Temat: "RNA, Fungal" - OpacWWW

Skocz do pozycji: 1.

Tytuł:: A fungal RNA-dependent RNA polymerase is a novel player in plant infection and cross-kingdom RNA interference.
Autorzy:: Cheng AP; Institute of Genetics, Faculty of Biology, Ludwig Maximilian University of Munich, Martinsried, Germany.
Lederer B; Institute of Genetics, Faculty of Biology, Ludwig Maximilian University of Munich, Martinsried, Germany.
Oberkofler L; Institute of Genetics, Faculty of Biology, Ludwig Maximilian University of Munich, Martinsried, Germany.
Huang L; Institute of Genetics, Faculty of Biology, Ludwig Maximilian University of Munich, Martinsried, Germany.
Johnson NR; Centro de Genómica y Bioinformática, Facultad de Ciencias, Ingeniería y Tecnología, Universidad Mayor, Santiago, Chile.; ANID-Millennium Science Initiative Program-Millennium Institute for Integrative Biology (iBio), Santiago, Chile.
Platten F; Institute of Genetics, Faculty of Biology, Ludwig Maximilian University of Munich, Martinsried, Germany.
Dunker F; Institute of Genetics, Faculty of Biology, Ludwig Maximilian University of Munich, Martinsried, Germany.
Tisserant C; Institute of Genetics, Faculty of Biology, Ludwig Maximilian University of Munich, Martinsried, Germany.
Weiberg A; Institute of Genetics, Faculty of Biology, Ludwig Maximilian University of Munich, Martinsried, Germany.; Pokaż więcej
Źródło:: PLoS pathogens [PLoS Pathog] 2023 Dec 20; Vol. 19 (12), pp. e1011885. Date of Electronic Publication: 2023 Dec 20 (Print Publication: 2023).
Typ publikacji:: Journal Article
MeSH Terms:: RNA-Dependent RNA Polymerase*/genetics
Arabidopsis*/genetics
Arabidopsis*/microbiology
RNA Interference ; RNA, Small Interfering/genetics ; Virulence/genetics ; Plants/genetics ; Botrytis/genetics ; Plant Diseases/genetics ; Plant Diseases/microbiology ; RNA, Fungal/genetics ; RNA, Plant

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Skocz do pozycji: 2.

Tytuł:: Transcriptional neighborhoods regulate transcript isoform lengths and expression levels.
Autorzy:: Brooks AN; European Molecular Biology Laboratory (EMBL), Genome Biology Unit, 69117 Heidelberg, Germany.
Hughes AL; European Molecular Biology Laboratory (EMBL), Genome Biology Unit, 69117 Heidelberg, Germany.
Clauder-Münster S; European Molecular Biology Laboratory (EMBL), Genome Biology Unit, 69117 Heidelberg, Germany.
Mitchell LA; Institute for Systems Genetics and Department of Biochemistry and Molecular Pharmacology, NYU Langone Health, New York, NY 10016, USA.
Boeke JD; Institute for Systems Genetics and Department of Biochemistry and Molecular Pharmacology, NYU Langone Health, New York, NY 10016, USA.; Department of Biomedical Engineering, NYU Tandon School of Engineering, Brooklyn, NY 11201, USA.
Steinmetz LM; European Molecular Biology Laboratory (EMBL), Genome Biology Unit, 69117 Heidelberg, Germany.; Stanford Genome Technology Center, Stanford University, Palo Alto, CA 94304, USA.; Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA.; Pokaż więcej
Źródło:: Science (New York, N.Y.) [Science] 2022 Mar 04; Vol. 375 (6584), pp. 1000-1005. Date of Electronic Publication: 2022 Mar 03.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Genome, Fungal*
Transcription, Genetic*
Transcriptome*
RNA, Fungal/*genetics
RNA, Messenger/*genetics
Saccharomyces cerevisiae/*genetics
3' Untranslated Regions ; Base Sequence ; Gene Rearrangement ; Genetic Variation ; RNA, Fungal/chemistry ; RNA, Fungal/metabolism ; RNA, Messenger/chemistry ; RNA, Messenger/metabolism ; RNA-Seq ; Sequence Analysis, RNA

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Skocz do pozycji: 3.

Tytuł:: Discovery of microRNA-like Small RNAs in Pathogenic Plant Fungus Verticillium nonalfalfae Using High-Throughput Sequencing and qPCR and RLM-RACE Validation.
Autorzy:: Jeseničnik T; Department of Agronomy, Biotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.
Štajner N; Department of Agronomy, Biotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.
Radišek S; Plant Protection Department, Slovenian Institute of Hop Research and Brewing, 3310 Žalec, Slovenia.
Mishra AK; Biology Centre of the Czech Academy of Sciences, Department of Molecular Genetics, Institute of Plant Molecular Biology, Branišovská 31, 37005 České Budějovice, Czech Republic.
Košmelj K; Department of Agronomy, Biotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.
Kunej U; Department of Agronomy, Biotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.
Jakše J; Department of Agronomy, Biotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2022 Jan 14; Vol. 23 (2). Date of Electronic Publication: 2022 Jan 14.
Typ publikacji:: Journal Article
MeSH Terms:: High-Throughput Nucleotide Sequencing*
RNA, Fungal*
Ascomycota/*genetics
MicroRNAs/*genetics
RNA, Small Untranslated/*genetics
Computational Biology/methods ; Gene Expression Profiling ; Gene Expression Regulation, Fungal ; Gene Ontology ; Host-Pathogen Interactions ; Nucleic Acid Conformation ; Phylogeny ; Plant Diseases/microbiology ; Real-Time Polymerase Chain Reaction ; Reproducibility of Results
SCR Organism:: Verticillium nonalfalfae

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Skocz do pozycji: 4.

Tytuł:: Role of SSD1 in Phenotypic Variation of Saccharomyces cerevisiae Strains Lacking DEG1 -Dependent Pseudouridylation.
Autorzy:: Khonsari B; Institut für Biologie, Fachgebiet Mikrobiologie, Universität Kassel, Heinrich-Plett-Str. 40, D-34132 Kassel, Germany.
Klassen R; Institut für Biologie, Fachgebiet Mikrobiologie, Universität Kassel, Heinrich-Plett-Str. 40, D-34132 Kassel, Germany.
Schaffrath R; Institut für Biologie, Fachgebiet Mikrobiologie, Universität Kassel, Heinrich-Plett-Str. 40, D-34132 Kassel, Germany.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2021 Aug 15; Vol. 22 (16). Date of Electronic Publication: 2021 Aug 15.
Typ publikacji:: Journal Article
MeSH Terms:: RNA, Fungal*/genetics
RNA, Fungal*/metabolism
RNA, Transfer*/genetics
RNA, Transfer*/metabolism
Saccharomyces cerevisiae*/genetics
Saccharomyces cerevisiae*/metabolism
Saccharomyces cerevisiae Proteins*/genetics
Saccharomyces cerevisiae Proteins*/metabolism
Intramolecular Transferases/*deficiency
RNA Processing, Post-Transcriptional/*genetics
Biological Variation, Population ; Intramolecular Transferases/genetics

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Skocz do pozycji: 5.

Tytuł:: Overlapping regions of Caf20 mediate its interactions with the mRNA-5'cap-binding protein eIF4E and with ribosomes.
Autorzy:: Nwokoye EC; Division of Molecular and Cellular Function, School of Biological Sciences, Faculty of Biology, Medicine and Health, Manchester Academic Health Science Centre, The University of Manchester, Manchester, M13 9PT, UK.; Department of Botany, Nnamdi Azikiwe University, Awka, Nigeria.
AlNaseem E; Division of Molecular and Cellular Function, School of Biological Sciences, Faculty of Biology, Medicine and Health, Manchester Academic Health Science Centre, The University of Manchester, Manchester, M13 9PT, UK.
Crawford RA; Division of Molecular and Cellular Function, School of Biological Sciences, Faculty of Biology, Medicine and Health, Manchester Academic Health Science Centre, The University of Manchester, Manchester, M13 9PT, UK.
Castelli LM; Division of Molecular and Cellular Function, School of Biological Sciences, Faculty of Biology, Medicine and Health, Manchester Academic Health Science Centre, The University of Manchester, Manchester, M13 9PT, UK.; Department of Neuroscience, Sheffield Institute for Translational Neuroscience (SITraN), University of Sheffield, Sheffield, S10 2HQ, UK.
Jennings MD; Division of Molecular and Cellular Function, School of Biological Sciences, Faculty of Biology, Medicine and Health, Manchester Academic Health Science Centre, The University of Manchester, Manchester, M13 9PT, UK.
Kershaw CJ; Division of Molecular and Cellular Function, School of Biological Sciences, Faculty of Biology, Medicine and Health, Manchester Academic Health Science Centre, The University of Manchester, Manchester, M13 9PT, UK.
Pavitt GD; Division of Molecular and Cellular Function, School of Biological Sciences, Faculty of Biology, Medicine and Health, Manchester Academic Health Science Centre, The University of Manchester, Manchester, M13 9PT, UK. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2021 Jun 29; Vol. 11 (1), pp. 13467. Date of Electronic Publication: 2021 Jun 29.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Eukaryotic Initiation Factor-4E/*chemistry
RNA, Fungal/*chemistry
RNA, Messenger/*chemistry
Ribosomes/*chemistry
Saccharomyces cerevisiae/*chemistry
Saccharomyces cerevisiae Proteins/*chemistry
Transcription Factors/*chemistry
Eukaryotic Initiation Factor-4E/genetics ; Eukaryotic Initiation Factor-4E/metabolism ; Mutation ; RNA, Fungal/genetics ; RNA, Fungal/metabolism ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Ribosomes/genetics ; Ribosomes/metabolism ; Saccharomyces cerevisiae/genetics ; Saccharomyces cerevisiae/metabolism ; Saccharomyces cerevisiae Proteins/genetics ; Saccharomyces cerevisiae Proteins/metabolism ; Transcription Factors/genetics ; Transcription Factors/metabolism

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Skocz do pozycji: 6.

Tytuł:: Organellar Introns in Fungi, Algae, and Plants.
Autorzy:: Mukhopadhyay J; Department of Microbiology, University of Manitoba, Winnipeg, MB R3T 2N2, Canada.
Hausner G; Department of Microbiology, University of Manitoba, Winnipeg, MB R3T 2N2, Canada.; Pokaż więcej
Źródło:: Cells [Cells] 2021 Aug 06; Vol. 10 (8). Date of Electronic Publication: 2021 Aug 06.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't; Review
MeSH Terms:: Introns*
Organelles/*genetics
RNA, Algal/*genetics
RNA, Fungal/*genetics
RNA, Plant/*genetics
RNA, Untranslated/*genetics
Evolution, Molecular ; Gene Expression Regulation, Fungal ; Gene Expression Regulation, Plant ; Genome, Fungal ; Genome, Plant ; Organelles/metabolism ; RNA Splicing ; RNA Stability ; RNA, Algal/metabolism ; RNA, Fungal/metabolism ; RNA, Plant/metabolism ; RNA, Untranslated/metabolism ; Transcription, Genetic

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Skocz do pozycji: 7.

Tytuł:: Fusarium graminearum DICER-like-dependent sRNAs are required for the suppression of host immune genes and full virulence.
Autorzy:: Werner BT; Institute of Phytopathology, Centre for BioSystems, Land Use and Nutrition, Justus Liebig University, Giessen, Germany.
Koch A; Institute for Phytomedicine, University of Hohenheim, Stuttgart, Germany.
Šečić E; Institute of Phytopathology, Centre for BioSystems, Land Use and Nutrition, Justus Liebig University, Giessen, Germany.
Engelhardt J; Institute of Phytopathology, Centre for BioSystems, Land Use and Nutrition, Justus Liebig University, Giessen, Germany.
Jelonek L; Institute of Bioinformatics and Systems Biology, Justus Liebig University, Giessen, Germany.
Steinbrenner J; Institute of Phytopathology, Centre for BioSystems, Land Use and Nutrition, Justus Liebig University, Giessen, Germany.
Kogel KH; Institute of Phytopathology, Centre for BioSystems, Land Use and Nutrition, Justus Liebig University, Giessen, Germany.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2021 Aug 05; Vol. 16 (8), pp. e0252365. Date of Electronic Publication: 2021 Aug 05 (Print Publication: 2021).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Brachypodium*/metabolism
Brachypodium*/microbiology
Hordeum*/metabolism
Hordeum*/microbiology
Host-Pathogen Interactions*
Fusarium/*physiology
Plant Diseases/*microbiology
RNA, Fungal/*metabolism
Ribonuclease III/*metabolism
Virulence Factors/*metabolism
Fungal Proteins ; Plant Diseases/genetics ; RNA, Fungal/genetics ; Ribonuclease III/genetics ; Virulence Factors/genetics
SCR Organism:: Fusarium graminearum

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Skocz do pozycji: 8.

Tytuł:: Site-specific analysis reveals candidate cross-kingdom small RNAs, tRNA and rRNA fragments, and signs of fungal RNA phasing in the barley-powdery mildew interaction.
Autorzy:: Kusch S; Unit of Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University, Aachen, Germany.
Singh M; Unit of Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University, Aachen, Germany.
Thieron H; Unit of Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University, Aachen, Germany.
Spanu PD; Unit of Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University, Aachen, Germany.
Panstruga R; Unit of Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University, Aachen, Germany.; Pokaż więcej
Źródło:: Molecular plant pathology [Mol Plant Pathol] 2023 Jun; Vol. 24 (6), pp. 570-587. Date of Electronic Publication: 2023 Mar 14.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Ascomycota*/genetics
Ascomycota*/metabolism
Hordeum*/microbiology
RNA, Fungal/genetics ; RNA, Transfer ; RNA Interference ; Plant Diseases/microbiology ; Plant Proteins/metabolism

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Skocz do pozycji: 9.

Tytuł:: 2'O-Ribose Methylation of Ribosomal RNAs: Natural Diversity in Living Organisms, Biological Processes, and Diseases.
Autorzy:: Jaafar M; Inserm U1052, CNRS UMR5286, Centre de Recherche en Cancérologie de Lyon, Université de Lyon, Université Claude Bernard Lyon 1, Centre Léon Bérard, CEDEX 08, F-69373 Lyon, France.
Paraqindes H; Inserm U1052, CNRS UMR5286, Centre de Recherche en Cancérologie de Lyon, Université de Lyon, Université Claude Bernard Lyon 1, Centre Léon Bérard, CEDEX 08, F-69373 Lyon, France.
Gabut M; Inserm U1052, CNRS UMR5286, Centre de Recherche en Cancérologie de Lyon, Université de Lyon, Université Claude Bernard Lyon 1, Centre Léon Bérard, CEDEX 08, F-69373 Lyon, France.
Diaz JJ; Inserm U1052, CNRS UMR5286, Centre de Recherche en Cancérologie de Lyon, Université de Lyon, Université Claude Bernard Lyon 1, Centre Léon Bérard, CEDEX 08, F-69373 Lyon, France.
Marcel V; Inserm U1052, CNRS UMR5286, Centre de Recherche en Cancérologie de Lyon, Université de Lyon, Université Claude Bernard Lyon 1, Centre Léon Bérard, CEDEX 08, F-69373 Lyon, France.
Durand S; Inserm U1052, CNRS UMR5286, Centre de Recherche en Cancérologie de Lyon, Université de Lyon, Université Claude Bernard Lyon 1, Centre Léon Bérard, CEDEX 08, F-69373 Lyon, France.; Pokaż więcej
Źródło:: Cells [Cells] 2021 Jul 31; Vol. 10 (8). Date of Electronic Publication: 2021 Jul 31.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't; Review
MeSH Terms:: Evolution, Molecular*
RNA Processing, Post-Transcriptional*
RNA, Fungal/*metabolism
RNA, Ribosomal/*metabolism
Ribosomes/*metabolism
Yeasts/*metabolism
Animals ; Cell Line ; Humans ; Methylation ; Protein Biosynthesis ; RNA, Fungal/genetics ; RNA, Ribosomal/genetics ; Ribosomes/genetics ; Yeasts/genetics

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Skocz do pozycji: 10.

Tytuł:: Identification of microRNA-like RNAs from Trichoderma asperellum DQ-1 during its interaction with tomato roots using bioinformatic analysis and high-throughput sequencing.
Autorzy:: Wang W; Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, Hainan, PR China.; Key Laboratory of Germplasm Resources of Tropical Special Ornamental Plants of Hainan Province, College of Forestry, Haikou, Hainan, PR China.
Zhang F; Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, Hainan, PR China.
Cui J; Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, Hainan, PR China.
Chen D; Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, Hainan, PR China.
Liu Z; Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, Hainan, PR China.
Hou J; Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, Hainan, PR China.
Zhang R; Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, Hainan, PR China.
Liu T; Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, Hainan, PR China.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2021 Jul 22; Vol. 16 (7), pp. e0254808. Date of Electronic Publication: 2021 Jul 22 (Print Publication: 2021).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Host-Pathogen Interactions/*physiology
Hypocreales/*physiology
Solanum lycopersicum/*microbiology
MicroRNAs/*biosynthesis
Plant Roots/*microbiology
RNA, Fungal/*biosynthesis
Disease Resistance/physiology ; MicroRNAs/genetics ; RNA, Fungal/genetics
SCR Organism:: Trichoderma asperellum

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Skocz do pozycji: 11.

Tytuł:: lncRNA transcription induces meiotic recombination through chromatin remodelling in fission yeast.
Autorzy:: Senmatsu S; Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, Hachioji-shi, Tokyo, Japan.
Asada R; Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, Hachioji-shi, Tokyo, Japan.; Department of Viticulture and Enology, University of California, Davis, Davis, CA, USA.
Oda A; Department of Life Sciences, The University of Tokyo, Meguro-ku, Tokyo, Japan.
Hoffman CS; Biology Department, Boston College, Chestnut Hill, MA, USA.
Ohta K; Department of Life Sciences, The University of Tokyo, Meguro-ku, Tokyo, Japan.; Universal Biology Institute, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Hirota K; Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, Hachioji-shi, Tokyo, Japan. .; Pokaż więcej
Źródło:: Communications biology [Commun Biol] 2021 Mar 05; Vol. 4 (1), pp. 295. Date of Electronic Publication: 2021 Mar 05.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Chromatin Assembly and Disassembly*
Meiosis*
Recombinational DNA Repair*
Transcription, Genetic*
RNA, Fungal/*genetics
RNA, Long Noncoding/*genetics
Schizosaccharomyces/*genetics
DNA Breaks, Double-Stranded ; Fructose-Bisphosphatase/genetics ; Fructose-Bisphosphatase/metabolism ; Gene Expression Regulation, Fungal ; RNA, Fungal/metabolism ; RNA, Long Noncoding/metabolism ; Schizosaccharomyces/growth & development ; Schizosaccharomyces/metabolism ; Schizosaccharomyces pombe Proteins/genetics ; Schizosaccharomyces pombe Proteins/metabolism

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Skocz do pozycji: 12.

Tytuł:: Yeast Telomerase RNA Flexibly Scaffolds Protein Subunits: Results and Repercussions.
Autorzy:: Zappulla DC; Department of Biological Sciences, Lehigh University, Bethlehem, PA 18015, USA.; Pokaż więcej
Źródło:: Molecules (Basel, Switzerland) [Molecules] 2020 Jun 14; Vol. 25 (12). Date of Electronic Publication: 2020 Jun 14.
Typ publikacji:: Journal Article; Review
MeSH Terms:: Protein Subunits*/chemistry
Protein Subunits*/metabolism
RNA*/chemistry
RNA*/metabolism
RNA, Fungal*/chemistry
RNA, Fungal*/metabolism
Ribonucleoproteins*/chemistry
Ribonucleoproteins*/metabolism
Saccharomyces cerevisiae*/chemistry
Saccharomyces cerevisiae*/metabolism
Saccharomyces cerevisiae Proteins*/chemistry
Saccharomyces cerevisiae Proteins*/metabolism
Telomerase*/chemistry
Telomerase*/metabolism

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Skocz do pozycji: 13.

Tytuł:: Plant-pathogen interactions: MicroRNA-mediated trans-kingdom gene regulation in fungi and their host plants.
Autorzy:: Mathur M; Biochemical Sciences Division, CSIR-National Chemical Laboratory, Pune 411008, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India.
Nair A; Biochemical Sciences Division, CSIR-National Chemical Laboratory, Pune 411008, India.
Kadoo N; Biochemical Sciences Division, CSIR-National Chemical Laboratory, Pune 411008, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India. Electronic address: .; Pokaż więcej
Źródło:: Genomics [Genomics] 2020 Sep; Vol. 112 (5), pp. 3021-3035. Date of Electronic Publication: 2020 May 23.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Regulation*
Host-Pathogen Interactions/*genetics
MicroRNAs/*metabolism
Plants/*microbiology
RNA, Fungal/*metabolism
RNA, Plant/*metabolism
Ascomycota/genetics ; Basidiomycota/genetics ; Cicer/genetics ; Cicer/microbiology ; Fusarium/genetics ; Gene Expression Regulation, Fungal ; MicroRNAs/chemistry ; Plants/genetics ; RNA, Fungal/chemistry ; Transcriptome
SCR Organism:: Fusarium oxysporum

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Skocz do pozycji: 14.

Tytuł:: Comparison of RNA isolation methods on RNA-Seq: implications for differential expression and meta-analyses.
Autorzy:: Scholes AN; Department of Biological Sciences, University of Arkansas, Fayetteville, AR, USA.; Interdisciplinary Graduate Program in Cell and Molecular Biology, University of Arkansas, Fayetteville, AR, USA.
Lewis JA; Department of Biological Sciences, University of Arkansas, Fayetteville, AR, USA. .; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2020 Mar 20; Vol. 21 (1), pp. 249. Date of Electronic Publication: 2020 Mar 20.
Typ publikacji:: Comparative Study; Journal Article
MeSH Terms:: Chemical Fractionation/*methods
RNA, Fungal/*isolation & purification
Saccharomyces cerevisiae/*genetics
Gene Expression Profiling ; Gene Expression Regulation, Fungal ; High-Throughput Nucleotide Sequencing ; Phenol/chemistry ; RNA, Fungal/antagonists & inhibitors ; Research Design ; Sequence Analysis, RNA

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Skocz do pozycji: 15.

Tytuł:: A composite consisting of a deep eutectic solvent and dispersed magnetic metal-organic framework (type UiO-66-NH 2 ) for solid-phase extraction of RNA.
Autorzy:: Meng J; State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, People's Republic of China.
Wang Y; State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, People's Republic of China. .
Zhou Y; Department of Microbiology, College of Basic Medicine, Central South University, Changsha, 410083, People's Republic of China. .
Chen J; State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, People's Republic of China.
Wei X; State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, People's Republic of China.
Ni R; State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, People's Republic of China.
Liu Z; State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, People's Republic of China.
Xu F; State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, People's Republic of China.; Pokaż więcej
Źródło:: Mikrochimica acta [Mikrochim Acta] 2019 Dec 17; Vol. 187 (1), pp. 58. Date of Electronic Publication: 2019 Dec 17.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Solid Phase Extraction*
Magnetite Nanoparticles/*chemistry
Metal-Organic Frameworks/*chemistry
RNA, Fungal/*isolation & purification
Adsorption ; Magnetic Phenomena ; Molecular Structure ; Particle Size ; RNA, Fungal/chemistry ; Saccharomyces cerevisiae/chemistry ; Solvents/chemistry ; Surface Properties

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Skocz do pozycji: 16.

Tytuł:: Nucleic acids enrichment of fungal pathogens to study host-pathogen interactions.
Autorzy:: Rodríguez A; Laboratory Bacteriology Research, Department of Diagnostic Sciences, Faculty of Medicine and Health Sciences, Ghent University, Ghent, 9000, Belgium. .
Guillemyn B; Center for Medical Genetics Ghent, Ghent University Hospital, Department of Biomolecular Medicine, Ghent, 9000, Belgium.
Coucke P; Center for Medical Genetics Ghent, Ghent University Hospital, Department of Biomolecular Medicine, Ghent, 9000, Belgium.
Vaneechoutte M; Laboratory Bacteriology Research, Department of Diagnostic Sciences, Faculty of Medicine and Health Sciences, Ghent University, Ghent, 9000, Belgium.; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2019 Dec 02; Vol. 9 (1), pp. 18037. Date of Electronic Publication: 2019 Dec 02.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Candida albicans/*genetics
DNA, Fungal/*isolation & purification
Gene Expression Profiling/*methods
Host-Pathogen Interactions/*genetics
RNA, Fungal/*isolation & purification
Candida albicans/isolation & purification ; Candidiasis/blood ; Candidiasis/microbiology ; Colony Count, Microbial ; DNA, Fungal/genetics ; Gene Expression Regulation, Fungal ; Humans ; Leukocytes, Mononuclear/microbiology ; RNA, Fungal/genetics ; Real-Time Polymerase Chain Reaction/methods ; Reverse Transcriptase Polymerase Chain Reaction/methods

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Skocz do pozycji: 17.

Tytuł:: Identification and characterization of circular RNAs in Ganoderma lucidum.
Autorzy:: Shao J; Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 151 Malianwa North Road, Haidian District, Beijing, 100193, P.R. China.
Wang L; Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 151 Malianwa North Road, Haidian District, Beijing, 100193, P.R. China.
Liu X; School of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing, 100029, P.R. China.
Yang M; Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 151 Malianwa North Road, Haidian District, Beijing, 100193, P.R. China.
Chen H; Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 151 Malianwa North Road, Haidian District, Beijing, 100193, P.R. China.
Wu B; Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 151 Malianwa North Road, Haidian District, Beijing, 100193, P.R. China. .
Liu C; Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 151 Malianwa North Road, Haidian District, Beijing, 100193, P.R. China. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2019 Nov 11; Vol. 9 (1), pp. 16522. Date of Electronic Publication: 2019 Nov 11.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: RNA, Circular*
RNA, Fungal*
Reishi/*genetics
Computational Biology/methods ; Exons ; Gene Expression Profiling ; Gene Expression Regulation, Fungal ; Gene Library ; Gene Ontology ; RNA Splicing ; RNA, Long Noncoding/genetics ; Reproducibility of Results

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Skocz do pozycji: 18.

Tytuł:: Targeted enrichment outperforms other enrichment techniques and enables more multi-species RNA-Seq analyses.
Autorzy:: Chung M; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.
Teigen L; University of Wisconsin Oshkosh, Oshkosh, WI, 54901, USA.
Liu H; Division of Infectious Diseases, Los Angeles Biomedical Research Institute at Harbor-UCLA Medical Center, Torrance, California, 90502, USA.
Libro S; New England Biolabs, Ipswich, MA, 01938, USA.
Shetty A; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.
Kumar N; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.
Zhao X; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.
Bromley RE; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.
Tallon LJ; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.
Sadzewicz L; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.
Fraser CM; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.; Department of Medicine, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.
Rasko DA; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.
Filler SG; Division of Infectious Diseases, Los Angeles Biomedical Research Institute at Harbor-UCLA Medical Center, Torrance, California, 90502, USA.; David Geffen School of Medicine at UCLA, Los Angeles, California, 90502, USA.
Foster JM; New England Biolabs, Ipswich, MA, 01938, USA.
Michalski ML; University of Wisconsin Oshkosh, Oshkosh, WI, 54901, USA.
Bruno VM; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.
Dunning Hotopp JC; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, 21201, USA. .; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA. .; Greenebaum Cancer Center, University of Maryland, Baltimore, MD, 21201, USA. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2018 Sep 06; Vol. 8 (1), pp. 13377. Date of Electronic Publication: 2018 Sep 06.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:: RNA, Bacterial*/chemistry
RNA, Bacterial*/genetics
RNA, Bacterial*/isolation & purification
RNA, Fungal*/chemistry
RNA, Fungal*/genetics
RNA, Fungal*/isolation & purification
RNA, Helminth*/chemistry
RNA, Helminth*/genetics
RNA, Helminth*/isolation & purification
RNA, Messenger*/chemistry
RNA, Messenger*/genetics
RNA, Messenger*/isolation & purification
Aspergillus fumigatus/*genetics
Brugia malayi/*genetics
Sequence Analysis, RNA/*methods
Wolbachia/*genetics
Animals

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Skocz do pozycji: 19.

Tytuł:: Identification of the Novel Nup188-brr7 Allele in a Screen for Cold-Sensitive mRNA Export Mutants in Saccharomyces cerevisiae .
Autorzy:: de Bruyn Kops A; Department of Biochemistry and Biophysics, UCSF, San Francisco, CA 94143 .
Guthrie C; Department of Biochemistry and Biophysics, UCSF, San Francisco, CA 94143 .; Pokaż więcej
Źródło:: G3 (Bethesda, Md.) [G3 (Bethesda)] 2018 Aug 30; Vol. 8 (9), pp. 2991-3003. Date of Electronic Publication: 2018 Aug 30.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Alleles*
Cold Temperature*
Nuclear Pore Complex Proteins*/genetics
Nuclear Pore Complex Proteins*/metabolism
RNA, Fungal*/genetics
RNA, Fungal*/metabolism
RNA, Messenger*/genetics
RNA, Messenger*/metabolism
Saccharomyces cerevisiae*/genetics
Saccharomyces cerevisiae*/metabolism
Saccharomyces cerevisiae Proteins*/genetics
Saccharomyces cerevisiae Proteins*/metabolism
Biological Transport, Active/physiology

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Skocz do pozycji: 20.

Tytuł:: Development of a lateral flow recombinase polymerase amplification assay for rapid and visual detection of Cryptococcus neoformans/C. gattii in cerebral spinal fluid.
Autorzy:: Ma Q; Institute of Maternity and Child Medical Research, Shenzhen Maternity and Child Healthcare Hospital, Southern Medical University, No.2004 Hongli Road, Shenzhen, 518028, Guangdong, China.; Clinical Laboratory, Shenzhen Third People's Hospital, No.29 Bulan Road, Shenzhen, 518112, Guangdong, China.
Yao J; Institute of Maternity and Child Medical Research, Shenzhen Maternity and Child Healthcare Hospital, Southern Medical University, No.2004 Hongli Road, Shenzhen, 518028, Guangdong, China.
Yuan S; Institute of Maternity and Child Medical Research, Shenzhen Maternity and Child Healthcare Hospital, Southern Medical University, No.2004 Hongli Road, Shenzhen, 518028, Guangdong, China.
Liu H; Clinical Laboratory, Shenzhen Third People's Hospital, No.29 Bulan Road, Shenzhen, 518112, Guangdong, China.
Wei N; Personnel Section, Shenzhen Maternity and Child Healthcare Hospital, Southern Medical University, No.2004 Hongli Road, Shenzhen, 518028, Guangdong, China. .
Zhang J; Institute of Maternity and Child Medical Research, Shenzhen Maternity and Child Healthcare Hospital, Southern Medical University, No.2004 Hongli Road, Shenzhen, 518028, Guangdong, China. szmch_.
Shan W; Clinical Laboratory, Shenzhen Third People's Hospital, No.29 Bulan Road, Shenzhen, 518112, Guangdong, China. wanshui_.; Pokaż więcej
Źródło:: BMC infectious diseases [BMC Infect Dis] 2019 Feb 04; Vol. 19 (1), pp. 108. Date of Electronic Publication: 2019 Feb 04.
Typ publikacji:: Evaluation Study; Journal Article
MeSH Terms:: Cryptococcosis/*diagnosis
Cryptococcus gattii/*isolation & purification
Cryptococcus neoformans/*isolation & purification
Meningitis, Cryptococcal/*diagnosis
Polymerase Chain Reaction/*methods
RNA, Fungal/*cerebrospinal fluid
Antigens, Fungal/cerebrospinal fluid ; Antigens, Fungal/genetics ; Cryptococcosis/cerebrospinal fluid ; Cryptococcus gattii/genetics ; Cryptococcus neoformans/genetics ; DNA Primers/genetics ; Early Diagnosis ; Humans ; Limit of Detection ; Meningitis, Cryptococcal/cerebrospinal fluid ; Microfluidic Analytical Techniques/methods ; RNA, Fungal/analysis ; Recombinases/genetics ; Sensitivity and Specificity ; Temperature

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