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    Wyświetlanie 1-4 z 4
    Tytuł:
    A pan-genomic approach to genome databases using maize as a model system.
    Autorzy:
    Woodhouse MR; Corn Insects and Crop Genetics Research Unit, USDA-ARS, Ames, IA, 50011, USA. .
    Cannon EK; Corn Insects and Crop Genetics Research Unit, USDA-ARS, Ames, IA, 50011, USA.
    Portwood JL 2nd; Corn Insects and Crop Genetics Research Unit, USDA-ARS, Ames, IA, 50011, USA.
    Harper LC; Corn Insects and Crop Genetics Research Unit, USDA-ARS, Ames, IA, 50011, USA.
    Gardiner JM; Division of Animal Sciences, University of Missouri, 65211, Columbia, MO, USA.
    Schaeffer ML; Division of Plant Sciences, University of Missouri, 65211, Columbia, MO, USA.
    Andorf CM; Corn Insects and Crop Genetics Research Unit, USDA-ARS, Ames, IA, 50011, USA.; Department of Computer Science, Iowa State University, Ames, IA, 50011, USA.
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    Źródło:
    BMC plant biology [BMC Plant Biol] 2021 Aug 20; Vol. 21 (1), pp. 385. Date of Electronic Publication: 2021 Aug 20.
    Typ publikacji:
    Journal Article
    MeSH Terms:
    Data Accuracy*
    Databases as Topic*
    Genome, Plant*
    Genomics*
    Data Collection/*methods
    Zea mays/*genetics
    Genetic Variation
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
    Tytuł:
    De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes.
    Autorzy:
    Hufford MB; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA.
    Seetharam AS; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA.; Genome Informatics Facility, Iowa State University, Ames, IA 50011, USA.
    Woodhouse MR; USDA-ARS Corn Insects and Crop Genetics Research Unit, Iowa State University, Ames, IA 50011, USA.
    Chougule KM; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
    Ou S; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA.
    Liu J; Department of Genetics, University of Georgia, Athens, GA 30602, USA.
    Ricci WA; Department of Plant Biology, University of Georgia, Athens, GA 30602, USA.
    Guo T; Department of Agronomy, Iowa State University, Ames, IA 50011, USA.
    Olson A; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
    Qiu Y; Department of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN 55108, USA.
    Della Coletta R; Department of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN 55108, USA.
    Tittes S; Center for Population Biology, University of California, Davis, CA 95616, USA.; Department of Evolution and Ecology, University of California, Davis, CA 95616, USA.
    Hudson AI; Center for Population Biology, University of California, Davis, CA 95616, USA.; Department of Evolution and Ecology, University of California, Davis, CA 95616, USA.
    Marand AP; Department of Genetics, University of Georgia, Athens, GA 30602, USA.
    Wei S; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
    Lu Z; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
    Wang B; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
    Tello-Ruiz MK; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
    Piri RD; Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA.
    Wang N; Department of Plant Biology, University of Georgia, Athens, GA 30602, USA.
    Kim DW; Department of Plant Biology, University of Georgia, Athens, GA 30602, USA.
    Zeng Y; Department of Genetics, University of Georgia, Athens, GA 30602, USA.
    O'Connor CH; Department of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN 55108, USA.; Department of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN 55108, USA.
    Li X; Department of Agronomy, Iowa State University, Ames, IA 50011, USA.
    Gilbert AM; Department of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN 55108, USA.
    Baggs E; Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA.
    Krasileva KV; Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA.
    Portwood JL 2nd; USDA-ARS Corn Insects and Crop Genetics Research Unit, Iowa State University, Ames, IA 50011, USA.
    Cannon EKS; USDA-ARS Corn Insects and Crop Genetics Research Unit, Iowa State University, Ames, IA 50011, USA.
    Andorf CM; USDA-ARS Corn Insects and Crop Genetics Research Unit, Iowa State University, Ames, IA 50011, USA.
    Manchanda N; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA.
    Snodgrass SJ; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA.
    Hufnagel DE; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA.; Virus and Prion Research Unit, National Animal Disease Center, USDA-ARS, Ames, IA, 50010, USA.
    Jiang Q; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA.
    Pedersen S; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA.
    Syring ML; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA.
    Kudrna DA; Arizona Genomics Institute, School of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA.
    Llaca V; Corteva Agriscience, Johnston, IA 50131, USA.
    Fengler K; Corteva Agriscience, Johnston, IA 50131, USA.
    Schmitz RJ; Department of Genetics, University of Georgia, Athens, GA 30602, USA.
    Ross-Ibarra J; Center for Population Biology, University of California, Davis, CA 95616, USA.; Department of Evolution and Ecology, University of California, Davis, CA 95616, USA.; Genome Center, University of California, Davis, CA 95616, USA.
    Yu J; Department of Agronomy, Iowa State University, Ames, IA 50011, USA.
    Gent JI; Department of Plant Biology, University of Georgia, Athens, GA 30602, USA.
    Hirsch CN; Department of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN 55108, USA.
    Ware D; USDA-ARS NAA Robert W. Holley Center for Agriculture and Health, Agricultural Research Service, Ithaca, NY 14853, USA.; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
    Dawe RK; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA. .
    Pokaż więcej
    Źródło:
    Science (New York, N.Y.) [Science] 2021 Aug 06; Vol. 373 (6555), pp. 655-662.
    Typ publikacji:
    Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
    MeSH Terms:
    Genome, Plant*
    Molecular Sequence Annotation*
    Zea mays/*genetics
    Centromere/genetics ; Chromosome Mapping ; Chromosomes, Plant ; DNA Methylation ; Disease Resistance/genetics ; Genes, Plant ; Genetic Variation ; Genotype ; High-Throughput Nucleotide Sequencing ; Multifactorial Inheritance/genetics ; Phenotype ; Plant Diseases ; Polymorphism, Single Nucleotide ; Regulatory Sequences, Nucleic Acid ; Sequence Analysis, DNA ; Tetraploidy ; Transcriptome ; Whole Genome Sequencing
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
    Tytuł:
    GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations.
    Autorzy:
    Manchanda N; Department of Ecology, Evolution and Organismal Biology, Iowa State University, Ames, IA, 50011, USA.
    Portwood JL 2nd; USDA-ARS Corn Insects and Crop Genetics Research Unit, Ames, IA, 50011, USA.
    Woodhouse MR; USDA-ARS Corn Insects and Crop Genetics Research Unit, Ames, IA, 50011, USA.
    Seetharam AS; Genome Informatics Facility, Iowa State University, Ames, IA, 50011, USA.
    Lawrence-Dill CJ; Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA, 50011, USA.; Department of Agronomy, Iowa State University, Ames, IA, 50011, USA.
    Andorf CM; USDA-ARS Corn Insects and Crop Genetics Research Unit, Ames, IA, 50011, USA.
    Hufford MB; Department of Ecology, Evolution and Organismal Biology, Iowa State University, Ames, IA, 50011, USA. .
    Pokaż więcej
    Źródło:
    BMC genomics [BMC Genomics] 2020 Mar 02; Vol. 21 (1), pp. 193. Date of Electronic Publication: 2020 Mar 02.
    Typ publikacji:
    Journal Article
    MeSH Terms:
    Genomics/*methods
    Chromosome Mapping ; Computational Biology/methods ; High-Throughput Nucleotide Sequencing ; Humans ; Molecular Sequence Annotation ; Sequence Analysis, DNA ; Software
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
    Tytuł:
    SNPversity: a web-based tool for visualizing diversity.
    Autorzy:
    Schott DA; Department of Computer Science, Iowa State University, Ames, IA 50011, USA.
    Vinnakota AG; Department of Computer Science, Iowa State University, Ames, IA 50011, USA.
    Portwood JL 2nd; U.S. Department of Agriculture, Agricultural Research Service, Corn Insects and Crop Genetics Research Unit, Ames, IA 50011, USA.
    Andorf CM; Department of Computer Science, Iowa State University, Ames, IA 50011, USA.; U.S. Department of Agriculture, Agricultural Research Service, Corn Insects and Crop Genetics Research Unit, Ames, IA 50011, USA.
    Sen TZ; U.S. Department of Agriculture, Agricultural Research Service, Crop Improvement and Genetics Research Unit, 800 Buchanan St, Albany, CA 94710, USA.; Department of Genetics, Development, and Cell Biology, Iowa State University, Ames, IA 50011, USA.
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    Źródło:
    Database : the journal of biological databases and curation [Database (Oxford)] 2018 Jan 01; Vol. 2018.
    Typ publikacji:
    Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
    MeSH Terms:
    Alleles*
    Databases, Nucleic Acid*
    Internet*
    Polymorphism, Single Nucleotide*
    Web Browser*
    Avena/*genetics
    Triticum/*genetics
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
      Wyświetlanie 1-4 z 4

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