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Wyszukujesz frazę ""Neurospora crassa"" wg kryterium: Temat


Tytuł :
Quantitative Proteome Profiling Reveals Cellobiose-Dependent Protein Processing and Export Pathways for the Lignocellulolytic Response in Neurospora crassa.
Autorzy :
Liu D; Biomass Energy Center for Arid and Semi-Arid Lands, Northwest A&F University, Yangling, People's Republic of China.; College of Life Sciences, Northwest A&F University, Yangling, People's Republic of China.
Liu Y; Biomass Energy Center for Arid and Semi-Arid Lands, Northwest A&F University, Yangling, People's Republic of China.; College of Life Sciences, Northwest A&F University, Yangling, People's Republic of China.
Zhang D; Biomass Energy Center for Arid and Semi-Arid Lands, Northwest A&F University, Yangling, People's Republic of China.; College of Life Sciences, Northwest A&F University, Yangling, People's Republic of China.
Chen X; Biomass Energy Center for Arid and Semi-Arid Lands, Northwest A&F University, Yangling, People's Republic of China.; College of Life Sciences, Northwest A&F University, Yangling, People's Republic of China.
Liu Q; Biomass Energy Center for Arid and Semi-Arid Lands, Northwest A&F University, Yangling, People's Republic of China.; College of Life Sciences, Northwest A&F University, Yangling, People's Republic of China.
Xiong B; Biomass Energy Center for Arid and Semi-Arid Lands, Northwest A&F University, Yangling, People's Republic of China.; College of Life Sciences, Northwest A&F University, Yangling, People's Republic of China.
Zhang L; Biomass Energy Center for Arid and Semi-Arid Lands, Northwest A&F University, Yangling, People's Republic of China.; College of Life Sciences, Northwest A&F University, Yangling, People's Republic of China.
Wei L; Biomass Energy Center for Arid and Semi-Arid Lands, Northwest A&F University, Yangling, People's Republic of China.; College of Life Sciences, Northwest A&F University, Yangling, People's Republic of China.
Wang Y; Biomass Energy Center for Arid and Semi-Arid Lands, Northwest A&F University, Yangling, People's Republic of China.; College of Life Sciences, Northwest A&F University, Yangling, People's Republic of China.
Fang H; Biomass Energy Center for Arid and Semi-Arid Lands, Northwest A&F University, Yangling, People's Republic of China.; College of Life Sciences, Northwest A&F University, Yangling, People's Republic of China.
Liesche J; Biomass Energy Center for Arid and Semi-Arid Lands, Northwest A&F University, Yangling, People's Republic of China.; College of Life Sciences, Northwest A&F University, Yangling, People's Republic of China.
Wei Y; Biomass Energy Center for Arid and Semi-Arid Lands, Northwest A&F University, Yangling, People's Republic of China.; Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, Northwest A&F University, Yangling, People's Republic of China.; College of Life Sciences, Northwest A&F University, Yangling, People's Republic of China.
Glass NL; Department of Plant and Microbial Biology, University of California at Berkeley, Berkeley, California, USA.; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Hao Z; Thermo Fisher Scientific, San Jose, California, USA.
Chen S; Biomass Energy Center for Arid and Semi-Arid Lands, Northwest A&F University, Yangling, People's Republic of China .; Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, Northwest A&F University, Yangling, People's Republic of China.; College of Life Sciences, Northwest A&F University, Yangling, People's Republic of China.
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Źródło :
Applied and environmental microbiology [Appl Environ Microbiol] 2020 Jul 20; Vol. 86 (15). Date of Electronic Publication: 2020 Jul 20 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Cellobiose/*metabolism
Fungal Proteins/*metabolism
Neurospora crassa/*metabolism
Proteome/*metabolism
beta-Glucosidase/*genetics
Biofuels/microbiology ; Cellulose/metabolism ; Fungal Proteins/genetics ; Neurospora crassa/enzymology ; Neurospora crassa/genetics ; Proteome/genetics ; beta-Glucosidase/deficiency
Czasopismo naukowe
Tytuł :
Spitzenkörper assembly mechanisms reveal conserved features of fungal and metazoan polarity scaffolds.
Autorzy :
Zheng P; Temasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore.
Nguyen TA; Temasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore.
Wong JY; Temasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore.
Lee M; Temasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore.
Nguyen TA; Temasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore.
Fan JS; Department of Biological Sciences, National University of Singapore, 16 Science Drive 4, Singapore, 117558, Singapore.
Yang D; Department of Biological Sciences, National University of Singapore, 16 Science Drive 4, Singapore, 117558, Singapore.
Jedd G; Temasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore. .; Department of Biological Sciences, National University of Singapore, 16 Science Drive 4, Singapore, 117558, Singapore. .
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Źródło :
Nature communications [Nat Commun] 2020 Jun 05; Vol. 11 (1), pp. 2830. Date of Electronic Publication: 2020 Jun 05.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Cell Polarity*
Fungal Proteins/*metabolism
Myosin Type V/*metabolism
Neurospora crassa/*metabolism
Secretory Vesicles/*metabolism
Fungal Proteins/chemistry ; Hyphae/cytology ; Hyphae/metabolism ; Myosin Type V/chemistry ; Neurospora crassa/cytology ; Nuclear Magnetic Resonance, Biomolecular ; Protein Domains ; Protein Interaction Maps
Czasopismo naukowe
Tytuł :
Identification of a PRC2 Accessory Subunit Required for Subtelomeric H3K27 Methylation in Neurospora crassa.
Autorzy :
McNaught KJ; Institute of Molecular Biology, University of Oregon, Eugene, Oregon, USA.
Wiles ET; Institute of Molecular Biology, University of Oregon, Eugene, Oregon, USA.
Selker EU; Institute of Molecular Biology, University of Oregon, Eugene, Oregon, USA .
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Źródło :
Molecular and cellular biology [Mol Cell Biol] 2020 May 14; Vol. 40 (11). Date of Electronic Publication: 2020 May 14 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Histones/*metabolism
Neurospora crassa/*metabolism
Polycomb Repressive Complex 2/*metabolism
Protozoan Proteins/*metabolism
Gene Deletion ; Lysine/metabolism ; Methylation ; Neurospora crassa/genetics ; Polycomb Repressive Complex 2/genetics ; Protein Subunits/genetics ; Protein Subunits/metabolism ; Protozoan Proteins/genetics
Czasopismo naukowe
Tytuł :
The regulatory and transcriptional landscape associated with carbon utilization in a filamentous fungus.
Autorzy :
Wu VW; Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720.; Energy Biosciences Institute, University of California, Berkeley, CA 94704.
Thieme N; Holzforschung München, Technical University of Munich School of Life Sciences Weihenstephan, Technical University of Munich, 85354 Freising, Germany.
Huberman LB; Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720.; Energy Biosciences Institute, University of California, Berkeley, CA 94704.
Dietschmann A; Holzforschung München, Technical University of Munich School of Life Sciences Weihenstephan, Technical University of Munich, 85354 Freising, Germany.
Kowbel DJ; Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720.
Lee J; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Calhoun S; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Singan VR; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Lipzen A; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Xiong Y; Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720.; Energy Biosciences Institute, University of California, Berkeley, CA 94704.
Monti R; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Blow MJ; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
O'Malley RC; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Grigoriev IV; Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720.; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Benz JP; Holzforschung München, Technical University of Munich School of Life Sciences Weihenstephan, Technical University of Munich, 85354 Freising, Germany.
Glass NL; Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720; .; Energy Biosciences Institute, University of California, Berkeley, CA 94704.; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
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Źródło :
Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2020 Mar 17; Vol. 117 (11), pp. 6003-6013. Date of Electronic Publication: 2020 Feb 28.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Cell Wall/*metabolism
Fungal Proteins/*metabolism
Neurospora crassa/*genetics
Pectins/*metabolism
Polysaccharides/*metabolism
Transcription Factors/*metabolism
Biofuels ; Biomass ; Catabolite Repression ; Cell Wall/chemistry ; Gene Expression Regulation, Fungal ; Metabolic Engineering/methods ; Metabolic Networks and Pathways/genetics ; Neurospora crassa/metabolism ; RNA-Seq
Czasopismo naukowe
Tytuł :
Conidiation in Neurospora crassa: vegetative reproduction by a model fungus.
Autorzy :
Ruger-Herreros C; Center for Molecular Biology of the University of Heidelberg (ZMBH), (DKFZ-ZMBH Alliance), Im Neuenheimer Feld 282, 69120, Heidelberg, Germany. .; German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, 69120, Heidelberg, Germany. .
Corrochano LM; Departamento de Genética, Facultad de Biología, Universidad de Sevilla, Apartado 1095, 41080, Sevilla, Spain.
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Źródło :
International microbiology : the official journal of the Spanish Society for Microbiology [Int Microbiol] 2020 Jan; Vol. 23 (1), pp. 97-105. Date of Electronic Publication: 2019 Jun 06.
Typ publikacji :
Journal Article; Review
MeSH Terms :
Reproduction*
Neurospora crassa/*physiology
Spores, Fungal/*physiology
Gene Expression Regulation, Fungal ; Neurospora crassa/cytology ; Neurospora crassa/ultrastructure ; Signal Transduction ; Spores, Fungal/cytology ; Spores, Fungal/ultrastructure ; Transcription, Genetic
Czasopismo naukowe
Tytuł :
Programmed Cell Death in Neurospora crassa Is Controlled by the Allorecognition Determinant rcd-1 .
Autorzy :
Daskalov A; Plant and Microbial Biology Department, The University of California, Berkeley, California 94720.
Gladieux P; UMR BGPI, INRA, CIRAD, Montpellier SupAgro, University Montpellier, 34060, France.
Heller J; Plant and Microbial Biology Department, The University of California, Berkeley, California 94720.; Environmental Genomics and Systems Biology Division, The Lawrence Berkeley National Laboratory, California 94720.
Glass NL; Plant and Microbial Biology Department, The University of California, Berkeley, California 94720 .; Environmental Genomics and Systems Biology Division, The Lawrence Berkeley National Laboratory, California 94720.
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Źródło :
Genetics [Genetics] 2019 Dec; Vol. 213 (4), pp. 1387-1400. Date of Electronic Publication: 2019 Oct 21.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Apoptosis*
Fungal Proteins/*metabolism
Neurospora crassa/*cytology
Neurospora crassa/*metabolism
Amino Acid Sequence ; Chromosome Segregation/genetics ; Evolution, Molecular ; Fungal Proteins/chemistry ; Fungal Proteins/genetics ; Gene Rearrangement ; Genes, Fungal ; Neurospora crassa/genetics ; Phylogeny ; Polymorphism, Genetic
Czasopismo naukowe
Tytuł :
Regulation of the thiamine pyrophosphate (TPP)-sensing riboswitch in NMT1 mRNA from Neurospora crassa.
Autorzy :
Gong S; College of Mathematics and Physics, Huanggang Normal University, China.
Du C; College of Mathematics and Physics, Huanggang Normal University, China.
Wang Y; Department of Physics, Wuhan University, China.
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Źródło :
FEBS letters [FEBS Lett] 2020 Feb; Vol. 594 (4), pp. 625-635. Date of Electronic Publication: 2019 Nov 13.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Methyltransferases/*genetics
Neurospora crassa/*genetics
Riboswitch/*genetics
Thiamine Pyrophosphate/*metabolism
Aptamers, Nucleotide/metabolism ; Neurospora crassa/enzymology ; Transcription, Genetic
Czasopismo naukowe
Tytuł :
Influence of Lytic Polysaccharide Monooxygenase Active Site Segments on Activity and Affinity.
Autorzy :
Laurent CVFP; Biocatalysis and Biosensing Laboratory, Department of Food Science and Technology, BOKU-University of Natural Resources and Life Sciences, Vienna, Muthgasse 18, 1190 Vienna, Austria.; Institute of Molecular Modeling and Simulation, Department of Material Sciences and Process Engineering BOKU-University of Natural Resources and Life Sciences, Vienna, Muthgasse 18, 1190 Vienna, Austria.
Sun P; Laboratory of Food Chemistry, Wageningen University & Research, Bornse Weilanden 9, 6708 WG Wageningen, The Netherlands.
Scheiblbrandner S; Biocatalysis and Biosensing Laboratory, Department of Food Science and Technology, BOKU-University of Natural Resources and Life Sciences, Vienna, Muthgasse 18, 1190 Vienna, Austria.
Csarman F; Biocatalysis and Biosensing Laboratory, Department of Food Science and Technology, BOKU-University of Natural Resources and Life Sciences, Vienna, Muthgasse 18, 1190 Vienna, Austria.
Cannazza P; Biocatalysis and Biosensing Laboratory, Department of Food Science and Technology, BOKU-University of Natural Resources and Life Sciences, Vienna, Muthgasse 18, 1190 Vienna, Austria.; Department of Food, Environmental and Nutritional Sciences (DeFENS), Università degli Studi di Milano, Via Mangiagalli 25, 20133 Milano, Italy.
Frommhagen M; Laboratory of Food Chemistry, Wageningen University & Research, Bornse Weilanden 9, 6708 WG Wageningen, The Netherlands.
van Berkel WJH; Laboratory of Food Chemistry, Wageningen University & Research, Bornse Weilanden 9, 6708 WG Wageningen, The Netherlands.
Oostenbrink C; Institute of Molecular Modeling and Simulation, Department of Material Sciences and Process Engineering BOKU-University of Natural Resources and Life Sciences, Vienna, Muthgasse 18, 1190 Vienna, Austria.
Kabel MA; Laboratory of Food Chemistry, Wageningen University & Research, Bornse Weilanden 9, 6708 WG Wageningen, The Netherlands.
Ludwig R; Biocatalysis and Biosensing Laboratory, Department of Food Science and Technology, BOKU-University of Natural Resources and Life Sciences, Vienna, Muthgasse 18, 1190 Vienna, Austria.
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Źródło :
International journal of molecular sciences [Int J Mol Sci] 2019 Dec 10; Vol. 20 (24). Date of Electronic Publication: 2019 Dec 10.
Typ publikacji :
Journal Article
MeSH Terms :
Mixed Function Oxygenases/*chemistry
Mixed Function Oxygenases/*metabolism
Neurospora crassa/*enzymology
Binding Sites ; Carboxymethylcellulose Sodium/metabolism ; Catalytic Domain ; Cellulose/metabolism ; Fungal Proteins/chemistry ; Fungal Proteins/genetics ; Fungal Proteins/metabolism ; Glucans/metabolism ; Mixed Function Oxygenases/genetics ; Neurospora crassa/genetics ; Sequence Deletion ; Surface Plasmon Resonance ; Xylans/metabolism
Czasopismo naukowe
Tytuł :
Increased reactive oxygen species production and maintenance of membrane potential in VDAC-less Neurospora crassa mitochondria.
Autorzy :
Shuvo SR; Department of Microbiology, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada.; Department of Biochemistry and Microbiology, North South University Dhaka, Dhaka, Bangladesh.
Wiens LM; Department of Biological Sciences, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada.
Subramaniam S; Department of Microbiology, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada.
Treberg JR; Department of Biological Sciences, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada.; Department of Food and Human Nutritional Sciences, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada.
Court DA; Department of Microbiology, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada. .
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Źródło :
Journal of bioenergetics and biomembranes [J Bioenerg Biomembr] 2019 Oct; Vol. 51 (5), pp. 341-354. Date of Electronic Publication: 2019 Aug 07.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Membrane Potentials*
Mitochondria/*metabolism
Neurospora crassa/*ultrastructure
Reactive Oxygen Species/*metabolism
Voltage-Dependent Anion Channels/*deficiency
Electron Transport Complex I/metabolism ; Electron Transport Complex II/metabolism ; Energy Metabolism ; Mitochondrial Membranes/metabolism ; Mitochondrial Proteins/metabolism ; Neurospora crassa/enzymology ; Neurospora crassa/metabolism ; Oxidoreductases/metabolism ; Oxygen Consumption ; Plant Proteins/metabolism
Czasopismo naukowe
Tytuł :
Role and dynamics of an agmatinase-like protein (AGM-1) in Neurospora crassa.
Autorzy :
Pérez-Mozqueda LL; Departamento de Microbiología, Centro de Investigación Científica y de Educación Superior de Ensenada (CICESE), Ensenada, B.C., Mexico.
Vazquez-Duhalt R; Centro de Nanociencias y Nanotecnología (CNyN), Universidad Nacional Autónoma de México (UNAM), Ensenada, Mexico.
Castro-Longoria E; Departamento de Microbiología, Centro de Investigación Científica y de Educación Superior de Ensenada (CICESE), Ensenada, B.C., Mexico. Electronic address: .
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Źródło :
Fungal genetics and biology : FG & B [Fungal Genet Biol] 2019 Nov; Vol. 132, pp. 103264. Date of Electronic Publication: 2019 Aug 26.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Agmatine/*metabolism
Fungal Proteins/*metabolism
Neurospora crassa/*enzymology
Ureohydrolases/*metabolism
Actin Cytoskeleton/metabolism ; Actins/genetics ; Actins/metabolism ; Fungal Proteins/genetics ; Hydrolysis ; Hyphae/metabolism ; Neurospora crassa/genetics ; Neurospora crassa/physiology ; Ureohydrolases/genetics
Czasopismo naukowe
Tytuł :
Genetic relationships between the RACK1 homolog cpc-2 and heterotrimeric G protein subunit genes in Neurospora crassa.
Autorzy :
Garud A; Department of Microbiology and Plant Pathology, University of California, Riverside, California, United States of America.
Carrillo AJ; Department of Microbiology and Plant Pathology, University of California, Riverside, California, United States of America.
Collier LA; Department of Microbiology and Plant Pathology, University of California, Riverside, California, United States of America.
Ghosh A; Department of Microbiology and Plant Pathology, University of California, Riverside, California, United States of America.
Kim JD; Department of Microbiology and Plant Pathology, University of California, Riverside, California, United States of America.
Lopez-Lopez B; Department of Microbiology and Plant Pathology, University of California, Riverside, California, United States of America.
Ouyang S; Department of Microbiology and Plant Pathology, University of California, Riverside, California, United States of America.
Borkovich KA; Department of Microbiology and Plant Pathology, University of California, Riverside, California, United States of America.
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Źródło :
PloS one [PLoS One] 2019 Oct 03; Vol. 14 (10), pp. e0223334. Date of Electronic Publication: 2019 Oct 03 (Print Publication: 2019).
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Heterotrimeric GTP-Binding Proteins/*genetics
Neurospora crassa/*genetics
rho-Associated Kinases/*genetics
Genes, Fungal ; Heterotrimeric GTP-Binding Proteins/chemistry ; Heterotrimeric GTP-Binding Proteins/metabolism ; Models, Biological ; Mutation ; Neurospora crassa/classification ; Neurospora crassa/immunology ; Phenotype ; Phylogeny ; Protein Binding ; Recombinant Proteins ; rho-Associated Kinases/chemistry ; rho-Associated Kinases/metabolism
Czasopismo naukowe
Tytuł :
Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Autorzy :
Itoh Y; Science for Life Laboratory, Department of Biochemistry and Biophysics, Stockholm University, 17165, Solna, Sweden.; Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 17165, Solna, Sweden.
Naschberger A; Science for Life Laboratory, Department of Biochemistry and Biophysics, Stockholm University, 17165, Solna, Sweden.
Mortezaei N; Science for Life Laboratory, Department of Biochemistry and Biophysics, Stockholm University, 17165, Solna, Sweden.
Herrmann JM; Cell Biology, University of Kaiserslautern, Erwin-Schrödinger-Straße 13, 67663, Kaiserslautern, Germany.
Amunts A; Science for Life Laboratory, Department of Biochemistry and Biophysics, Stockholm University, 17165, Solna, Sweden. .; Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 17165, Solna, Sweden. .
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Źródło :
Nature communications [Nat Commun] 2020 Oct 14; Vol. 11 (1), pp. 5187. Date of Electronic Publication: 2020 Oct 14.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Protein Biosynthesis*
Mitochondria/*metabolism
Mitochondrial Ribosomes/*metabolism
Neurospora crassa/*physiology
Cell Fractionation ; Cryoelectron Microscopy ; Fungal Proteins/metabolism ; Mitochondria/ultrastructure ; Mitochondrial Proteins/metabolism ; Mitochondrial Ribosomes/ultrastructure ; Models, Molecular ; NAD/metabolism ; Proteins/metabolism ; RNA, Messenger/metabolism ; RNA, Ribosomal/metabolism ; RNA, Transfer/metabolism ; Ribosomal Proteins/metabolism
Czasopismo naukowe
Tytuł :
LSD1 prevents aberrant heterochromatin formation in Neurospora crassa.
Autorzy :
Storck WK; Institute of Molecular Biology, University of Oregon, Eugene, OR 97403, USA.
Bicocca VT; Institute of Molecular Biology, University of Oregon, Eugene, OR 97403, USA.
Rountree MR; Institute of Molecular Biology, University of Oregon, Eugene, OR 97403, USA.
Honda S; Faculty of Medical Sciences, University of Fukui, Fukui 910-1193, Japan.
Ormsby T; Institute of Molecular Biology, University of Oregon, Eugene, OR 97403, USA.
Selker EU; Institute of Molecular Biology, University of Oregon, Eugene, OR 97403, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2020 Oct 09; Vol. 48 (18), pp. 10199-10210.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Fungal Proteins/*metabolism
Heterochromatin/*metabolism
Histone-Lysine N-Methyltransferase/*metabolism
Neurospora crassa/*metabolism
Antigens, Nuclear/metabolism ; Chromatin Assembly and Disassembly ; DNA Methylation ; Histones/metabolism ; Nerve Tissue Proteins/metabolism ; Polycomb-Group Proteins/metabolism ; Transcription Factors/metabolism
Czasopismo naukowe
Tytuł :
NC2 complex is a key factor for the activation of catalase-3 transcription by regulating H2A.Z deposition.
Autorzy :
Cui G; State Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing 100193, China.
Dong Q; State Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing 100193, China.
Duan J; State Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing 100193, China.
Zhang C; State Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing 100193, China.
Liu X; State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.; College of Life Sciences, University of the Chinese Academy of Sciences, Beijing 100049, China.
He Q; State Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing 100193, China.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2020 Sep 04; Vol. 48 (15), pp. 8332-8348.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Transcription, Genetic*
Catalase/*genetics
Phosphoproteins/*genetics
Transcription Factors/*genetics
Cell Nucleus/genetics ; Chromatin Assembly and Disassembly/genetics ; Gene Expression Regulation/genetics ; Genes, MHC Class II/genetics ; Histones/genetics ; Neurospora crassa/genetics ; Nucleosomes/genetics ; Nucleosomes/ultrastructure ; Phosphoproteins/ultrastructure ; Protein Binding/genetics ; Transcription Factors/ultrastructure ; Transcriptional Activation/genetics
Czasopismo naukowe
Tytuł :
Codon usage bias affects α-amylase mRNA level by altering RNA stability and cytosine methylation patterns in Escherichia coli .
Autorzy :
Xing Y; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, P.R. China.; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, P.R. China.
Gong R; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, P.R. China.; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, P.R. China.
Xu Y; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, P.R. China.; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, P.R. China.
Liu K; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, P.R. China.; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, P.R. China.
Zhou M; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, P.R. China.; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, P.R. China.
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Źródło :
Canadian journal of microbiology [Can J Microbiol] 2020 Sep; Vol. 66 (9), pp. 521-528. Date of Electronic Publication: 2020 Apr 07.
Typ publikacji :
Journal Article
MeSH Terms :
Codon Usage*
DNA Methylation*
Cytosine/*metabolism
Escherichia coli/*genetics
RNA, Bacterial/*genetics
RNA, Messenger/*genetics
alpha-Amylases/*genetics
Codon ; Neurospora crassa/genetics ; RNA Stability ; alpha-Amylases/metabolism
Czasopismo naukowe
Tytuł :
FRQ-CK1 interaction determines the period of circadian rhythms in Neurospora.
Autorzy :
Liu X; Department of Physiology, University of Texas Southwestern Medical Center, Dallas, TX, 75390-9040, USA.; State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
Chen A; Department of Physiology, University of Texas Southwestern Medical Center, Dallas, TX, 75390-9040, USA.; Key Laboratory of Biopesticides and Chemical Biology, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, Fujian, 350002, China.
Caicedo-Casso A; Department of Mathematics, Universidad del Valle, Cali, 760032, Colombia.
Cui G; State Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing, 100193, China.
Du M; Department of Physiology, University of Texas Southwestern Medical Center, Dallas, TX, 75390-9040, USA.
He Q; State Key Laboratory of Agrobiotechnology and MOA Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing, 100193, China.
Lim S; Department of Mathematical Sciences, University of Cincinnati, Cincinnati, 45221, USA.
Kim HJ; Division of Statistics and Data Science, University of Cincinnati, Cincinnati, 45221, USA.
Hong CI; Department of Pharmacology and Systems Physiology, University of Cincinnati, Cincinnati, OH, 45267, USA.; Division of Developmental Biology, Cincinnati Children's Hospital Medical Center, 3333, Burnet Avenue, Cincinnati, USA.
Liu Y; Department of Physiology, University of Texas Southwestern Medical Center, Dallas, TX, 75390-9040, USA. .
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Źródło :
Nature communications [Nat Commun] 2019 Sep 25; Vol. 10 (1), pp. 4352. Date of Electronic Publication: 2019 Sep 25.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Casein Kinase I/*genetics
Circadian Rhythm/*genetics
Fungal Proteins/*genetics
Neurospora crassa/*genetics
Casein Kinase I/metabolism ; Circadian Clocks/genetics ; Feedback, Physiological ; Fungal Proteins/metabolism ; Mutation ; Neurospora crassa/metabolism ; Phosphorylation ; Protein Binding ; Time Factors
Czasopismo naukowe
Tytuł :
Crosstalk of Cellulose and Mannan Perception Pathways Leads to Inhibition of Cellulase Production in Several Filamentous Fungi.
Autorzy :
Hassan L; TUM School of Life Sciences Weihenstephan, Technical University of Munich, Freising, Germany.
Lin L; Key Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Sorek H; Energy Biosciences Institute, Berkeley, California, USA.
Sperl LE; Bavarian NMR Center, Department of Chemistry, Technical University of Munich, Garching, Germany.; TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany.; Institute of Structural Biology, Helmholtz Zentrum München, Neuherberg, Germany.
Goudoulas T; TUM School of Life Sciences Weihenstephan, Technical University of Munich, Freising, Germany.
Hagn F; Bavarian NMR Center, Department of Chemistry, Technical University of Munich, Garching, Germany.; TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany.; Institute of Structural Biology, Helmholtz Zentrum München, Neuherberg, Germany.
Germann N; TUM School of Life Sciences Weihenstephan, Technical University of Munich, Freising, Germany.
Tian C; Key Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Benz JP; TUM School of Life Sciences Weihenstephan, Technical University of Munich, Freising, Germany .; Energy Biosciences Institute, Berkeley, California, USA.
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Źródło :
MBio [mBio] 2019 Jul 02; Vol. 10 (4). Date of Electronic Publication: 2019 Jul 02.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Down-Regulation*
Cellulase/*biosynthesis
Cellulose/*metabolism
Gene Expression Regulation, Fungal/*drug effects
Mannans/*metabolism
Neurospora crassa/*metabolism
Signal Transduction/*drug effects
Catabolite Repression ; Gene Regulatory Networks ; Genomics ; Neurospora crassa/enzymology ; Neurospora crassa/genetics
Czasopismo naukowe
Tytuł :
Control of Development, Secondary Metabolism and Light-Dependent Carotenoid Biosynthesis by the Velvet Complex of Neurospora crassa .
Autorzy :
Bayram ÖS; Department of Biology, Maynooth University, Co. Kildare, W23 F2H6, Ireland.
Dettmann A; Institute for Biology II, Molecular Plant Physiology, Albert-Ludwigs-University 79104 Freiburg, Germany.
Karahoda B; Department of Biology, Maynooth University, Co. Kildare, W23 F2H6, Ireland.
Moloney NM; Department of Biology, Maynooth University, Co. Kildare, W23 F2H6, Ireland.
Ormsby T; Institute of Molecular Biology, University of Oregon, Eugene, 97403 Oregon.
McGowan J; Department of Biology, Maynooth University, Co. Kildare, W23 F2H6, Ireland.
Cea-Sánchez S; Departmento de Genética, Facultad de Biologia, Universidad de Sevilla, 41012 Sevilla, Spain.
Miralles-Durán A; Departmento de Genética, Facultad de Biologia, Universidad de Sevilla, 41012 Sevilla, Spain.
Brancini GTP; Departmento de Genética, Facultad de Biologia, Universidad de Sevilla, 41012 Sevilla, Spain.
Luque EM; Departmento de Genética, Facultad de Biologia, Universidad de Sevilla, 41012 Sevilla, Spain.
Fitzpatrick DA; Department of Biology, Maynooth University, Co. Kildare, W23 F2H6, Ireland.
Cánovas D; Departmento de Genética, Facultad de Biologia, Universidad de Sevilla, 41012 Sevilla, Spain.
Corrochano LM; Departmento de Genética, Facultad de Biologia, Universidad de Sevilla, 41012 Sevilla, Spain.
Doyle S; Department of Biology, Maynooth University, Co. Kildare, W23 F2H6, Ireland.
Selker EU; Institute of Molecular Biology, University of Oregon, Eugene, 97403 Oregon.
Seiler S; Institute for Biology II, Molecular Plant Physiology, Albert-Ludwigs-University 79104 Freiburg, Germany .
Bayram Ö; Department of Biology, Maynooth University, Co. Kildare, W23 F2H6, Ireland .; Human Health Research Institute, Maynooth University, Co. Kildare, W23 F2H6, Ireland.
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Źródło :
Genetics [Genetics] 2019 Jul; Vol. 212 (3), pp. 691-710. Date of Electronic Publication: 2019 May 08.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Gene Expression Regulation, Fungal*
Carotenoids/*metabolism
Fungal Proteins/*metabolism
Neurospora crassa/*genetics
Spores, Fungal/*genetics
Active Transport, Cell Nucleus ; Cell Nucleus/metabolism ; Fungal Proteins/genetics ; Light ; Methyltransferases/genetics ; Methyltransferases/metabolism ; Neurospora crassa/metabolism ; Neurospora crassa/physiology ; Neurospora crassa/radiation effects ; Protein Multimerization ; Spores, Fungal/physiology ; Transcription Factors/genetics ; Transcription Factors/metabolism
Czasopismo naukowe
Tytuł :
What is Phase in Cellular Clocks?
Autorzy :
Caranica C; Department of Statistics, University of Georgia, Athens, GA.
Cheong JH; School of Electrical and Computer Engineering, College of Engineering, University of Georgia, Athens, GA.
Qiu X; Institute of Bioinformatics, University of Georgia, Athens, GA.
Krach EK; Genetics Department, University of Georgia, Athens, GA.
Deng Z; Department of Genome Sciences, University of Washington, Seattle, WA.
Mao L; School of Electrical and Computer Engineering, College of Engineering, University of Georgia, Athens, GA.
Schüttler HB; Department of Physics and Astronomy, University of Georgia, Athens, GA.
Arnold J; Genetics Department, University of Georgia, Athens, GA.
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Źródło :
The Yale journal of biology and medicine [Yale J Biol Med] 2019 Jun 27; Vol. 92 (2), pp. 169-178. Date of Electronic Publication: 2019 Jun 27 (Print Publication: 2019).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Biological Clocks/*physiology
Circadian Clocks/*physiology
Circadian Rhythm/*physiology
Neurospora crassa/*physiology
Single-Cell Analysis/*methods
Algorithms ; Biological Clocks/genetics ; Fungal Proteins/genetics ; Gene Expression Regulation, Fungal ; Luminescent Measurements/methods ; Models, Biological ; Neurospora crassa/cytology ; Neurospora crassa/metabolism ; Stochastic Processes ; Time Factors
Czasopismo naukowe

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