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Wyświetlanie 61-80 z 3918
Tytuł:
Protein functional module identification method combining topological features and gene expression data.
Autorzy:
Zhao Z; School of Computer and Information, Anhui Agricultural University, Hefei, Anhui, 230036, China.
Xu W; School of Computer and Information, Anhui Agricultural University, Hefei, Anhui, 230036, China.
Chen A; School of Computer and Information, Anhui Agricultural University, Hefei, Anhui, 230036, China.
Han Y; School of Computer and Information, Anhui Agricultural University, Hefei, Anhui, 230036, China.
Xia S; School of Computer and Information, Anhui Agricultural University, Hefei, Anhui, 230036, China.
Xiang C; School of Computer and Information, Anhui Agricultural University, Hefei, Anhui, 230036, China.
Wang C; School of Computer and Information, Anhui Agricultural University, Hefei, Anhui, 230036, China.
Jiao J; School of Computer and Information, Anhui Agricultural University, Hefei, Anhui, 230036, China.
Wang H; School of Computer and Information, Anhui Agricultural University, Hefei, Anhui, 230036, China.
Yuan X; Department of Computer Science and Engineering, University of North Texas, Denton, TX, 76203, United States.
Gu L; School of Computer and Information, Anhui Agricultural University, Hefei, Anhui, 230036, China. .
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Źródło:
BMC genomics [BMC Genomics] 2021 Jun 08; Vol. 22 (1), pp. 423. Date of Electronic Publication: 2021 Jun 08.
Typ publikacji:
Journal Article
MeSH Terms:
Protein Interaction Mapping*
Protein Interaction Maps*
Algorithms ; Cluster Analysis ; Gene Expression ; Proteins/genetics ; Proteins/metabolism
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Pepscan Approach for the Identification of Protein-Protein Interfaces: Lessons from Experiment.
Autorzy:
Rebollo A; UTCBS, Inserm 1265, Faculté de Pharmacie, Université de Paris, 75013 Paris, France.
Savier E; Department of Hepatobiliary and Liver Transplantation Surgery, Pitié-Salpêtrière Hospital, AP-HP, Sorbonne Université, 75013 Paris, France.
Tuffery P; BFA, CNRS, UMR 8251, Inserm U1133, Université de Paris, F-75013 Paris, France.
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Źródło:
Biomolecules [Biomolecules] 2021 May 21; Vol. 11 (6). Date of Electronic Publication: 2021 May 21.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Models, Molecular*
Protein Interaction Mapping*
Peptides/*chemistry
Proteins/*chemistry
Peptides/metabolism ; Proteins/metabolism
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Bioinformatics toolbox for exploring protein phosphorylation network.
Autorzy:
Shi XX; College of Chemistry, Central China Normal University (CCNU).
Wu FX; College of Chemistry, CCNU.
Mei LC; College of Chemistry, CCNU.
Wang YL; College of Chemistry, Central China Normal University (CCNU).
Hao GF; Bioinformatics in State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering of GZU and College of Chemistry of CCNU.
Yang GF; College of Chemistry of CCNU.
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Źródło:
Briefings in bioinformatics [Brief Bioinform] 2021 May 20; Vol. 22 (3).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't; Review
MeSH Terms:
Computational Biology*
Protein Interaction Mapping*
Protein Processing, Post-Translational*
Software*
Animals ; Humans ; Phosphorylation
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Identification of hot regions in hub protein-protein interactions by clustering and PPRA optimization.
Autorzy:
Lin X; Hubei Key Laboratory of Intelligent Information Processing and Real-Time Industrial System, School of Computer Science and Technology, Wuhan University of Science and Technology, Wuhan, 430065, People's Republic of China. .
Zhang X; Hubei Key Laboratory of Intelligent Information Processing and Real-Time Industrial System, School of Computer Science and Technology, Wuhan University of Science and Technology, Wuhan, 430065, People's Republic of China.
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Źródło:
BMC medical informatics and decision making [BMC Med Inform Decis Mak] 2021 May 03; Vol. 21 (Suppl 1), pp. 143. Date of Electronic Publication: 2021 May 03.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Protein Interaction Mapping*
Proteins*/chemistry
Cluster Analysis ; Computational Biology ; Reproducibility of Results
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Identification of novel inhibitors of Keap1/Nrf2 by a promising method combining protein-protein interaction-oriented library and machine learning.
Autorzy:
Shimizu Y; Division of Physics for Life Functions, Faculty of Pharmacy, Keio University, 1-5-30 Shibakoen, Minato-ku, Tokyo, 105-8512, Japan.
Yonezawa T; Division of Physics for Life Functions, Faculty of Pharmacy, Keio University, 1-5-30 Shibakoen, Minato-ku, Tokyo, 105-8512, Japan.; Lifematics Inc., Sanshin-Hatchobori Bldg. 5F, 2-25-10 Chuo-ku, Hatchobori, Tokyo, 104-0032, Japan.
Sakamoto J; Axcelead Drug Discovery Partners, Inc., 26-1, Muraoka-Higashi 2-chome, Fujisawa, Kanagawa, 251-0012, Japan.
Furuya T; Drug Discovery Department, Research and Development Division, PharmaDesign, Inc., Hatchobori 2-19-8, Chuo-ku, Tokyo, 104-0032, Japan.
Osawa M; Division of Physics for Life Functions, Faculty of Pharmacy, Keio University, 1-5-30 Shibakoen, Minato-ku, Tokyo, 105-8512, Japan.
Ikeda K; Division of Physics for Life Functions, Faculty of Pharmacy, Keio University, 1-5-30 Shibakoen, Minato-ku, Tokyo, 105-8512, Japan. .
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Źródło:
Scientific reports [Sci Rep] 2021 Apr 01; Vol. 11 (1), pp. 7420. Date of Electronic Publication: 2021 Apr 01.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Machine Learning*
Protein Interaction Mapping*/methods
Drug Discovery/*methods
Kelch-Like ECH-Associated Protein 1/*chemistry
NF-E2-Related Factor 2/*chemistry
Binding Sites ; Humans ; Kelch-Like ECH-Associated Protein 1/antagonists & inhibitors ; Ligands ; Molecular Conformation ; Molecular Docking Simulation ; Molecular Dynamics Simulation ; Molecular Structure ; NF-E2-Related Factor 2/antagonists & inhibitors ; Protein Binding ; Protein Interaction Maps ; Small Molecule Libraries ; Structure-Activity Relationship
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
TagBiFC technique allows long-term single-molecule tracking of protein-protein interactions in living cells.
Autorzy:
Shao S; State Key Laboratory of Membrane Biology, Biomedical Pioneering Innovation Center (BIOPIC), School of Life Sciences, Peking University, Beijing, China.; Beijing Institute of Heart Lung and Blood Vessel Disease, Beijing Anzhen Hospital, Capital Medical University, Beijing, China.
Zhang H; State Key Laboratory of Membrane Biology, Biomedical Pioneering Innovation Center (BIOPIC), School of Life Sciences, Peking University, Beijing, China.
Zeng Y; Beijing Institute of Heart Lung and Blood Vessel Disease, Beijing Anzhen Hospital, Capital Medical University, Beijing, China.
Li Y; State Key Laboratory of Membrane Biology, Biomedical Pioneering Innovation Center (BIOPIC), School of Life Sciences, Peking University, Beijing, China.; The Second Dental Center, Peking University School and Hospital of Stomatology, Beijing, China.
Sun C; State Key Laboratory of Membrane Biology, Biomedical Pioneering Innovation Center (BIOPIC), School of Life Sciences, Peking University, Beijing, China.
Sun Y; State Key Laboratory of Membrane Biology, Biomedical Pioneering Innovation Center (BIOPIC), School of Life Sciences, Peking University, Beijing, China. sun_.
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Źródło:
Communications biology [Commun Biol] 2021 Mar 19; Vol. 4 (1), pp. 378. Date of Electronic Publication: 2021 Mar 19.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Microscopy, Fluorescence*
Protein Interaction Mapping*
Single Molecule Imaging*
Chromatin/*metabolism
DNA/*metabolism
Transcription Factors/*metabolism
Binding Sites ; Cell Line, Tumor ; Fluorescent Dyes/chemistry ; Humans ; Protein Binding ; Time Factors
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Pull-Down Assay-Guided Insights into the Effects of Latroeggtoxin-VI on Nerve Cells.
Autorzy:
Tang X; State Key Laboratory of Developmental Biology of Freshwater Fish, Protein Chemistry Laboratory, College of Life Sciences, Hunan Normal University, Changsha 410081, China.
Yu D; State Key Laboratory of Developmental Biology of Freshwater Fish, Protein Chemistry Laboratory, College of Life Sciences, Hunan Normal University, Changsha 410081, China.
Wang H; State Key Laboratory of Developmental Biology of Freshwater Fish, Protein Chemistry Laboratory, College of Life Sciences, Hunan Normal University, Changsha 410081, China.
Meng W; State Key Laboratory of Developmental Biology of Freshwater Fish, Protein Chemistry Laboratory, College of Life Sciences, Hunan Normal University, Changsha 410081, China.
Zhai Y; State Key Laboratory of Developmental Biology of Freshwater Fish, Protein Chemistry Laboratory, College of Life Sciences, Hunan Normal University, Changsha 410081, China.
Lei Z; State Key Laboratory of Developmental Biology of Freshwater Fish, Protein Chemistry Laboratory, College of Life Sciences, Hunan Normal University, Changsha 410081, China.
Liu Z; State Key Laboratory of Developmental Biology of Freshwater Fish, Protein Chemistry Laboratory, College of Life Sciences, Hunan Normal University, Changsha 410081, China.
Wang X; State Key Laboratory of Developmental Biology of Freshwater Fish, Protein Chemistry Laboratory, College of Life Sciences, Hunan Normal University, Changsha 410081, China.
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Źródło:
Toxins [Toxins (Basel)] 2021 Feb 12; Vol. 13 (2). Date of Electronic Publication: 2021 Feb 12.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Protein Interaction Mapping*
Proteome*
Proteomics*
Arthropod Proteins/*toxicity
Dopaminergic Neurons/*drug effects
Animals ; Apoptosis/drug effects ; Apoptosis Regulatory Proteins/metabolism ; Arthropod Proteins/genetics ; Arthropod Proteins/metabolism ; Cell Cycle/drug effects ; Cell Cycle Proteins/metabolism ; Dopamine/metabolism ; Dopaminergic Neurons/metabolism ; Dopaminergic Neurons/pathology ; PC12 Cells ; Protein Binding ; Rats ; Signal Transduction
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Analysis of affinity purification-related proteomic data for studying protein-protein interaction networks in cells.
Autorzy:
Kattan RE; Department of Developmental and Cell Biology, University of California, Irvine, Irvine, CA 92697, USA.
Ayesh D; Department of Developmental and Cell Biology, University of California, Irvine, Irvine, CA 92697, USA.
Wang W; Department of Developmental and Cell Biology, University of California, Irvine, Irvine, CA 92697, USA.
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Źródło:
Briefings in bioinformatics [Brief Bioinform] 2023 Mar 19; Vol. 24 (2).
Typ publikacji:
Review; Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural
MeSH Terms:
Protein Interaction Maps*
Proteomics*/methods
Proteins/metabolism ; Signal Transduction ; Mass Spectrometry/methods ; Protein Interaction Mapping/methods
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Data-driven biological network alignment that uses topological, sequence, and functional information.
Autorzy:
Gu S; Department of Computer Science and Engineering, Eck Institute for Global Health, Center for Network and Data Science, University of Notre Dame, Notre Dame, IN, 46556, USA.
Milenković T; Department of Computer Science and Engineering, Eck Institute for Global Health, Center for Network and Data Science, University of Notre Dame, Notre Dame, IN, 46556, USA. .
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Źródło:
BMC bioinformatics [BMC Bioinformatics] 2021 Jan 29; Vol. 22 (1), pp. 34. Date of Electronic Publication: 2021 Jan 29.
Typ publikacji:
Journal Article
MeSH Terms:
Algorithms*
Protein Interaction Mapping*
Proteins*/genetics
Animals ; Computational Biology ; Mice ; Molecular Sequence Annotation ; Saccharomyces cerevisiae ; Sequence Alignment
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Classification and prediction of protein-protein interaction interface using machine learning algorithm.
Autorzy:
Das S; Structural Biology and Bioinformatics Division, CSIR-Indian Institute of Chemical Biology, Kolkata, WB, India.
Chakrabarti S; Structural Biology and Bioinformatics Division, CSIR-Indian Institute of Chemical Biology, Kolkata, WB, India. .
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Źródło:
Scientific reports [Sci Rep] 2021 Jan 19; Vol. 11 (1), pp. 1761. Date of Electronic Publication: 2021 Jan 19.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Molecular Docking Simulation*
Protein Interaction Mapping*
Protein Interaction Maps*
Support Vector Machine*
Proteins/*metabolism
Binding Sites ; Databases, Protein ; Models, Molecular ; Protein Binding ; Thermodynamics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Elucidating the network features and evolutionary attributes of intra- and interspecific protein-protein interactions between human and pathogenic bacteria.
Autorzy:
Acharya D; Department of Microbiology, Bose Institute, P-1/12, CIT Scheme VII M, Kolkata, West Bengal, 700 054, India.
Dutta TK; Department of Microbiology, Bose Institute, P-1/12, CIT Scheme VII M, Kolkata, West Bengal, 700 054, India. .
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Źródło:
Scientific reports [Sci Rep] 2021 Jan 08; Vol. 11 (1), pp. 190. Date of Electronic Publication: 2021 Jan 08.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Computational Biology*
Evolution, Molecular*
Protein Interaction Mapping*
Host-Pathogen Interactions/*genetics
Humans
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
ClusterM: a scalable algorithm for computational prediction of conserved protein complexes across multiple protein interaction networks.
Autorzy:
Wang Y; School of Informatics, Computing and Engineering, Indiana University, Bloomington, 47405, IN, USA.
Jeong H; Department of Mechatronics Engineering, Incheon National University, Incheon, 22012, South Korea.
Yoon BJ; Department of Electrical and Computer Engineering, Texas A&M University, College Station, 77843, TX, USA.; TEES-AgriLife Center for Bioinformatics and Genomic Systems Engineering (CBGSE), Texas A&M University, College Station, 77843, TX, USA.; Computational Science Initiative, Brookhaven National Lab, Upton, 11973, NY, USA.
Qian X; Department of Electrical and Computer Engineering, Texas A&M University, College Station, 77843, TX, USA. .; TEES-AgriLife Center for Bioinformatics and Genomic Systems Engineering (CBGSE), Texas A&M University, College Station, 77843, TX, USA. .
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Źródło:
BMC genomics [BMC Genomics] 2020 Nov 18; Vol. 21 (Suppl 10), pp. 615. Date of Electronic Publication: 2020 Nov 18.
Typ publikacji:
Journal Article
MeSH Terms:
Computational Biology*
Protein Interaction Mapping*
Protein Interaction Maps*
Algorithms ; Animals ; Caenorhabditis elegans/genetics ; Drosophila melanogaster/genetics ; Humans ; Polycomb Repressive Complex 1 ; Saccharomyces cerevisiae/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
AligNet: alignment of protein-protein interaction networks.
Autorzy:
Alcalá A; Department of Mathematics and Computer Science, University of the Balearic Islands, Palma de Mallorca, E-07122, Spain.; Balearic Islands Health Research Institute (IdISBa), Palma de Mallorca, E-07010, Spain.
Alberich R; Department of Mathematics and Computer Science, University of the Balearic Islands, Palma de Mallorca, E-07122, Spain.; Balearic Islands Health Research Institute (IdISBa), Palma de Mallorca, E-07010, Spain.
Llabrés M; Department of Mathematics and Computer Science, University of the Balearic Islands, Palma de Mallorca, E-07122, Spain. .; Balearic Islands Health Research Institute (IdISBa), Palma de Mallorca, E-07010, Spain. .
Rosselló F; Department of Mathematics and Computer Science, University of the Balearic Islands, Palma de Mallorca, E-07122, Spain.; Balearic Islands Health Research Institute (IdISBa), Palma de Mallorca, E-07010, Spain.
Valiente G; Algorithms, Bioinformatics, Complexity and Formal Methods Research Group, Technical University of Catalonia, Barcelona, E-08034, Spain.
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Źródło:
BMC bioinformatics [BMC Bioinformatics] 2020 Nov 18; Vol. 21 (Suppl 6), pp. 265. Date of Electronic Publication: 2020 Nov 18.
Typ publikacji:
Journal Article
MeSH Terms:
Protein Interaction Mapping*
Protein Interaction Maps*
Proteins*/metabolism
Algorithms ; Biological Evolution
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Triage of documents containing protein interactions affected by mutations using an NLP based machine learning approach.
Autorzy:
Qu J; Department of Statistics, Florida State University, Tallahassee, FL, 32306, USA.
Steppi A; Laboratory of Systems Pharmacology at Harvard Medical School, Boston, MA, 02115, USA.
Zhong D; Department of Statistics, Florida State University, Tallahassee, FL, 32306, USA.
Hao J; Department of Statistics, Florida State University, Tallahassee, FL, 32306, USA.
Wang J; CloudMedx, Palo Alto, CA, 94301, USA.
Lung PY; Verisk - Insurance Solutions, Middletown, CT, 06457, USA.
Zhao T; Department of Geography, Florida State University, Tallahassee, FL, 32306, USA.
He Z; College of Communication and Information, Florida State University, Tallahassee, FL, 32306, USA.
Zhang J; Department of Statistics, Florida State University, Tallahassee, FL, 32306, USA. .
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Źródło:
BMC genomics [BMC Genomics] 2020 Nov 10; Vol. 21 (1), pp. 773. Date of Electronic Publication: 2020 Nov 10.
Typ publikacji:
Journal Article
MeSH Terms:
Data Mining*
Natural Language Processing*
Protein Interaction Mapping*
Machine Learning ; Mutation
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Mapping the native interaction surfaces of PREP1 with PBX1 by cross-linking mass-spectrometry and mutagenesis.
Autorzy:
Bruckmann C; IFOM (Foundation FIRC Institute of Molecular Oncology), Via Adamello 16, 20139, Milan, Italy. .
Tamburri S; IFOM (Foundation FIRC Institute of Molecular Oncology), Via Adamello 16, 20139, Milan, Italy.; Department of Experimental Oncology, European Institute of Oncology, Via Adamello 16, 20139, Milan, Italy.
De Lorenzi V; IFOM (Foundation FIRC Institute of Molecular Oncology), Via Adamello 16, 20139, Milan, Italy.; Center for Nanotechnology , Istituto Italiano di Tecnologia, Piazza San Silvestro 12, 56124, Pisa, Italy.
Doti N; Institute of Biostructures and Bioimaging (IBB)-CNR, Via Mezzocannone 16, 80134, Naples, Italy.
Monti A; Institute of Biostructures and Bioimaging (IBB)-CNR, Via Mezzocannone 16, 80134, Naples, Italy.
Mathiasen L; IFOM (Foundation FIRC Institute of Molecular Oncology), Via Adamello 16, 20139, Milan, Italy.
Cattaneo A; IFOM (Foundation FIRC Institute of Molecular Oncology), Via Adamello 16, 20139, Milan, Italy.; Cogentech S.R.L. Benefit Corporation IT, Via Adamello 16, 20139, Milan, Italy.
Ruvo M; Institute of Biostructures and Bioimaging (IBB)-CNR, Via Mezzocannone 16, 80134, Naples, Italy.
Bachi A; IFOM (Foundation FIRC Institute of Molecular Oncology), Via Adamello 16, 20139, Milan, Italy.
Blasi F; IFOM (Foundation FIRC Institute of Molecular Oncology), Via Adamello 16, 20139, Milan, Italy. .
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Źródło:
Scientific reports [Sci Rep] 2020 Oct 08; Vol. 10 (1), pp. 16809. Date of Electronic Publication: 2020 Oct 08.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Protein Interaction Mapping*/methods
Homeodomain Proteins/*metabolism
Pre-B-Cell Leukemia Transcription Factor 1/*metabolism
A549 Cells ; Binding Sites ; Cloning, Molecular ; Enzyme-Linked Immunosorbent Assay ; Humans ; Mass Spectrometry ; Mutagenesis ; Myeloid Ecotropic Viral Integration Site 1 Protein/metabolism
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Keeping in Touch with Type-III Secretion System Effectors: Mass Spectrometry-Based Proteomics to Study Effector-Host Protein-Protein Interactions.
Autorzy:
Meyer M; Department of Biochemistry and Microbiology, Ghent University, K. L. Ledeganckstraat 35, 9000 Ghent, Belgium.; VIB Center for Medical Biotechnology, Technologiepark 75, 9052 Zwijnaarde, Belgium.
Ryck J; Department of Biochemistry and Microbiology, Ghent University, K. L. Ledeganckstraat 35, 9000 Ghent, Belgium.; VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Zwijnaarde, Belgium.; Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, 9052 Zwijnaarde, Belgium.
Goormachtig S; VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Zwijnaarde, Belgium.; Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, 9052 Zwijnaarde, Belgium.
Van Damme P; Department of Biochemistry and Microbiology, Ghent University, K. L. Ledeganckstraat 35, 9000 Ghent, Belgium.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2020 Sep 19; Vol. 21 (18). Date of Electronic Publication: 2020 Sep 19.
Typ publikacji:
Journal Article; Review
MeSH Terms:
Bacterial Physiological Phenomena*
Protein Interaction Mapping*
Proteomics*
Bacteria/*metabolism
Bacterial Infections/*metabolism
Host-Pathogen Interactions/*physiology
Type III Secretion Systems/*metabolism
Humans ; Mass Spectrometry
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
On the Detection and Functional Significance of the Protein-Protein Interactions of Mitochondrial Transport Proteins.
Autorzy:
Zhang Y; Center of Plant Systems Biology and Biotechnology, 4000 Plovdiv, Bulgaria.; Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, 14476 Potsdam-Golm, Germany.
Fernie AR; Center of Plant Systems Biology and Biotechnology, 4000 Plovdiv, Bulgaria.; Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, 14476 Potsdam-Golm, Germany.
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Źródło:
Biomolecules [Biomolecules] 2020 Jul 25; Vol. 10 (8). Date of Electronic Publication: 2020 Jul 25.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't; Review
MeSH Terms:
Protein Interaction Mapping*/methods
Protein Interaction Maps*
Carrier Proteins/*metabolism
Mitochondrial Proteins/*metabolism
Animals ; Humans ; Mitochondria/metabolism
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Topological and system-level protein interaction network (PIN) analyses to deduce molecular mechanism of curcumin.
Autorzy:
Dhasmana A; Department of Immunology and Microbiology, School of Medicine, University of Texas Rio Grande Valley, Edinburg, TX, USA.; Department of Biosciences and Cancer Research Institute, Himalayan Institute of Medical Sciences, Swami Rama Himalayan University, Dehradun, India.
Uniyal S; School of Biotechnology, Gautam Buddha University, Greater Noida, India.
Anukriti; Department of Biosciences and Cancer Research Institute, Himalayan Institute of Medical Sciences, Swami Rama Himalayan University, Dehradun, India.
Kashyap VK; Department of Immunology and Microbiology, School of Medicine, University of Texas Rio Grande Valley, Edinburg, TX, USA.
Somvanshi P; Department of Biotechnology, TERI School of Advanced Studies, 10, Institutional Area, Vasant Kunj,, New Delhi, India.
Gupta M; Department of Biosciences and Cancer Research Institute, Himalayan Institute of Medical Sciences, Swami Rama Himalayan University, Dehradun, India.
Bhardwaj U; Department of Biosciences and Cancer Research Institute, Himalayan Institute of Medical Sciences, Swami Rama Himalayan University, Dehradun, India.
Jaggi M; Department of Immunology and Microbiology, School of Medicine, University of Texas Rio Grande Valley, Edinburg, TX, USA.
Yallapu MM; Department of Immunology and Microbiology, School of Medicine, University of Texas Rio Grande Valley, Edinburg, TX, USA.
Haque S; Research and Scientific Studies Unit, College of Nursing and Allied Health Sciences, Jazan University, Jazan, Saudi Arabia.
Chauhan SC; Department of Immunology and Microbiology, School of Medicine, University of Texas Rio Grande Valley, Edinburg, TX, USA. .
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Źródło:
Scientific reports [Sci Rep] 2020 Jul 21; Vol. 10 (1), pp. 12045. Date of Electronic Publication: 2020 Jul 21.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Protein Interaction Mapping*/methods
Protein Interaction Maps*
Curcumin/*chemistry
Curcumin/*pharmacology
Computational Biology/methods ; Dose-Response Relationship, Drug ; Kinetics ; Molecular Docking Simulation ; Molecular Dynamics Simulation ; Molecular Sequence Annotation ; Protein Binding/drug effects ; Signal Transduction/drug effects
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Asymmetry between Activators and Deactivators in Functional Protein Networks.
Autorzy:
Tareen A; Department of Physics, Clark University, Worcester, Massachusetts, 01610, USA.; Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA.
Wingreen NS; Lewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Washington Road, Princeton, New Jersey, 08544, USA. .; Department of Molecular Biology, Princeton University, Princeton, NJ, 08544, USA. .
Mukhopadhyay R; Department of Physics, Clark University, Worcester, Massachusetts, 01610, USA. .
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Źródło:
Scientific reports [Sci Rep] 2020 Jun 23; Vol. 10 (1), pp. 10131. Date of Electronic Publication: 2020 Jun 23.
Typ publikacji:
Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
Protein Interaction Mapping*
Protein Interaction Maps*
Proteins/*genetics
Proteins/*metabolism
Algorithms ; Animals ; Evolution, Molecular ; Humans ; Mutation ; Phosphorylation ; Protein Processing, Post-Translational
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Identifying essential proteins in dynamic protein networks based on an improved h-index algorithm.
Autorzy:
Dai C; College of Artificial Intelligence and Information Technology, Nanjing University of Chinese Medicine University, Nanjing, 210000, China. .
He J; College of Artificial Intelligence and Information Technology, Nanjing University of Chinese Medicine University, Nanjing, 210000, China.
Hu K; College of Artificial Intelligence and Information Technology, Nanjing University of Chinese Medicine University, Nanjing, 210000, China.
Ding Y; College of Artificial Intelligence and Information Technology, Nanjing University of Chinese Medicine University, Nanjing, 210000, China.
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Źródło:
BMC medical informatics and decision making [BMC Med Inform Decis Mak] 2020 Jun 17; Vol. 20 (1), pp. 110. Date of Electronic Publication: 2020 Jun 17.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Algorithms*
Protein Interaction Mapping*
Protein Interaction Maps*
Computational Biology ; Humans ; Proteins/chemistry
Czasopismo naukowe
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