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Wyszukujesz frazę ""Protein Stability"" wg kryterium: Temat


Tytuł:
Facile Method for High-throughput Identification of Stabilizing Mutations.
Autorzy:
Christensen S; Department of Biochemistry and Structural Biology, Lund University, Lund, Sweden.
Wernersson C; Department of Biochemistry and Structural Biology, Lund University, Lund, Sweden.
André I; Department of Biochemistry and Structural Biology, Lund University, Lund, Sweden. Electronic address: .
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Źródło:
Journal of molecular biology [J Mol Biol] 2023 Sep 15; Vol. 435 (18), pp. 168209. Date of Electronic Publication: 2023 Jul 20.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Amino Acid Sequence*/genetics
Mutation, Missense*
Protein Folding*
Protein Stability*
Sequence Analysis, Protein*/methods
Adenylate Kinase/chemistry ; Adenylate Kinase/genetics ; High-Throughput Screening Assays/methods ; Temperature
Czasopismo naukowe
Tytuł:
DDMut: predicting effects of mutations on protein stability using deep learning.
Autorzy:
Zhou Y; School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Australia.; Computational Biology and Clinical Informatics, Baker Heart and Diabetes Institute, Melbourne, Victoria, Australia.
Pan Q; School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Australia.; Computational Biology and Clinical Informatics, Baker Heart and Diabetes Institute, Melbourne, Victoria, Australia.
Pires DEV; School of Computing and Information Systems, University of Melbourne, Melbourne, Victoria, Australia.
Rodrigues CHM; School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Australia.; Computational Biology and Clinical Informatics, Baker Heart and Diabetes Institute, Melbourne, Victoria, Australia.
Ascher DB; School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Australia.; Computational Biology and Clinical Informatics, Baker Heart and Diabetes Institute, Melbourne, Victoria, Australia.
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Źródło:
Nucleic acids research [Nucleic Acids Res] 2023 Jul 05; Vol. 51 (W1), pp. W122-W128.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Deep Learning*
Protein Stability*
Software*
Proteins*/chemistry
Proteins*/genetics
Mutation ; Point Mutation
Czasopismo naukowe
Tytuł:
Controlling protein stability with SULI, a highly sensitive tag for stabilization upon light induction.
Autorzy:
Mao M; Optogenetics & Synthetic Biology Interdisciplinary Research Center, State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing Technology, East China University of Science and Technology, 130 Mei Long Road, Shanghai, 200237, China.; Shanghai Frontiers Science Center of Optogenetic Techniques for Cell Metabolism, School of Pharmacy, East China University of Science and Technology, 130 Mei Long Road, Shanghai, 200237, China.; Bio-Med Big Data Center, CAS Key Laboratory of Computational Biology, CAS Center for Excellence in Molecular Cell Science, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai, 200031, China.
Qian Y; Optogenetics & Synthetic Biology Interdisciplinary Research Center, State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing Technology, East China University of Science and Technology, 130 Mei Long Road, Shanghai, 200237, China.; Shanghai Frontiers Science Center of Optogenetic Techniques for Cell Metabolism, School of Pharmacy, East China University of Science and Technology, 130 Mei Long Road, Shanghai, 200237, China.
Zhang W; Optogenetics & Synthetic Biology Interdisciplinary Research Center, State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing Technology, East China University of Science and Technology, 130 Mei Long Road, Shanghai, 200237, China.
Zhou S; Optogenetics & Synthetic Biology Interdisciplinary Research Center, State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing Technology, East China University of Science and Technology, 130 Mei Long Road, Shanghai, 200237, China.; Shanghai Frontiers Science Center of Optogenetic Techniques for Cell Metabolism, School of Pharmacy, East China University of Science and Technology, 130 Mei Long Road, Shanghai, 200237, China.
Wang Z; Bio-Med Big Data Center, CAS Key Laboratory of Computational Biology, CAS Center for Excellence in Molecular Cell Science, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai, 200031, China.
Chen X; Optogenetics & Synthetic Biology Interdisciplinary Research Center, State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing Technology, East China University of Science and Technology, 130 Mei Long Road, Shanghai, 200237, China. .; Shanghai Frontiers Science Center of Optogenetic Techniques for Cell Metabolism, School of Pharmacy, East China University of Science and Technology, 130 Mei Long Road, Shanghai, 200237, China. .
Yang Y; Optogenetics & Synthetic Biology Interdisciplinary Research Center, State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing Technology, East China University of Science and Technology, 130 Mei Long Road, Shanghai, 200237, China. .; Shanghai Frontiers Science Center of Optogenetic Techniques for Cell Metabolism, School of Pharmacy, East China University of Science and Technology, 130 Mei Long Road, Shanghai, 200237, China. .
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Źródło:
Nature communications [Nat Commun] 2023 Apr 15; Vol. 14 (1), pp. 2172. Date of Electronic Publication: 2023 Apr 15.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Optogenetics*/methods
Protein Engineering*/methods
Protein Stability*
Fungal Proteins/chemistry ; Protein Domains ; Saccharomyces cerevisiae ; Zebrafish ; Animals
Czasopismo naukowe
Tytuł:
Most Monogenic Disorders Are Caused by Mutations Altering Protein Folding Free Energy.
Autorzy:
Pandey P; Department of Physics and Astronomy, Clemson University, Clemson, SC 29634, USA.
Alexov E; Department of Physics and Astronomy, Clemson University, Clemson, SC 29634, USA.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Feb 06; Vol. 25 (4). Date of Electronic Publication: 2024 Feb 06.
Typ publikacji:
Journal Article
MeSH Terms:
Proteins*/chemistry
Protein Folding*
Thermodynamics ; Mutation ; Protein Stability ; Amino Acids/genetics
Czasopismo naukowe
Tytuł:
Fluorescence-Based Protein Stability Monitoring-A Review.
Autorzy:
Gooran N; Department of Chemistry, University of Turku, Henrikinkatu 2, 20500 Turku, Finland.
Kopra K; Department of Chemistry, University of Turku, Henrikinkatu 2, 20500 Turku, Finland.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Feb 01; Vol. 25 (3). Date of Electronic Publication: 2024 Feb 01.
Typ publikacji:
Journal Article; Review
MeSH Terms:
Proteins*/chemistry
Amino Acids*
Protein Stability ; Fluorometry/methods ; Biological Assay ; Protein Denaturation
Czasopismo naukowe
Tytuł:
Regulation of EZH2 protein stability: new mechanisms, roles in tumorigenesis, and roads to the clinic.
Autorzy:
Guo Y; Cancer Center of Peking University Third Hospital, Beijing, China; Center of Basic Medical Research, Institute of Medical Innovation and Research, Peking University Third Hospital, Beijing, China.
Cheng R; Cancer Center of Peking University Third Hospital, Beijing, China; Center of Basic Medical Research, Institute of Medical Innovation and Research, Peking University Third Hospital, Beijing, China.
Wang Y; Center of Basic Medical Research, Institute of Medical Innovation and Research, Peking University Third Hospital, Beijing, China.
Gonzalez ME; Department of Pathology, University of Michigan Medical School, Ann Arbor, MI, 48109, USA.
Zhang H; Department of Pathology, University of Michigan Medical School, Ann Arbor, MI, 48109, USA.
Liu Y; Cancer Center of Peking University Third Hospital, Beijing, China; Center of Basic Medical Research, Institute of Medical Innovation and Research, Peking University Third Hospital, Beijing, China. Electronic address: yliu_.
Kleer CG; Department of Pathology, University of Michigan Medical School, Ann Arbor, MI, 48109, USA. Electronic address: .
Xue L; Cancer Center of Peking University Third Hospital, Beijing, China; Center of Basic Medical Research, Institute of Medical Innovation and Research, Peking University Third Hospital, Beijing, China. Electronic address: .
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Źródło:
EBioMedicine [EBioMedicine] 2024 Feb; Vol. 100, pp. 104972. Date of Electronic Publication: 2024 Jan 19.
Typ publikacji:
Journal Article; Review
MeSH Terms:
Enhancer of Zeste Homolog 2 Protein*/metabolism
Neoplasms*/genetics
Neoplasms*/metabolism
Humans ; Carcinogenesis/genetics ; Cell Transformation, Neoplastic ; Enzyme Inhibitors ; Protein Stability
Czasopismo naukowe
Tytuł:
ReBaTSA: A simplified CeTSA protocol for studying recombinant mutant proteins in bacterial extracts.
Autorzy:
Monticelli M; Institute of Biomolecular Chemistry ICB, CNR, Via Campi Flegrei 34, 80078 Pozzuoli, Italy; Department of Biology, University of Napoli 'Federico II', Complesso Universitario Monte Sant'Angelo, Via Cinthia, 80126 Napoli, Italy.
Wright DM; Institute of Biomolecular Chemistry ICB, CNR, Via Campi Flegrei 34, 80078 Pozzuoli, Italy; Institute of Chemistry and Biochemistry, Freie Universität Berlin, D-14195 Berlin, Germany.
Cubellis MV; Institute of Biomolecular Chemistry ICB, CNR, Via Campi Flegrei 34, 80078 Pozzuoli, Italy; Department of Biology, University of Napoli 'Federico II', Complesso Universitario Monte Sant'Angelo, Via Cinthia, 80126 Napoli, Italy; Stazione Zoologica 'Anton Dohrn', Villa Comunale, Naples, Italy. Electronic address: .
Andreotti G; Institute of Biomolecular Chemistry ICB, CNR, Via Campi Flegrei 34, 80078 Pozzuoli, Italy. Electronic address: .
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Źródło:
Biochimica et biophysica acta. General subjects [Biochim Biophys Acta Gen Subj] 2024 Feb; Vol. 1868 (2), pp. 130526. Date of Electronic Publication: 2023 Dec 03.
Typ publikacji:
Journal Article
MeSH Terms:
Bacterial Lysates*
Mutant Proteins ; Reproducibility of Results ; Protein Stability ; Recombinant Proteins/genetics
Czasopismo naukowe
Tytuł:
Nonsynonymous Mutations in Intellectual Disability and Autism Spectrum Disorder Gene PTCHD1 Disrupt N -Glycosylation and Reduce Protein Stability.
Autorzy:
Xie CTY; Department of Laboratory Medicine & Pathobiology, University of Toronto, Toronto, ON M5S 1A8, Canada.
Pastore SF; Molecular Neuropsychiatry & Development (MiND) Lab, Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, ON M5T 1RS, Canada.; Institute of Medical Science, University of Toronto, Toronto, ON M5S 1A8, Canada.; Department of Psychiatry, University of Toronto, Toronto, ON M5T 1R8, Canada.
Vincent JB; Molecular Neuropsychiatry & Development (MiND) Lab, Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, ON M5T 1RS, Canada.; Institute of Medical Science, University of Toronto, Toronto, ON M5S 1A8, Canada.; Department of Psychiatry, University of Toronto, Toronto, ON M5T 1R8, Canada.
Frankland PW; Institute of Medical Science, University of Toronto, Toronto, ON M5S 1A8, Canada.; Program in Neurosciences and Mental Health, The Hospital for Sick Children, Toronto, ON M5G 1X8, Canada.; Department of Psychology, University of Toronto, Toronto, ON M5S 3G3, Canada.; Department of Physiology, University of Toronto, Toronto, ON M5S 1A8, Canada.
Hamel PA; Department of Laboratory Medicine & Pathobiology, University of Toronto, Toronto, ON M5S 1A8, Canada.
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Źródło:
Cells [Cells] 2024 Jan 21; Vol. 13 (2). Date of Electronic Publication: 2024 Jan 21.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Intellectual Disability*/genetics
Autism Spectrum Disorder*/genetics
Humans ; Glycosylation ; Membrane Proteins/genetics ; Membrane Proteins/metabolism ; Mutation/genetics ; Protein Stability
Czasopismo naukowe
Tytuł:
Assessing computational tools for predicting protein stability changes upon missense mutations using a new dataset.
Autorzy:
Zheng F; MOE Key Laboratory of Geriatric Diseases and Immunology, School of Biology and Basic Medical Sciences, Suzhou Medical College of Soochow University, Suzhou, China.
Liu Y; MOE Key Laboratory of Geriatric Diseases and Immunology, School of Biology and Basic Medical Sciences, Suzhou Medical College of Soochow University, Suzhou, China.
Yang Y; MOE Key Laboratory of Geriatric Diseases and Immunology, School of Biology and Basic Medical Sciences, Suzhou Medical College of Soochow University, Suzhou, China.
Wen Y; MOE Key Laboratory of Geriatric Diseases and Immunology, School of Biology and Basic Medical Sciences, Suzhou Medical College of Soochow University, Suzhou, China.
Li M; MOE Key Laboratory of Geriatric Diseases and Immunology, School of Biology and Basic Medical Sciences, Suzhou Medical College of Soochow University, Suzhou, China.
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Źródło:
Protein science : a publication of the Protein Society [Protein Sci] 2024 Jan; Vol. 33 (1), pp. e4861.
Typ publikacji:
Journal Article
MeSH Terms:
Mutation, Missense*
Proteins*/genetics
Proteins*/chemistry
Computational Biology/methods ; Mutation ; Point Mutation ; Protein Stability ; Datasets as Topic
Czasopismo naukowe
Tytuł:
Missense mutations in the central domains of cardiac myosin binding protein-C and their potential contribution to hypertrophic cardiomyopathy.
Autorzy:
Pearce A; School of Cardiovascular and Metabolic Medicine and Sciences, King's College London, London, United Kingdom; British Heart Foundation Centre of Research Excellence, King's College London, London, United Kingdom.
Ponnam S; British Heart Foundation Centre of Research Excellence, King's College London, London, United Kingdom; Randall Centre for Cell and Molecular Biophysics (School of Basic and Biosciences), King's College London, London, United Kingdom.
Holt MR; School of Cardiovascular and Metabolic Medicine and Sciences, King's College London, London, United Kingdom; British Heart Foundation Centre of Research Excellence, King's College London, London, United Kingdom.
Randall T; School of Cardiovascular and Metabolic Medicine and Sciences, King's College London, London, United Kingdom; British Heart Foundation Centre of Research Excellence, King's College London, London, United Kingdom.
Beckingham R; School of Cardiovascular and Metabolic Medicine and Sciences, King's College London, London, United Kingdom; British Heart Foundation Centre of Research Excellence, King's College London, London, United Kingdom.
Kho AL; British Heart Foundation Centre of Research Excellence, King's College London, London, United Kingdom; Randall Centre for Cell and Molecular Biophysics (School of Basic and Biosciences), King's College London, London, United Kingdom.
Kampourakis T; British Heart Foundation Centre of Research Excellence, King's College London, London, United Kingdom; Randall Centre for Cell and Molecular Biophysics (School of Basic and Biosciences), King's College London, London, United Kingdom.
Ehler E; School of Cardiovascular and Metabolic Medicine and Sciences, King's College London, London, United Kingdom; British Heart Foundation Centre of Research Excellence, King's College London, London, United Kingdom; Randall Centre for Cell and Molecular Biophysics (School of Basic and Biosciences), King's College London, London, United Kingdom. Electronic address: .
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Źródło:
The Journal of biological chemistry [J Biol Chem] 2024 Jan; Vol. 300 (1), pp. 105511. Date of Electronic Publication: 2023 Nov 30.
Typ publikacji:
Journal Article
MeSH Terms:
Cardiomyopathy, Hypertrophic*/genetics
Carrier Proteins*/genetics
Mutation, Missense*
Humans ; Protein Domains/genetics ; Protein Stability
Czasopismo naukowe
Tytuł:
Stabilization of the Metastable Pre-Fusion Conformation of the SARS-CoV-2 Spike Glycoprotein through N-Linked Glycosylation of the S2 Subunit.
Autorzy:
Zan, Fuwen (AUTHOR)
Zhou, Yao (AUTHOR)
Chen, Ting (AUTHOR)
Chen, Yahan (AUTHOR)
Mu, Zhixia (AUTHOR)
Qian, Zhaohui (AUTHOR)
Ou, Xiuyuan (AUTHOR)
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Źródło:
Viruses (1999-4915). Feb2024, Vol. 16 Issue 2, p223. 16p.
Czasopismo naukowe
Tytuł:
Sumoylation of SAP130 regulates its interaction with FAF1 as well as its protein stability and transcriptional repressor function.
Autorzy:
Chen, Chang-Han (AUTHOR)
Lin, Hung-Wei (AUTHOR)
Huang, Meng-Fang (AUTHOR)
Chiang, Chi-Wu (AUTHOR)
Lee, Kuen-Haur (AUTHOR)
Phuong, Nguyen Thanh (AUTHOR)
Cai, Zong-Yan (AUTHOR)
Chang, Wen-Chang (AUTHOR)
Lin, Ding-Yen (AUTHOR)
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Źródło:
BMC Molecular & Cell Biology. 1/4/2024, Vol. 25 Issue 1, p1-16. 16p.
Czasopismo naukowe
Tytuł:
Matrine Targets BTF3 to Inhibit the Growth of Canine Mammary Tumor Cells.
Autorzy:
Feng, Zijian (AUTHOR)
Sun, Na (AUTHOR)
Noor, Fida (AUTHOR)
Sun, Panpan (AUTHOR)
Zhang, Hua (AUTHOR)
Zhong, Jia (AUTHOR)
Yin, Wei (AUTHOR)
Fan, Kuohai (AUTHOR)
Yang, Huizhen (AUTHOR)
Zhang, Zhenbiao (AUTHOR)
Sun, Yaogui (AUTHOR)
Li, Hongquan (AUTHOR)
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Źródło:
International Journal of Molecular Sciences. Jan2024, Vol. 25 Issue 1, p540. 18p.
Czasopismo naukowe
Tytuł:
Impact of Confinement within a Hydrogel Mesh on Protein Thermodynamic Stability and Aggregation Kinetics.
Autorzy:
Ghassemi Z; Department of Chemical, Biochemical and Environmental Engineering, University of Maryland, Baltimore County, ECS 314, 1000 Hilltop Circle, Baltimore, Maryland 21250, United States.
Leach JB; Department of Chemical, Biochemical and Environmental Engineering, University of Maryland, Baltimore County, ECS 314, 1000 Hilltop Circle, Baltimore, Maryland 21250, United States.
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Źródło:
Molecular pharmaceutics [Mol Pharm] 2024 Mar 04; Vol. 21 (3), pp. 1137-1148. Date of Electronic Publication: 2024 Jan 26.
Typ publikacji:
Journal Article
MeSH Terms:
Hydrogels*/chemistry
Humans ; Thermodynamics ; Protein Conformation ; Protein Stability ; Kinetics
Czasopismo naukowe
Tytuł:
Stepwise introduction of stabilizing mutations reveals nonlinear additive effects in de novo TIM barrels.
Autorzy:
Koch JS; Department of Biochemistry, University of Bayreuth, Bayreuth, Germany.
Romero-Romero S; Department of Biochemistry, University of Bayreuth, Bayreuth, Germany.
Höcker B; Department of Biochemistry, University of Bayreuth, Bayreuth, Germany.
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Źródło:
Protein science : a publication of the Protein Society [Protein Sci] 2024 Mar; Vol. 33 (3), pp. e4926.
Typ publikacji:
Journal Article
MeSH Terms:
Proteins*/chemistry
Protein Folding*
Amino Acid Sequence ; Protein Stability ; Thermodynamics ; Mutation
Czasopismo naukowe
Tytuł:
DUSP4 maintains the survival and LSD1 protein stability in esophageal squamous cell carcinoma cells by inhibiting JNK signaling-dependent autophagy.
Autorzy:
Liu X; Department of Respiratory and Critical Care Medicine, The First Affiliated Hospital of Gannan Medical University, Ganzhou, 341000, Jiangxi, China.; Gannan Branch of National Clinical Research Center for Geriatrics Ganzhou 341000, Jiangxi, China.
Ye Z; Department of Digestive, The 900Th Hospital of Joint Logistic Support Force, PLA, Fuzhou, 350001, Fujian, China.
Rao D; Department of Thoracic Surgery, First Affiliated Hospital of Gannan Medical University, No. 3, Outangli, Xingannan Road, Zhanggong District, Ganzhou, 341000, Jiangxi, China.
Chen Q; Shengli Clinical Medical College of Fujian Medical University, Fuzhou, 350001, Fujian, China. .
Zhang Z; Department of Thoracic Surgery, First Affiliated Hospital of Gannan Medical University, No. 3, Outangli, Xingannan Road, Zhanggong District, Ganzhou, 341000, Jiangxi, China. .; Shengli Clinical Medical College of Fujian Medical University, Fuzhou, 350001, Fujian, China. .
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Źródło:
In vitro cellular & developmental biology. Animal [In Vitro Cell Dev Biol Anim] 2024 Mar; Vol. 60 (2), pp. 115-122. Date of Electronic Publication: 2024 Jan 29.
Typ publikacji:
Journal Article
MeSH Terms:
Esophageal Squamous Cell Carcinoma*/genetics
Esophageal Squamous Cell Carcinoma*/pathology
Esophageal Neoplasms*/genetics
Esophageal Neoplasms*/pathology
Animals ; Anisomycin ; Beclin-1/genetics ; Cell Line, Tumor ; Autophagy/genetics ; Proto-Oncogene Proteins c-bcl-2/metabolism ; Carcinogenesis/genetics ; Carcinogenesis/pathology ; Protein Stability ; Sirolimus/pharmacology ; Histone Demethylases/genetics ; Histone Demethylases/metabolism ; Cell Proliferation/genetics ; Gene Expression Regulation, Neoplastic
Czasopismo naukowe
Tytuł:
Potts Hamiltonian Models and Molecular Dynamics Free Energy Simulations for Predicting the Impact of Mutations on Protein Kinase Stability.
Autorzy:
Thakur A; Center for Biophysics and Computational Biology, Temple University, Philadelphia, Pennsylvania 19122, United States.; Department of Chemistry, Temple University, Philadelphia, Pennsylvania 19122, United States.
Gizzio J; Center for Biophysics and Computational Biology, Temple University, Philadelphia, Pennsylvania 19122, United States.; Department of Chemistry, Temple University, Philadelphia, Pennsylvania 19122, United States.
Levy RM; Center for Biophysics and Computational Biology, Temple University, Philadelphia, Pennsylvania 19122, United States.; Department of Chemistry, Temple University, Philadelphia, Pennsylvania 19122, United States.; Department of Physics, Temple University, Philadelphia, Pennsylvania 19122, United States.
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Źródło:
The journal of physical chemistry. B [J Phys Chem B] 2024 Feb 22; Vol. 128 (7), pp. 1656-1667. Date of Electronic Publication: 2024 Feb 13.
Typ publikacji:
Journal Article
MeSH Terms:
Molecular Dynamics Simulation*
Neoplasms*
Humans ; Protein Kinases/genetics ; Thermodynamics ; Mutation ; Protein Stability
Czasopismo naukowe

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