty of Science, University of Waterloo, Waterloo, ON, Canada.
Ganesan A; ArGan's Lab, School of Pharmacy, Faculty of Science, University of Waterloo, Waterloo, ON, Canada. .
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Źródło :
Scientific reports [Sci Rep] 2021 Apr 01; Vol. 11 (1), pp. 7429. Date of Electronic Publication: 2021 Apr 01.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Molecular Dynamics Simulation*
Protease Inhibitors/*chemistry
SARS-CoV-2/*metabolism
Viral Matrix Proteins/*antagonists & inhibitors
Binding Sites ; COVID-19/pathology ; COVID-19/virology ; Catalytic Domain ; Databases, Protein ; Humans ; Ligands ; Mutagenesis, Site-Directed ; Principal Component Analysis ; Protease Inhibitors/metabolism ; SARS-CoV-2/isolation & purification ; Thermodynamics ; Viral Matrix Proteins/metabolism
Czasopismo naukowe
Tytuł :
PAK4 suppresses motor neuron degeneration in hSOD1 -linked amyotrophic lateral sclerosis cell and rat models.
Autorzy :
Cong C; Department of Neurology, The First Clinical College of Harbin Medical University, Harbin, China.
Liang W; Department of Neurology, The First Clinical College of Harbin Medical University, Harbin, China.
Zhang C; Department of Neurology, The First Clinical College of Harbin Medical University, Harbin, China.
Wang Y; Department of Neurology, The First Clinical College of Harbin Medical University, Harbin, China.
Yang Y; Department of Neurology, The Second Clinical College of Harbin Medical University, Harbin, China.
Wang X; Department of Neurology, The First Clinical College of Harbin Medical University, Harbin, China.
Wang S; Department of Neurology, The First Clinical College of Harbin Medical University, Harbin, China.
Huo D; Department of Neurology, The First Clinical College of Harbin Medical University, Harbin, China.
Wang H; Department of Neurology, The First Clinical College of Harbin Medical University, Harbin, China.
Wang D; Department of Neurology, The First Clinical College of Harbin Medical University, Harbin, China.
Feng H; Department of Neurology, The First Clinical College of Harbin Medical University, Harbin, China.
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Źródło :
Cell proliferation [Cell Prolif] 2021 Apr; Vol. 54 (4), pp. e13003. Date of Electronic Publication: 2021 Feb 21.
Typ publikacji :
Journal Article
MeSH Terms :
Amyotrophic Lateral Sclerosis/*pathology
Motor Neurons/*metabolism
Superoxide Dismutase-1/*metabolism
p21-Activated Kinases/*metabolism
Amyotrophic Lateral Sclerosis/metabolism ; Amyotrophic Lateral Sclerosis/mortality ; Animals ; Apoptosis/drug effects ; CREB-Binding Protein/antagonists & inhibitors ; CREB-Binding Protein/metabolism ; Cell Line, Tumor ; Disease Models, Animal ; Female ; Mice ; Mice, Inbred C57BL ; Mice, Transgenic ; MicroRNAs/metabolism ; Mutagenesis, Site-Directed ; Neuroprotective Agents/pharmacology ; RNA Interference ; RNA, Small Interfering/metabolism ; Signal Transduction/drug effects ; Superoxide Dismutase-1/genetics ; Survival Rate ; p21-Activated Kinases/antagonists & inhibitors ; p21-Activated Kinases/genetics
Czasopismo naukowe
Tytuł :
Ultraconserved enhancer function does not require perfect sequence conservation.
Autorzy :
Snetkova V; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Ypsilanti AR; Department of Psychiatry, Neuroscience Program, UCSF Weill Institute for Neurosciences, and the Nina Ireland Laboratory of Developmental Neurobiology, University of California, San Francisco, San Francisco, CA, USA.
Akiyama JA; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Mannion BJ; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.; Comparative Biochemistry Program, University of California, Berkeley, Berkeley, CA, USA.
Plajzer-Frick I; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Novak CS; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Harrington AN; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Pham QT; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Kato M; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Zhu Y; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Godoy J; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Meky E; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Hunter RD; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Shi M; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Kvon EZ; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.; Department of Developmental & Cell Biology, Department of Ecology & Evolutionary Biology, University of California, Irvine, Irvine, CA, USA.
Afzal V; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Tran S; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Rubenstein JLR; Department of Psychiatry, Neuroscience Program, UCSF Weill Institute for Neurosciences, and the Nina Ireland Laboratory of Developmental Neurobiology, University of California, San Francisco, San Francisco, CA, USA.
Visel A; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA. .; US Department of Energy Joint Genome Institute, Berkeley, CA, USA. .; School of Natural Sciences, University of California, Merced, Merced, CA, USA. .
Pennacchio LA; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA. .; Comparative Biochemistry Program, University of California, Berkeley, Berkeley, CA, USA. .; US Department of Energy Joint Genome Institute, Berkeley, CA, USA. .
Dickel DE; Environmental Genomics & System Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA. .
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Źródło :
Nature genetics [Nat Genet] 2021 Apr; Vol. 53 (4), pp. 521-528. Date of Electronic Publication: 2021 Mar 29.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Enhancer Elements, Genetic*
Gene Expression Regulation, Developmental*
Mutation*
Transcription Factors/*genetics
Alleles ; Animals ; Base Sequence ; Conserved Sequence ; Embryo, Mammalian ; Humans ; Mice ; Mutagenesis, Site-Directed ; Rats ; Transcription Factors/metabolism
Czasopismo naukowe
Tytuł :
TSP50 promotes hepatocyte proliferation and tumour formation by activating glucose-6-phosphate dehydrogenase (G6PD).
Autorzy :
Zhang X; National Engineering Laboratory for Druggable Gene and Protein Screening, Northeast Normal University, Changchun, China.; Research Center of Agriculture and Medicine Gene Engineering of Ministry of Education, Northeast Normal University, Changchun, China.
Gao F; National Engineering Laboratory for Druggable Gene and Protein Screening, Northeast Normal University, Changchun, China.; Research Center of Agriculture and Medicine Gene Engineering of Ministry of Education, Northeast Normal University, Changchun, China.
Ai H; National Engineering Laboratory for Druggable Gene and Protein Screening, Northeast Normal University, Changchun, China.
Wang S; National Engineering Laboratory for Druggable Gene and Protein Screening, Northeast Normal University, Changchun, China.
Song Z; Research Center of Agriculture and Medicine Gene Engineering of Ministry of Education, Northeast Normal University, Changchun, China.
Zheng L; Research Center of Agriculture and Medicine Gene Engineering of Ministry of Education, Northeast Normal University, Changchun, China.
Wang G; Research Center of Agriculture and Medicine Gene Engineering of Ministry of Education, Northeast Normal University, Changchun, China.
Sun Y; Research Center of Agriculture and Medicine Gene Engineering of Ministry of Education, Northeast Normal University, Changchun, China.
Bao Y; National Engineering Laboratory for Druggable Gene and Protein Screening, Northeast Normal University, Changchun, China.
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Źródło :
Cell proliferation [Cell Prolif] 2021 Apr; Vol. 54 (4), pp. e13015. Date of Electronic Publication: 2021 Feb 25.
Typ publikacji :
Journal Article
MeSH Terms :
Carcinoma, Hepatocellular/*pathology
Glucosephosphate Dehydrogenase/*metabolism
Liver Neoplasms/*pathology
Serine Endopeptidases/*metabolism
Acetylation ; Animals ; Carcinoma, Hepatocellular/metabolism ; Carcinoma, Hepatocellular/mortality ; Cell Line ; Cell Proliferation ; Female ; Glucosephosphate Dehydrogenase/genetics ; Hepatocytes/cytology ; Hepatocytes/metabolism ; Humans ; Lipid Metabolism ; Liver Neoplasms/metabolism ; Liver Neoplasms/mortality ; Mice ; Mice, Nude ; Mutagenesis, Site-Directed ; Protein Binding ; RNA Interference ; RNA, Small Interfering/metabolism ; Serine Endopeptidases/chemistry ; Serine Endopeptidases/genetics ; Survival Rate ; Xenograft Model Antitumor Assays
Czasopismo naukowe
Tytuł :
Engineering better catalytic activity and acidic adaptation into Kluyveromyces marxianus exoinulinase using site-directed mutagenesis.
Autorzy :
Wang CH; College of Light Industry and Food Engineering, Guangxi University, Nanning, China.
Xiong WP; College of Life Science and Technology, Guangxi University, Nanning, China.
Huang C; College of Light Industry and Food Engineering, Guangxi University, Nanning, China.
Li XM; Nanning Sinozyme Biotechnology Co., Ltd, Nanning, China.
Wang QY; State Key Laboratory of Non-Food Biomass and Enzyme Technology, National Engineering Research Center for Non-food Biorefinery, Guangxi Key Laboratory of Biorefinery, Guangxi Academy of Sciences, Nanning, China.
Huang RB; College of Life Science and Technology, Guangxi University, Nanning, China.; State Key Laboratory of Non-Food Biomass and Enzyme Technology, National Engineering Research Center for Non-food Biorefinery, Guangxi Key Laboratory of Biorefinery, Guangxi Academy of Sciences, Nanning, China.
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Źródło :
Journal of the science of food and agriculture [J Sci Food Agric] 2021 Apr; Vol. 101 (6), pp. 2472-2482. Date of Electronic Publication: 2020 Oct 22.
Typ publikacji :
Journal Article
MeSH Terms :
Fungal Proteins/*chemistry
Fungal Proteins/*genetics
Glycoside Hydrolases/*chemistry
Glycoside Hydrolases/*genetics
Kluyveromyces/*enzymology
Acids/metabolism ; Catalysis ; Enzyme Stability ; Fungal Proteins/metabolism ; Glycoside Hydrolases/metabolism ; Hydrogen-Ion Concentration ; Inulin/metabolism ; Kinetics ; Kluyveromyces/chemistry ; Kluyveromyces/genetics ; Mutagenesis, Site-Directed ; Protein Engineering
SCR Organism :
Kluyveromyces marxianus
Czasopismo naukowe
Tytuł :
The m A methylome of SARS-CoV-2 in host cells.
Autorzy :
Liu J; State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, 100871, China.; Beijing Advanced Innovation Center for Genomics (ICG), Peking University, Beijing, 100871, China.; Biomedical Pioneering Innovation Center, Ministry of Education Key Laboratory of Cell Proliferation and Differentiation, Beijing, 100871, China.
Xu YP; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Academy of Military Medical Sciences, Beijing, 100071, China.
Li K; State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, 100871, China.; Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, 100871, China.; Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, 100871, China.
Ye Q; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Academy of Military Medical Sciences, Beijing, 100071, China.
Zhou HY; Suzhou Institute of System Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College, Suzhou, Jiangsu, 215000, China.
Sun H; State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, 100871, China.
Li X; State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, 100871, China.
Yu L; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Academy of Military Medical Sciences, Beijing, 100071, China.
Deng YQ; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Academy of Military Medical Sciences, Beijing, 100071, China.
Li RT; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Academy of Military Medical Sciences, Beijing, 100071, China.
Cheng ML; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Academy of Military Medical Sciences, Beijing, 100071, China.
He B; Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, 100871, China.; Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, 100871, China.
Zhou J; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Academy of Military Medical Sciences, Beijing, 100071, China.
Li XF; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Academy of Military Medical Sciences, Beijing, 100071, China.
Wu A; Suzhou Institute of System Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College, Suzhou, Jiangsu, 215000, China.
Yi C; State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, 100871, China. .; Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, 100871, China. .; Department of Chemical Biology and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China. .
Qin CF; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Academy of Military Medical Sciences, Beijing, 100071, China. .
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Źródło :
Cell research [Cell Res] 2021 Apr; Vol. 31 (4), pp. 404-414. Date of Electronic Publication: 2021 Jan 28.
Typ publikacji :
Journal Article
MeSH Terms :
Genome, Viral*
Adenosine/*analogs & derivatives
SARS-CoV-2/*genetics
Adenosine/metabolism ; Animals ; COVID-19/pathology ; COVID-19/virology ; Cell Line ; Chlorocebus aethiops ; DNA Methylation ; Gene Expression Regulation ; Host-Pathogen Interactions ; Humans ; Mutagenesis, Site-Directed ; Phylogeny ; RNA, Messenger/genetics ; SARS-CoV-2/classification ; SARS-CoV-2/isolation & purification ; SARS-CoV-2/physiology ; Vero Cells ; Virus Replication
Czasopismo naukowe
Tytuł :
Crystal structures of human MGST2 reveal synchronized conformational changes regulating catalysis.
Autorzy :
Thulasingam M; Department of Medical Biochemistry and Biophysics, Division of Chemistry II, Karolinska Institutet, Solnavägen 9, 171 65 Stockholm, Sweden. .
Orellana L; Department of Biochemistry and Biophysics, Stockholm University, Svante Arrhenius väg 16, 106 91 Stockholm, Sweden.; Department of Oncology-Pathology, Karolinska Institutet, Stockholm, Sweden.
Nji E; Department of Biochemistry and Biophysics, Stockholm University, Svante Arrhenius väg 16, 106 91 Stockholm, Sweden.; BioStruct-Africa, Stockholm, Sweden.
Ahmad S; Department of Medical Biochemistry and Biophysics, Division of Chemistry II, Karolinska Institutet, Solnavägen 9, 171 65 Stockholm, Sweden.; Department of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden.
Rinaldo-Matthis A; Department of Medical Biochemistry and Biophysics, Division of Chemistry II, Karolinska Institutet, Solnavägen 9, 171 65 Stockholm, Sweden.
Haeggström JZ; Department of Medical Biochemistry and Biophysics, Division of Chemistry II, Karolinska Institutet, Solnavägen 9, 171 65 Stockholm, Sweden. .
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Źródło :
Nature communications [Nat Commun] 2021 Mar 19; Vol. 12 (1), pp. 1728. Date of Electronic Publication: 2021 Mar 19.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Glutathione Transferase/*chemistry
Glutathione Transferase/*genetics
Glutathione Transferase/*metabolism
Binding Sites ; Catalysis ; Catalytic Domain ; Crystallography, X-Ray ; Endoplasmic Reticulum/metabolism ; Humans ; Leukotriene C4/metabolism ; Molecular Dynamics Simulation ; Mutagenesis, Site-Directed ; Oxidative Stress ; Protein Conformation
Czasopismo naukowe
Tytuł :
Lipid regulation of hERG1 channel function.
Autorzy :
Miranda WE; Centre for Molecular Simulation and Department of Biological Sciences, 507 Campus Drive, University of Calgary, Calgary, AB, Canada.
Guo J; Department of Cardiac Sciences, Libin Cardiovascular Institute of Alberta, 3280 Hospital Dr., University of Calgary, Calgary, AB, Canada.
Mesa-Galloso H; Centre for Molecular Simulation and Department of Biological Sciences, 507 Campus Drive, University of Calgary, Calgary, AB, Canada.
Corradi V; Centre for Molecular Simulation and Department of Biological Sciences, 507 Campus Drive, University of Calgary, Calgary, AB, Canada.
Lees-Miller JP; Department of Cardiac Sciences, Libin Cardiovascular Institute of Alberta, 3280 Hospital Dr., University of Calgary, Calgary, AB, Canada.
Tieleman DP; Centre for Molecular Simulation and Department of Biological Sciences, 507 Campus Drive, University of Calgary, Calgary, AB, Canada. .
Duff HJ; Department of Cardiac Sciences, Libin Cardiovascular Institute of Alberta, 3280 Hospital Dr., University of Calgary, Calgary, AB, Canada. .
Noskov SY; Centre for Molecular Simulation and Department of Biological Sciences, 507 Campus Drive, University of Calgary, Calgary, AB, Canada. .
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Źródło :
Nature communications [Nat Commun] 2021 Mar 03; Vol. 12 (1), pp. 1409. Date of Electronic Publication: 2021 Mar 03.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Ceramides/*metabolism
Ether-A-Go-Go Potassium Channels/*chemistry
Ether-A-Go-Go Potassium Channels/*metabolism
Ceramides/chemistry ; Ceramides/pharmacology ; Electrophysiology/methods ; Ether-A-Go-Go Potassium Channels/antagonists & inhibitors ; Ether-A-Go-Go Potassium Channels/genetics ; HEK293 Cells ; Humans ; Molecular Dynamics Simulation ; Mutagenesis, Site-Directed
Czasopismo naukowe
Tytuł :
Human RNase3 immune modulation by catalytic-dependent and independent modes in a macrophage-cell line infection model.
Autorzy :
Lu L; Department of Biochemistry and Molecular Biology, Faculty of Biosciences, Universitat Autonoma de Barcelona, Cerdanyola del Vallès, Spain.; College of Animal Science and Technology, Sichuan Agricultural University, Chengdu, Sichuan, China.
Wei R; Center of Precision Medicine and Precision Medicine Key Laboratory of Sichuan Province, West China Hospital, Sichuan University, Chengdu, China.
Prats-Ejarque G; Department of Biochemistry and Molecular Biology, Faculty of Biosciences, Universitat Autonoma de Barcelona, Cerdanyola del Vallès, Spain.
Goetz M; Department of Biochemistry and Molecular Biology, Faculty of Biosciences, Universitat Autonoma de Barcelona, Cerdanyola del Vallès, Spain.
Wang G; Center of Precision Medicine and Precision Medicine Key Laboratory of Sichuan Province, West China Hospital, Sichuan University, Chengdu, China.
Torrent M; Department of Biochemistry and Molecular Biology, Faculty of Biosciences, Universitat Autonoma de Barcelona, Cerdanyola del Vallès, Spain.
Boix E; Department of Biochemistry and Molecular Biology, Faculty of Biosciences, Universitat Autonoma de Barcelona, Cerdanyola del Vallès, Spain. .
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Źródło :
Cellular and molecular life sciences : CMLS [Cell Mol Life Sci] 2021 Mar; Vol. 78 (6), pp. 2963-2985. Date of Electronic Publication: 2020 Nov 23.
Typ publikacji :
Journal Article
MeSH Terms :
Eosinophil Cationic Protein/*metabolism
Amino Acid Sequence ; Cell Line ; Down-Regulation ; Eosinophil Cationic Protein/chemistry ; Eosinophil Cationic Protein/genetics ; ErbB Receptors/antagonists & inhibitors ; ErbB Receptors/chemistry ; ErbB Receptors/metabolism ; Erlotinib Hydrochloride/pharmacology ; Humans ; Immunity, Innate ; Macrophages/cytology ; Macrophages/metabolism ; Macrophages/microbiology ; Macrophages/virology ; Mutagenesis, Site-Directed ; Mycobacteriaceae/drug effects ; Mycobacteriaceae/physiology ; Protein Interaction Maps ; Respiratory Syncytial Virus, Human/drug effects ; Respiratory Syncytial Virus, Human/physiology ; Sequence Alignment ; Signal Transduction ; Transcriptome ; Up-Regulation
SCR Organism :
Mycolicibacterium aurum
Czasopismo naukowe

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