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Tytuł :
Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits.
Autorzy :
Miyauchi S; Université de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l' environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.
Kiss E; Synthetic and Systems Biology Unit, Biological Research Centre, 6726, Szeged, Hungary.
Kuo A; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Drula E; INRAE, USC1408 Architecture et Fonction des Macromolécules Biologiques, 13009, Marseille, France.
Kohler A; Université de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l' environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.
Sánchez-García M; Biology Department, Clark University, Lasry Center for Bioscience, 950 Main Street, Worcester, MA, 01610, USA.
Morin E; Université de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l' environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.
Andreopoulos B; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Barry KW; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Bonito G; Plant Soil and Microbial Sciences, Michigan State University, East Lansing, MI, 48824, USA.
Buée M; Université de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l' environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.
Carver A; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Chen C; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Cichocki N; Université de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l' environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.
Clum A; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Culley D; Chemical & Biological Processes Development Group, Pacific Northwest National Laboratory, Richland, WA, USA.
Crous PW; Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT, Utrecht, Netherlands.
Fauchery L; Université de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l' environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.
Girlanda M; Department of Life Sciences and Systems Biology, University of Torino, Viale Mattioli 25, 10125, Torino, Italy.
Hayes RD; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Kéri Z; Synthetic and Systems Biology Unit, Biological Research Centre, 6726, Szeged, Hungary.
LaButti K; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Lipzen A; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Lombard V; INRAE, USC1408 Architecture et Fonction des Macromolécules Biologiques, 13009, Marseille, France.
Magnuson J; Chemical & Biological Processes Development Group, Pacific Northwest National Laboratory, Richland, WA, USA.
Maillard F; Université de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l' environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.
Murat C; Université de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l' environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.
Nolan M; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Ohm RA; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Pangilinan J; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Pereira MF; Université de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l' environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.
Perotto S; Department of Life Sciences and Systems Biology, University of Torino, Viale Mattioli 25, 10125, Torino, Italy.
Peter M; Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Zuercherstrasse 111, 8903, Birmensdorf, Switzerland.
Pfister S; Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Zuercherstrasse 111, 8903, Birmensdorf, Switzerland.
Riley R; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Sitrit Y; The Jacob Blaustein Institutes for Desert Research, Bergman Campus, Ben-Gurion University of The Negev, Beer-Sheva, Israel.
Stielow JB; Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT, Utrecht, Netherlands.
Szöllősi G; Synthetic and Systems Biology Unit, Biological Research Centre, 6726, Szeged, Hungary.
Žifčáková L; Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences, Videnska 1083, 14220, Praha 4, Czech Republic.
Štursová M; Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences, Videnska 1083, 14220, Praha 4, Czech Republic.
Spatafora JW; Department Botany & Plant Pathology, Oregon State University, Corvallis, OR, USA.
Tedersoo L; Natural History Museum, University of Tartu, 14a Ravila, 50411, Tartu, Estonia.
Vaario LM; Department of Forest Sciences, University of Helsinki, Helsinki, Finland.
Yamada A; Institute of Mountain Science, Faculty of Agriculture, Shinshu University, Minami-minowa, Kami-ina, Nagano, 399-4598, Japan.
Yan M; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Wang P; Department of Key Laboratory, The 2nd Affiliated Hospital of Kunming Medical University, 374 Dian Mian Road, Kunming, 650101, Yunnan, China.
Xu J; Department of Biology, McMaster University, 1280 Main St. West, Hamilton, ON, L8S 4K1, Canada.
Bruns T; Department of Plant and Microbial Biology, University of California - Berkeley, Berkeley, CA, USA.
Baldrian P; Laboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences, Videnska 1083, 14220, Praha 4, Czech Republic.
Vilgalys R; Department of Biology, Duke University, Durham, NC, 27708, USA.
Dunand C; Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, Toulouse, France.
Henrissat B; INRAE, USC1408 Architecture et Fonction des Macromolécules Biologiques, 13009, Marseille, France.; Architecture et Fonction des Macromolécules Biologiques (AFMB), CNRS, Aix-Marseille Univ., 13009, Marseille, France.; Department of Biological Sciences, King Abdulaziz University, Jeddah, Saudi Arabia.
Grigoriev IV; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.; Department of Plant and Microbial Biology, University of California - Berkeley, Berkeley, CA, USA.
Hibbett D; Biology Department, Clark University, Lasry Center for Bioscience, 950 Main Street, Worcester, MA, 01610, USA.
Nagy LG; Synthetic and Systems Biology Unit, Biological Research Centre, 6726, Szeged, Hungary.
Martin FM; Université de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l' environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France. .; Beijing Advanced Innovation Centre for Tree Breeding by Molecular Design (BAIC-TBMD), Institute of Microbiology, Beijing Forestry University, Tsinghua East Road Haidian District, Beijing, China. .
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Źródło :
Nature communications [Nat Commun] 2020 Oct 12; Vol. 11 (1), pp. 5125. Date of Electronic Publication: 2020 Oct 12.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Genome, Fungal*
Symbiosis*
Fungi/*genetics
Mycorrhizae/*genetics
Ecosystem ; Evolution, Molecular ; Fungal Proteins/genetics ; Fungi/classification ; Fungi/physiology ; Mycorrhizae/classification ; Mycorrhizae/physiology ; Phylogeny ; Plant Physiological Phenomena ; Plants/microbiology
Czasopismo naukowe
Tytuł :
Fine-scale spatial distribution of orchid mycorrhizal fungi in the soil of host-rich grasslands.
Autorzy :
Voyron S; Department of Life Sciences and Systems Biology, University of Torino, Viale Mattioli 25, 10125, Torino, Italy.
Ercole E; Department of Life Sciences and Systems Biology, University of Torino, Viale Mattioli 25, 10125, Torino, Italy.
Ghignone S; CNR-Istituto per la Protezione Sostenibile delle Piante, UOS Turin (CNR-IPSP), Viale Mattioli 25, 10125, Torino, Italy.
Perotto S; Department of Life Sciences and Systems Biology, University of Torino, Viale Mattioli 25, 10125, Torino, Italy.; CNR-Istituto per la Protezione Sostenibile delle Piante, UOS Turin (CNR-IPSP), Viale Mattioli 25, 10125, Torino, Italy.
Girlanda M; Department of Life Sciences and Systems Biology, University of Torino, Viale Mattioli 25, 10125, Torino, Italy.; CNR-Istituto per la Protezione Sostenibile delle Piante, UOS Turin (CNR-IPSP), Viale Mattioli 25, 10125, Torino, Italy.
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Źródło :
The New phytologist [New Phytol] 2017 Feb; Vol. 213 (3), pp. 1428-1439. Date of Electronic Publication: 2016 Nov 15.
Typ publikacji :
Journal Article
MeSH Terms :
Grassland*
Soil Microbiology*
Fungi/*physiology
Mycorrhizae/*physiology
Orchidaceae/*microbiology
Biodiversity ; Plant Roots/microbiology ; Species Specificity
Czasopismo naukowe
Tytuł :
Model systems to unravel the molecular mechanisms of heavy metal tolerance in the ericoid mycorrhizal symbiosis.
Autorzy :
Daghino S; Department of Life Sciences and Systems Biology, University of Turin, Viale Mattioli 25, 10125, Turin, Italy.
Martino E; Department of Life Sciences and Systems Biology, University of Turin, Viale Mattioli 25, 10125, Turin, Italy.
Perotto S; Department of Life Sciences and Systems Biology, University of Turin, Viale Mattioli 25, 10125, Turin, Italy. silvia.perotto@unito.it.
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Źródło :
Mycorrhiza [Mycorrhiza] 2016 May; Vol. 26 (4), pp. 263-74. Date of Electronic Publication: 2015 Dec 28.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Review
MeSH Terms :
Symbiosis*
Ericaceae/*microbiology
Fungi/*physiology
Metals, Heavy/*metabolism
Mycorrhizae/*physiology
Ericaceae/physiology ; Fungal Proteins/chemistry ; Fungal Proteins/genetics ; Fungal Proteins/metabolism ; Fungi/chemistry ; Fungi/genetics ; Fungi/isolation & purification ; Models, Biological ; Mycorrhizae/chemistry ; Mycorrhizae/genetics ; Mycorrhizae/isolation & purification ; Proteomics
Czasopismo naukowe
Tytuł :
Fungal diversity is not determined by mineral and chemical differences in serpentine substrates.
Autorzy :
Daghino S; Department of Life Sciences and Systems Biology, University of Torino, Torino, Italy. />Murat C
Sizzano E
Girlanda M
Perotto S
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Źródło :
PloS one [PLoS One] 2012; Vol. 7 (9), pp. e44233. Date of Electronic Publication: 2012 Sep 20.
Typ publikacji :
Journal Article
MeSH Terms :
Biodiversity*
Soil Microbiology*
Asbestos, Serpentine/*chemistry
Fungi/*classification
DNA, Fungal ; DNA, Intergenic ; Fungi/genetics ; Fungi/isolation & purification ; Phylogeny ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Indigenous microfungi and plants reduce soil nonylphenol contamination and stimulate resident microfungal communities.
Autorzy :
Girlanda M; Department of Plant Biology, Centre of Excellence for Plant and Microbial Biosensing (CEBIOVEM), University of Torino, Viale Mattioli 25, 10125 Turin, Italy. />Favero-Longo SE
Lazzari A
Segreto R
Perotto S
Siniscalco C
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Źródło :
Applied microbiology and biotechnology [Appl Microbiol Biotechnol] 2009 Feb; Vol. 82 (2), pp. 359-70. Date of Electronic Publication: 2009 Jan 10.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Soil Microbiology*
Fungi/*metabolism
Phenols/*metabolism
Plants/*metabolism
Soil Pollutants/*metabolism
Biodegradation, Environmental ; Biodiversity ; Fungi/growth & development ; Phenols/chemistry ; Plant Development ; Soil Pollutants/chemistry
Czasopismo naukowe
Tytuł :
Bioweathering of chrysotile by fungi isolated in ophiolitic sites.
Autorzy :
Daghino S; Interdepartmental Centre G. Scansetti for Studies on Asbestos and Other Toxic Particulates, University of Torino, Torino, Italy.
Martino E
Vurro E
Tomatis M
Girlanda M
Fubini B
Perotto S
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Źródło :
FEMS microbiology letters [FEMS Microbiol Lett] 2008 Aug; Vol. 285 (2), pp. 242-9.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Asbestos, Serpentine/*metabolism
Fungi/*classification
Fungi/*metabolism
Aspergillus fumigatus/metabolism ; Chelating Agents/metabolism ; Fungi/isolation & purification ; Iron/metabolism ; Paecilomyces/metabolism ; Siderophores/biosynthesis ; Verticillium/metabolism
Czasopismo naukowe
Tytuł :
Soil fungal hyphae bind and attack asbestos fibers.
Autorzy :
Martino E; Interdepartmental Center G. Scansetti for Studies on Asbestos and Other Toxic Particulates, University of Torino, Dipartimento Biologia Vegetale, via le Mattioli 25, 10125 Torino, Italy.
Prandi L
Fenoglio I
Bonfante P
Perotto S
Fubini B
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Źródło :
Angewandte Chemie (International ed. in English) [Angew Chem Int Ed Engl] 2003 Jan 13; Vol. 42 (2), pp. 219-22.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Asbestos*
Soil Microbiology*
Fungi/*physiology
Hyphae/*physiology
Cell Adhesion ; Fungi/ultrastructure ; Geography ; Hyphae/ultrastructure ; Microscopy, Electron, Scanning
Czasopismo naukowe
Tytuł :
Influence of zinc ions on protein secretion in a heavy metal tolerant strain of the ericoid mycorrhizal fungus Oidiodendron maius.
Autorzy :
Martino E; Dipartimento di Biologia Vegetale dell'Università di Torino, Italy.
Franco B
Piccoli G
Stocchi V
Perotto S
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Źródło :
Molecular and cellular biochemistry [Mol Cell Biochem] 2002 Feb; Vol. 231 (1-2), pp. 179-85.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Fungal Proteins/*metabolism
Fungi/*drug effects
Zinc/*pharmacology
Amino Acid Sequence ; Cations, Divalent/pharmacology ; Fungal Proteins/chemistry ; Fungi/enzymology ; Gene Expression Regulation, Fungal/drug effects ; Isoelectric Point ; Molecular Sequence Data ; Molecular Weight ; Sequence Analysis, Protein
Czasopismo naukowe
Tytuł :
Impact of biocontrol Pseudomonas fluorescens CHA0 and a genetically modified derivative on the diversity of culturable fungi in the cucumber rhizosphere.
Autorzy :
Girlanda M; Dipartimento di Biologia Vegetale and CSMT-CNR, Viale P.A. Mattioli 25, 10125 Torino, Italy. />Perotto S
Moenne-Loccoz Y
Bergero R
Lazzari A
Defago G
Bonfante P
Luppi AM
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Źródło :
Applied and environmental microbiology [Appl Environ Microbiol] 2001 Apr; Vol. 67 (4), pp. 1851-64.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Pest Control, Biological*
Soil Microbiology*
Cucumis sativus/*microbiology
Fungi/*growth & development
Plant Roots/*microbiology
Pseudomonas fluorescens/*growth & development
Alanine/administration & dosage ; Alanine/analogs & derivatives ; Cucumis sativus/drug effects ; Fungi/classification ; Fungi/drug effects ; Fungi/pathogenicity ; Fungicides, Industrial/administration & dosage ; Genetic Engineering ; Plant Diseases/microbiology ; Pseudomonas fluorescens/genetics ; Pseudomonas fluorescens/metabolism
Czasopismo naukowe
Tytuł :
Mucoid mutants of the biocontrol strain pseudomonas fluorescens CHA0 show increased ability in biofilm formation on mycorrhizal and nonmycorrhizal carrot roots.
Autorzy :
Bianciotto V; Centro di Studio sulla Micologia del Terreno-CNR, Torino, Italy.
Andreotti S
Balestrini R
Bonfante P
Perotto S
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Źródło :
Molecular plant-microbe interactions : MPMI [Mol Plant Microbe Interact] 2001 Feb; Vol. 14 (2), pp. 255-60.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Mutation*
Pest Control, Biological*
Fungi/*isolation & purification
Pseudomonas fluorescens/*physiology
Vegetables/*microbiology
Biofilms ; Microscopy, Electron ; Plant Roots/microbiology ; Pseudomonas fluorescens/genetics ; Pseudomonas fluorescens/ultrastructure
Czasopismo naukowe
Tytuł :
Extracellular polysaccharides are involved in the attachment of Azospirillum brasilense and Rhizobium leguminosarum to arbuscular mycorrhizal structures.
Autorzy :
Bianciotto V; Centro di Studio sulla Micologia del Terreno-CNR, Torino, Italy.
Andreotti S
Balestrini R
Bonfante P
Perotto S
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Źródło :
European journal of histochemistry : EJH [Eur J Histochem] 2001; Vol. 45 (1), pp. 39-49.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Attachment Sites, Microbiological/*genetics
Azospirillum brasilense/*genetics
Bacterial Adhesion/*genetics
Fungi/*physiology
Polysaccharides, Bacterial/*genetics
Rhizobium leguminosarum/*genetics
Azospirillum brasilense/classification ; In Vitro Techniques ; Microscopy, Confocal ; Rhizobium leguminosarum/classification
Czasopismo naukowe
Tytuł :
Detection and identification of bacterial endosymbionts in arbuscular mycorrhizal fungi belonging to the family Gigasporaceae.
Autorzy :
Bianciotto V; Centro Studio Micologia del Terreno-CNR, 10125 Turin, Italy.
Lumini E
Lanfranco L
Minerdi D
Bonfante P
Perotto S
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Źródło :
Applied and environmental microbiology [Appl Environ Microbiol] 2000 Oct; Vol. 66 (10), pp. 4503-9.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeny*
Symbiosis*
Burkholderia/*classification
Burkholderia/*physiology
Fungi/*physiology
Burkholderia/isolation & purification ; DNA, Ribosomal/genetics ; Fungi/classification ; Fungi/isolation & purification ; In Situ Hybridization ; Molecular Sequence Data ; Polymerase Chain Reaction ; RNA, Ribosomal, 16S/genetics ; Spores, Fungal
Czasopismo naukowe
Tytuł :
Ericoid mycorrhizal fungi are common root associates of a Mediterranean ectomycorrhizal plant (Quercus ilex).
Autorzy :
Bergero R; Dipartimento di Biologia Vegetale, University of Torino,Centro di Studio sulla Micologia del Terreno-CNR, Viale Mattioli 25, 10125-Torino, Italy. />Perotto S
Girlanda M
Vidano G
Luppi AM
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Źródło :
Molecular ecology [Mol Ecol] 2000 Oct; Vol. 9 (10), pp. 1639-49.
Typ publikacji :
Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Fungi/*physiology
Plant Roots/*microbiology
Trees/*microbiology
DNA, Ribosomal Spacer ; Fungi/genetics ; Fungi/isolation & purification ; Mediterranean Region ; Molecular Sequence Data ; Plant Diseases/microbiology ; Polymorphism, Genetic ; Polymorphism, Restriction Fragment Length
Czasopismo naukowe
Tytuł :
A diverse population of introns in the nuclear ribosomal genes of ericoid mycorrhizal fungi includes elements with sequence similarity to endonuclease-coding genes.
Autorzy :
Perotto S; Centro Studio Micologia del Terreno-CNR, Torino, Italy. perotto@bioveg.unito.it
Nepote-Fus P
Saletta L
Bandi C
Young JP
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Źródło :
Molecular biology and evolution [Mol Biol Evol] 2000 Jan; Vol. 17 (1), pp. 44-59.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Genes, Fungal*
Endonucleases/*genetics
Fungi/*genetics
Ribosomes/*genetics
Amino Acid Sequence ; Base Sequence ; Cell Nucleus/genetics ; Evolution, Molecular ; Molecular Sequence Data ; Phylogeny ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Bacterial associations with mycorrhizal fungi: close and distant friends in the rhizosphere.
Autorzy :
Perotto S; Dipartimento di Biologia Vegetale dell'Università di Torino, Italy. perotto@bioveg.unito.it
Bonfante P
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Źródło :
Trends in microbiology [Trends Microbiol] 1997 Dec; Vol. 5 (12), pp. 496-501.
Typ publikacji :
Journal Article; Review
MeSH Terms :
Bacteria*
Fungi*
Symbiosis*
Burkholderia/genetics ; Plant Roots
Czasopismo naukowe
Tytuł :
Inefficient photosynthesis in the Mediterranean orchid Limodorum abortivum is mirrored by specific association to ectomycorrhizal Russulaceae.
Autorzy :
Girlanda, M.
Selosse, M. A.
Cafasso, D.
Brilli, F.
Delfine, S.
Fabbian, R.
Ghignone, S.
Pinelli, P.
Segreto, R.
Loreto, F.
Cozzolino, S.
Perotto, S.
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Temat :
MYCOLOGY
CRYPTOGAMS
FUNGI
PARASITIC plants
PLANT ecology
PLANT communities
BIOTIC communities
BIOLOGICAL pigments
GASES from plants
Źródło :
Molecular Ecology; Feb2006, Vol. 15 Issue 2, p491-504, 14p, 4 Diagrams, 3 Charts
Czasopismo naukowe

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