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Tytuł:
A non-canonical RNA degradation pathway suppresses RNAi-dependent epimutations in the human fungal pathogen Mucor circinelloides.
Autorzy:
Calo S; Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, North Carolina, United States of America.
Nicolás FE; Department of Genetics and Microbiology, Faculty of Biology, University of Murcia, Murcia, Spain.
Lee SC; Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, North Carolina, United States of America.
Vila A; Department of Genetics and Microbiology, Faculty of Biology, University of Murcia, Murcia, Spain.
Cervantes M; Department of Genetics and Microbiology, Faculty of Biology, University of Murcia, Murcia, Spain.
Torres-Martinez S; Department of Genetics and Microbiology, Faculty of Biology, University of Murcia, Murcia, Spain.
Ruiz-Vazquez RM; Department of Genetics and Microbiology, Faculty of Biology, University of Murcia, Murcia, Spain.
Cardenas ME; Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, North Carolina, United States of America.
Heitman J; Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, North Carolina, United States of America.
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Źródło:
PLoS genetics [PLoS Genet] 2017 Mar 24; Vol. 13 (3), pp. e1006686. Date of Electronic Publication: 2017 Mar 24 (Print Publication: 2017).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Mutation*
RNA Interference*
Mucor/*genetics
RNA, Fungal/*genetics
Amino Acid Sequence ; Drug Resistance, Fungal/drug effects ; Drug Resistance, Fungal/genetics ; Fungal Proteins/genetics ; Fungal Proteins/metabolism ; Gene Expression Regulation, Fungal ; Host-Pathogen Interactions ; Humans ; Immunosuppressive Agents/pharmacology ; Models, Genetic ; Mucormycosis/microbiology ; RNA Stability ; RNA, Fungal/metabolism ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Signal Transduction/genetics ; Tacrolimus/pharmacology
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Subgenic Pol II interactomes identify region-specific transcription elongation regulators.
Autorzy:
Harlen KM; Department of Genetics, Harvard Medical School, Boston, MA, USA.
Churchman LS; Department of Genetics, Harvard Medical School, Boston, MA, USA .
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Źródło:
Molecular systems biology [Mol Syst Biol] 2017 Jan 02; Vol. 13 (1), pp. 900. Date of Electronic Publication: 2017 Jan 02.
Typ publikacji:
Journal Article
MeSH Terms:
Nuclear Proteins/*metabolism
RNA Polymerase II/*metabolism
RNA, Fungal/*genetics
Saccharomyces cerevisiae/*genetics
Saccharomyces cerevisiae Proteins/*metabolism
Transcriptional Elongation Factors/*metabolism
Mass Spectrometry ; Promoter Regions, Genetic ; RNA, Fungal/metabolism ; RNA-Binding Proteins ; Saccharomyces cerevisiae/metabolism ; Sequence Analysis, RNA ; Transcription Factors/metabolism ; Transcription, Genetic
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Saccharomyces cerevisiae , a Powerful Model for Studying rRNA Modifications and Their Effects on Translation Fidelity.
Autorzy:
Baudin-Baillieu A; Institute for Integrative Biology of the Cell (I2BC), Université Paris-Saclay, CEA, CNRS, 91198 Gif-sur-Yvette, France.
Namy O; Institute for Integrative Biology of the Cell (I2BC), Université Paris-Saclay, CEA, CNRS, 91198 Gif-sur-Yvette, France.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2021 Jul 10; Vol. 22 (14). Date of Electronic Publication: 2021 Jul 10.
Typ publikacji:
Journal Article; Review
MeSH Terms:
Models, Biological*
RNA Processing, Post-Transcriptional*
RNA, Fungal/*genetics
RNA, Ribosomal/*genetics
Ribosomes/*metabolism
Saccharomyces cerevisiae/*genetics
Saccharomyces cerevisiae Proteins/*metabolism
Humans ; Ribosomes/genetics ; Saccharomyces cerevisiae/growth & development ; Saccharomyces cerevisiae Proteins/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Risk factors and biofilm formation analyses of hospital-acquired infection of Candida pelliculosa in a neonatal intensive care unit.
Autorzy:
Zhang Z; Department of Laboratory Medicine of Shengjing Hospital of China Medical University, 36 Sanhao Street, Heping District, Shenyang, China.
Cao Y; Department of Laboratory Medicine of Shengjing Hospital of China Medical University, 36 Sanhao Street, Heping District, Shenyang, China.
Li Y; College of Life and Health Sciences, Northeastern University, 195, Chuangxin Road, Hunnan District, Shenyang, China.
Chen X; Department of Laboratory Medicine of Shengjing Hospital of China Medical University, 36 Sanhao Street, Heping District, Shenyang, China.
Ding C; College of Life and Health Sciences, Northeastern University, 195, Chuangxin Road, Hunnan District, Shenyang, China.
Liu Y; Department of Laboratory Medicine of Shengjing Hospital of China Medical University, 36 Sanhao Street, Heping District, Shenyang, China. .
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Źródło:
BMC infectious diseases [BMC Infect Dis] 2021 Jun 29; Vol. 21 (1), pp. 620. Date of Electronic Publication: 2021 Jun 29.
Typ publikacji:
Journal Article
MeSH Terms:
Biofilms*
Intensive Care Units, Neonatal*
Candidiasis/*epidemiology
Candidiasis/*prevention & control
Cross Infection/*epidemiology
Cross Infection/*prevention & control
Disease Outbreaks/*prevention & control
Equipment and Supplies/*microbiology
Saccharomycetales/*genetics
Antifungal Agents/therapeutic use ; Candidiasis/drug therapy ; Candidiasis/microbiology ; Case-Control Studies ; China/epidemiology ; Cross Infection/drug therapy ; Cross Infection/microbiology ; Female ; Health Personnel ; Humans ; Infant, Newborn ; Infection Control/methods ; Length of Stay ; Male ; Microbial Sensitivity Tests ; RNA, Fungal/genetics ; Risk Factors ; Saccharomycetales/isolation & purification
SCR Organism:
Wickerhamomyces anomalus
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
A Novel Model for the RNase MRP-Induced Switch between the Formation of Different Forms of 5.8S rRNA.
Autorzy:
Li X; Department of Biological Sciences, University of Maryland Baltimore County (UMBC), 1000 Hilltop Circle, Baltimore, MD 21250, USA.; Department of Biology, University of Rochester, Rochester, NY 14627, USA.
Zengel JM; Department of Biological Sciences, University of Maryland Baltimore County (UMBC), 1000 Hilltop Circle, Baltimore, MD 21250, USA.
Lindahl L; Department of Biological Sciences, University of Maryland Baltimore County (UMBC), 1000 Hilltop Circle, Baltimore, MD 21250, USA.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2021 Jun 22; Vol. 22 (13). Date of Electronic Publication: 2021 Jun 22.
Typ publikacji:
Journal Article
MeSH Terms:
RNA, Ribosomal, 5.8S/*genetics
RNA, Ribosomal, 5.8S/*metabolism
DNA, Ribosomal Spacer ; Endoribonucleases ; Gene Expression Regulation, Fungal ; Nucleic Acid Conformation ; RNA Processing, Post-Transcriptional ; RNA, Fungal ; RNA, Ribosomal, 5.8S/chemistry ; Saccharomyces cerevisiae/genetics ; Saccharomyces cerevisiae/metabolism ; Saccharomyces cerevisiae Proteins/genetics ; Saccharomyces cerevisiae Proteins/metabolism ; Sequence Deletion
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Identification of Lung and Blood Microbiota Implicated in COVID-19 Prognosis.
Autorzy:
Dereschuk K; Division of Otolaryngology-Head and Neck Surgery, Department of Surgery, University of California, San Diego, CA 92093, USA.; Research Service, VA San Diego Healthcare System, San Diego, CA 92161, USA.
Apostol L; Division of Otolaryngology-Head and Neck Surgery, Department of Surgery, University of California, San Diego, CA 92093, USA.; Research Service, VA San Diego Healthcare System, San Diego, CA 92161, USA.
Ranjan I; Division of Otolaryngology-Head and Neck Surgery, Department of Surgery, University of California, San Diego, CA 92093, USA.; Research Service, VA San Diego Healthcare System, San Diego, CA 92161, USA.
Chakladar J; Division of Otolaryngology-Head and Neck Surgery, Department of Surgery, University of California, San Diego, CA 92093, USA.; Research Service, VA San Diego Healthcare System, San Diego, CA 92161, USA.
Li WT; Division of Otolaryngology-Head and Neck Surgery, Department of Surgery, University of California, San Diego, CA 92093, USA.; Research Service, VA San Diego Healthcare System, San Diego, CA 92161, USA.
Rajasekaran M; Department of Urology, University of California San Diego, La Jolla, CA 92093, USA.; Urology Service, VA San Diego Healthcare System, San Diego, CA 92161, USA.
Chang EY; Department of Radiology, University of California, San Diego, CA 92093, USA.; Radiology Service, VA San Diego Healthcare System, San Diego, CA 92161, USA.
Ongkeko WM; Division of Otolaryngology-Head and Neck Surgery, Department of Surgery, University of California, San Diego, CA 92093, USA.; Research Service, VA San Diego Healthcare System, San Diego, CA 92161, USA.
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Źródło:
Cells [Cells] 2021 Jun 10; Vol. 10 (6). Date of Electronic Publication: 2021 Jun 10.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
COVID-19/*diagnosis
Leukocytes, Mononuclear/*microbiology
Lung/*microbiology
Microbiota/*physiology
Bronchoalveolar Lavage Fluid/microbiology ; Bronchoalveolar Lavage Fluid/virology ; COVID-19/immunology ; COVID-19/microbiology ; COVID-19/virology ; Case-Control Studies ; Humans ; Leukocytes, Mononuclear/virology ; Liquid Biopsy ; Lung/pathology ; Lung/virology ; Microbiota/genetics ; Microbiota/immunology ; Prognosis ; RNA, Bacterial/analysis ; RNA, Fungal/analysis ; RNA-Seq ; SARS-CoV-2/physiology
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
First record of a new microsporidium pathogenic to Gonipterus platensis in Brazil.
Autorzy:
Jordan C; School of Agricultural Sciences, São Paulo State University (UNESP), Campus of Botucatu, Av. Universitária, 3780, Altos do Paraíso, Fazenda Experimental Lageado, Botucatu, SP, 18610-034, Brazil. .
de Carvalho VR; School of Agricultural Sciences, São Paulo State University (UNESP), Campus of Botucatu, Av. Universitária, 3780, Altos do Paraíso, Fazenda Experimental Lageado, Botucatu, SP, 18610-034, Brazil.
Mascarin GM; Laboratory of Environmental Microbiology, Brazilian Agricultural Research Corporation, Embrapa Environment, Rodovia SP-340, km 127.5, Jaguariúna, SP, 13918-110, Brazil. .
Dos Santos Oliveira LR; Botucatu Medical School, Dept. Internal Medicine, Sao Paulo State University (UNESP), Campus of Botucatu, Av. Prof. Mário Rubens Guimarães Montenegro, s/n, Botucatu, SP, 18618-687, Brazil.
Dunlap CA; USDA, Agricultural Research Service, National Center for Agricultural Utilization Research, Crop Bioprotection Research Unit, 1815, N. University St, Peoria, IL, 61604, USA.
Wilcken CF; School of Agricultural Sciences, São Paulo State University (UNESP), Campus of Botucatu, Av. Universitária, 3780, Altos do Paraíso, Fazenda Experimental Lageado, Botucatu, SP, 18610-034, Brazil.
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Źródło:
Scientific reports [Sci Rep] 2021 May 26; Vol. 11 (1), pp. 10971. Date of Electronic Publication: 2021 May 26.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Coleoptera/*microbiology
Microsporidia, Unclassified/*isolation & purification
Animals ; Brazil ; Eucalyptus ; Hemolymph/microbiology ; Microsporidia, Unclassified/classification ; Microsporidia, Unclassified/genetics ; Microsporidia, Unclassified/pathogenicity ; Phylogeny ; RNA, Fungal/genetics ; RNA, Ribosomal/genetics ; Species Specificity
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Strain improvement of Trichoderma spp. through two-step protoplast fusion for cellulase production enhancement.
Autorzy:
Papzan Z; Department of Biotechnology, Faculty of Agricultural Sciences and Engineering, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran.; Department of Genetics, Faculty of Biology, University of Seville, Seville 41012, Spain.
Kowsari M; Microbial Biotechnology Department, Agricultural Biotechnology Research Institute of Iran (ABRII), Agricultural Research, Education and Extension Organization (AREEO), Shahid Fahmideh Boulevard, P.O. Box 31535-1897, Karaj, Iran.
Javan-Nikkhah M; Department of Plant Pathology, Faculty of Agricultural Sciences and Engineering, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran.
Gohari AM; Department of Plant Pathology, Faculty of Agricultural Sciences and Engineering, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran.
Limón MC; Department of Genetics, Faculty of Biology, University of Seville, Seville 41012, Spain.
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Źródło:
Canadian journal of microbiology [Can J Microbiol] 2021 May; Vol. 67 (5), pp. 406-414. Date of Electronic Publication: 2020 Nov 23.
Typ publikacji:
Journal Article
MeSH Terms:
Cellulase/*biosynthesis
Hypocreales/*enzymology
Protoplasts/*metabolism
Trichoderma/*enzymology
Trichoderma/*genetics
Amplified Fragment Length Polymorphism Analysis ; Cellulose/metabolism ; Gene Expression Regulation, Fungal ; Hypocrea/enzymology ; Hypocrea/genetics ; Hypocreales/genetics ; Industrial Microbiology ; Polymorphism, Genetic ; RNA, Fungal/genetics ; RNA, Messenger/genetics
SCR Organism:
Trichoderma harzianum; Trichoderma reesei
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Ribosome-associated Asc1/RACK1 is required for endonucleolytic cleavage induced by stalled ribosome at the 3' end of nonstop mRNA.
Autorzy:
Ikeuchi K; Graduate School of Pharmaceutical Science, Tohoku University, Aoba-ku, Sendai 980-8578, Japan.
Inada T; Graduate School of Pharmaceutical Science, Tohoku University, Aoba-ku, Sendai 980-8578, Japan.
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Źródło:
Scientific reports [Sci Rep] 2016 Jun 17; Vol. 6, pp. 28234. Date of Electronic Publication: 2016 Jun 17.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
3' Untranslated Regions*
RNA Stability*
Adaptor Proteins, Signal Transducing/*metabolism
GTP-Binding Proteins/*metabolism
RNA, Fungal/*metabolism
Ribosomes/*metabolism
Saccharomyces cerevisiae/*metabolism
Saccharomyces cerevisiae Proteins/*metabolism
Adaptor Proteins, Signal Transducing/genetics ; Cell Cycle Proteins/genetics ; Cell Cycle Proteins/metabolism ; Endoribonucleases/genetics ; Endoribonucleases/metabolism ; GTP-Binding Proteins/genetics ; Mutation ; RNA, Fungal/genetics ; RNA, Transfer, Amino Acyl/genetics ; RNA, Transfer, Amino Acyl/metabolism ; Ribosomes/genetics ; Saccharomyces cerevisiae/genetics ; Saccharomyces cerevisiae Proteins/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Trimethylguanosine synthase 1 (Tgs1) is involved in Swi6/HP1-independent siRNA production and establishment of heterochromatin in fission yeast.
Autorzy:
Yu H; Laboratory of Bioorganic Chemistry, Graduate school of Chemical Sciences and Engineering, Hokkaido University, Sapporo, Japan.; Ambitious Leader's Program Fostering Future Leaders to Open New Frontiers in Materials Science (ALP), Hokkaido University, Sapporo, Hokkaido, Japan.
Tsuchida M; Laboratory for Cell Regulation, Graduate School of Biostudies, Kyoto University, Kyoto, Japan.
Ando M; Laboratory of Bioorganic Chemistry, Graduate school of Chemical Sciences and Engineering, Hokkaido University, Sapporo, Japan.
Hashizaki T; Laboratory of Bioorganic Chemistry, Graduate school of Chemical Sciences and Engineering, Hokkaido University, Sapporo, Japan.
Shimada A; Laboratory for Cell Regulation, Graduate School of Biostudies, Kyoto University, Kyoto, Japan.
Takahata S; Laboratory of Bioorganic Chemistry, Graduate school of Chemical Sciences and Engineering, Hokkaido University, Sapporo, Japan.; Laboratory of Bioorganic Chemistry, Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo, Japan.
Murakami Y; Laboratory of Bioorganic Chemistry, Graduate school of Chemical Sciences and Engineering, Hokkaido University, Sapporo, Japan.; Laboratory of Bioorganic Chemistry, Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo, Japan.
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Źródło:
Genes to cells : devoted to molecular & cellular mechanisms [Genes Cells] 2021 Apr; Vol. 26 (4), pp. 203-218. Date of Electronic Publication: 2021 Mar 30.
Typ publikacji:
Journal Article
MeSH Terms:
Chromosomal Proteins, Non-Histone/*metabolism
Heterochromatin/*metabolism
RNA, Small Interfering/*metabolism
Schizosaccharomyces/*metabolism
Schizosaccharomyces pombe Proteins/*metabolism
tRNA Methyltransferases/*metabolism
Centromere/metabolism ; Gene Silencing ; Introns/genetics ; Models, Biological ; Protein Domains ; RNA Splicing/genetics ; RNA, Antisense/metabolism ; RNA, Fungal/genetics ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Schizosaccharomyces pombe Proteins/chemistry ; tRNA Methyltransferases/chemistry
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Diversity of fungal isolates from fungus-growing termite Macrotermes barneyi and characterization of bioactive compound from Xylaria escharoidea.
Autorzy:
Nagam V; State Key Laboratory of Microbial Technology, Microbial technology institute, Shandong University, 72 Binhai Road, Qingdao, Shandong, China.
Aluru R; Department of Organic and Biomolecular Chemistry, Ural Federal University, 19 Mira, Yekaterinburg, Russian Federation.
Shoaib M; State Key Laboratory of Microbial Technology, Microbial technology institute, Shandong University, 72 Binhai Road, Qingdao, Shandong, China.
Dong GR; State Key Laboratory of Microbial Technology, Microbial technology institute, Shandong University, 72 Binhai Road, Qingdao, Shandong, China.
Li Z; State Key Laboratory of Microbial Technology, Microbial technology institute, Shandong University, 72 Binhai Road, Qingdao, Shandong, China.
Pallaval VB; Department of Biotechnology, Krishna University, Machilipatnam, Andhra Pradesh, India.
Ni JF; State Key Laboratory of Microbial Technology, Microbial technology institute, Shandong University, 72 Binhai Road, Qingdao, Shandong, China.
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Źródło:
Insect science [Insect Sci] 2021 Apr; Vol. 28 (2), pp. 392-402. Date of Electronic Publication: 2020 Jul 22.
Typ publikacji:
Journal Article
MeSH Terms:
Anti-Infective Agents/*isolation & purification
Ascomycota/*chemistry
Fungi/*isolation & purification
Isoptera/*microbiology
Naphthalenes/*isolation & purification
RNA, Ribosomal, 18S/*analysis
Animals ; Anti-Infective Agents/chemistry ; Fungi/classification ; Fungi/physiology ; Naphthalenes/chemistry ; RNA, Fungal/analysis ; Sequence Analysis, DNA ; Symbiosis
SCR Organism:
Xylaria escharoidea
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
The molecular phylogeny of Chionaster nivalis reveals a novel order of psychrophilic and globally distributed Tremellomycetes (Fungi, Basidiomycota).
Autorzy:
Irwin NAT; Department of Botany, University of British Columbia, Vancouver, British Columbia, Canada.; Merton College, University of Oxford, Oxford, United Kingdom.
Twynstra CS; Department of Botany, University of British Columbia, Vancouver, British Columbia, Canada.
Mathur V; Department of Botany, University of British Columbia, Vancouver, British Columbia, Canada.
Keeling PJ; Department of Botany, University of British Columbia, Vancouver, British Columbia, Canada.
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Źródło:
PloS one [PLoS One] 2021 Mar 24; Vol. 16 (3), pp. e0247594. Date of Electronic Publication: 2021 Mar 24 (Print Publication: 2021).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Ecosystem*
Genes, Fungal*
Basidiomycota/*classification
Basidiomycota/*genetics
RNA, Fungal/*genetics
RNA, Ribosomal/*genetics
Arctic Regions ; Base Sequence ; Mycological Typing Techniques/methods ; Phylogeny ; Snow/microbiology ; rRNA Operon
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Vm-milR37 contributes to pathogenicity by regulating glutathione peroxidase gene VmGP in Valsa mali.
Autorzy:
Feng H; State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Yangling, China.
Xu M; State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Yangling, China.; State Key Laboratory of Crop Stress Biology for Arid Areas and College of Life Sciences, Northwest A&F University, Yangling, China.
Gao Y; State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Yangling, China.
Liang J; State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Yangling, China.
Guo F; State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Yangling, China.
Guo Y; State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Yangling, China.
Huang L; State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Yangling, China.
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Źródło:
Molecular plant pathology [Mol Plant Pathol] 2021 Feb; Vol. 22 (2), pp. 243-254. Date of Electronic Publication: 2020 Dec 05.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Gene Expression Regulation, Fungal*
Ascomycota/*pathogenicity
Glutathione Peroxidase/*genetics
MicroRNAs/*physiology
RNA, Fungal/*physiology
Ascomycota/genetics ; Malus/microbiology ; Oxidative Stress
SCR Organism:
Valsa mali
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Comparative transcriptome analysis reveals candidate genes related to cadmium accumulation and tolerance in two almond mushroom (Agaricus brasiliensis) strains with contrasting cadmium tolerance.
Autorzy:
Liu PH; Institute of Plant Nutritional Physiology and Molecular Biology, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.; National Engineering Research Center of JUNCAO Technology, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
Huang ZX; National Engineering Research Center of JUNCAO Technology, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
Luo XH; Fujian Key Laboratory of Agricultural Ecological Process in Red Soil Hilly Region, Agricultural Ecology Institute, Fujian Academy of Agricultural Sciences, Fuzhou, Fujian, China.
Chen H; Fujian Key Laboratory of Agricultural Ecological Process in Red Soil Hilly Region, Agricultural Ecology Institute, Fujian Academy of Agricultural Sciences, Fuzhou, Fujian, China.
Weng BQ; Fujian Key Laboratory of Agricultural Ecological Process in Red Soil Hilly Region, Agricultural Ecology Institute, Fujian Academy of Agricultural Sciences, Fuzhou, Fujian, China.
Wang YX; Fujian Key Laboratory of Agricultural Ecological Process in Red Soil Hilly Region, Agricultural Ecology Institute, Fujian Academy of Agricultural Sciences, Fuzhou, Fujian, China.
Chen LS; Institute of Plant Nutritional Physiology and Molecular Biology, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
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Źródło:
PloS one [PLoS One] 2020 Sep 29; Vol. 15 (9), pp. e0239617. Date of Electronic Publication: 2020 Sep 29 (Print Publication: 2020).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Transcriptome*
Agaricus/*metabolism
Cadmium/*metabolism
ATP-Binding Cassette Transporters/genetics ; ATP-Binding Cassette Transporters/metabolism ; Agaricus/drug effects ; Agaricus/genetics ; Cadmium/toxicity ; DNA Repair/drug effects ; DNA Replication/drug effects ; Drug Tolerance ; Fungal Proteins/genetics ; Fungal Proteins/metabolism ; Gene Expression Profiling ; Gene Expression Regulation, Fungal ; Glutathione Transferase/genetics ; Glutathione Transferase/metabolism ; Mycelium/chemistry ; Mycelium/drug effects ; Mycelium/growth & development ; Polysaccharides/metabolism ; RNA, Fungal/chemistry ; RNA, Fungal/metabolism ; RNA-Seq
SCR Organism:
Agaricus brasiliensis
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Ribosomal protein S7 ubiquitination during ER stress in yeast is associated with selective mRNA translation and stress outcome.
Autorzy:
Matsuki Y; Graduate School of Pharmaceutical Sciences, Tohoku University, Sendai, 980-8578, Japan.
Matsuo Y; Graduate School of Pharmaceutical Sciences, Tohoku University, Sendai, 980-8578, Japan.
Nakano Y; Graduate School of Pharmaceutical Sciences, Tohoku University, Sendai, 980-8578, Japan.
Iwasaki S; Department of Molecular and Cell Biology, University of California, Berkeley, CA94720, USA.; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba, 277-8561, Japan.; RNA Systems Biochemistry Laboratory, RIKEN Cluster for Pioneering Research, Wako, Saitama, 351-0198, Japan.
Yoko H; Graduate School of Pharmaceutical Sciences, Tohoku University, Sendai, 980-8578, Japan.
Udagawa T; Graduate School of Pharmaceutical Sciences, Tohoku University, Sendai, 980-8578, Japan.
Li S; Graduate School of Pharmaceutical Sciences, Tohoku University, Sendai, 980-8578, Japan.
Saeki Y; Laboratory of Protein Metabolism, Tokyo Metropolitan Institute of Medical Science, Setagaya-ku, Tokyo, 156-8506, Japan.
Yoshihisa T; Graduate School of Life Science, University of Hyogo, Hyogo, 678-1297, Japan.
Tanaka K; Laboratory of Protein Metabolism, Tokyo Metropolitan Institute of Medical Science, Setagaya-ku, Tokyo, 156-8506, Japan.
Ingolia NT; Department of Molecular and Cell Biology, University of California, Berkeley, CA94720, USA.
Inada T; Graduate School of Pharmaceutical Sciences, Tohoku University, Sendai, 980-8578, Japan. .
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Źródło:
Scientific reports [Sci Rep] 2020 Nov 12; Vol. 10 (1), pp. 19669. Date of Electronic Publication: 2020 Nov 12.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Endoplasmic Reticulum Stress*
RNA, Fungal/*metabolism
RNA, Messenger/*metabolism
Ribosomal Proteins/*metabolism
Ribosomes/*metabolism
Saccharomyces cerevisiae/*metabolism
Saccharomyces cerevisiae Proteins/*metabolism
Basic-Leucine Zipper Transcription Factors/genetics ; Basic-Leucine Zipper Transcription Factors/metabolism ; Endopeptidases/metabolism ; Gene Expression Regulation, Fungal ; Hydrolases/genetics ; Hydrolases/metabolism ; Protein Biosynthesis ; Repressor Proteins/genetics ; Repressor Proteins/metabolism ; Saccharomyces cerevisiae Proteins/genetics ; Ubiquitin-Protein Ligases/metabolism ; Ubiquitination ; Unfolded Protein Response
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Transcriptome analysis of genes involved in defence response in Polyporus umbellatus with Armillaria mellea infection.
Autorzy:
Liu MM; Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences &Peking Union Medical College, Beijing 100193, P. R. China.
Xing YM; Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences &Peking Union Medical College, Beijing 100193, P. R. China.
Zhang DW; Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences &Peking Union Medical College, Beijing 100193, P. R. China.
Guo SX; Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences &Peking Union Medical College, Beijing 100193, P. R. China.
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Źródło:
Scientific reports [Sci Rep] 2015 Nov 03; Vol. 5, pp. 16075. Date of Electronic Publication: 2015 Nov 03.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Transcriptome*
Armillaria/*genetics
Polyporus/*genetics
RNA, Fungal/*metabolism
Armillaria/metabolism ; Cell Wall/metabolism ; Databases, Genetic ; Gene Expression Profiling ; High-Throughput Nucleotide Sequencing ; Molecular Chaperones/genetics ; Molecular Chaperones/metabolism ; Plant Roots/microbiology ; Plants/microbiology ; Polyporus/metabolism ; RNA, Fungal/chemistry ; Real-Time Polymerase Chain Reaction ; Sequence Analysis, RNA
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Strand-Specific RNA-Seq Analyses of Fruiting Body Development in Coprinopsis cinerea.
Autorzy:
Muraguchi H; Department of Biotechnology, Faculty of Bioresource Sciences, Akita Prefectural University, Akita, 010-0195, Japan.
Umezawa K; Department of Environmental and Natural Resource Science, Faculty of Agriculture, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Niikura M; Department of Environmental and Natural Resource Science, Faculty of Agriculture, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Yoshida M; Department of Environmental and Natural Resource Science, Faculty of Agriculture, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Kozaki T; Department of Applied Biological Science, Faculty of Agriculture, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Ishii K; Department of Applied Biological Science, Faculty of Agriculture, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Sakai K; Department of Applied Biological Chemistry, Faculty of Agriculture, Meijo University, Nagoya, Aichi, 468-0073, Japan.
Shimizu M; Department of Applied Biological Chemistry, Faculty of Agriculture, Meijo University, Nagoya, Aichi, 468-0073, Japan.
Nakahori K; Graduate School of Natural Science and Technology, Okayama University, Okayama, 700-8530, Japan.
Sakamoto Y; Iwate Biotechnology Research Center, Kitakami, Iwate, 024-0003, Japan.
Choi C; US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA, 94598, United States of America.
Ngan CY; US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA, 94598, United States of America.
Lindquist E; US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA, 94598, United States of America.
Lipzen A; US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA, 94598, United States of America.
Tritt A; US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA, 94598, United States of America.
Haridas S; US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA, 94598, United States of America.
Barry K; US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA, 94598, United States of America.
Grigoriev IV; US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA, 94598, United States of America.
Pukkila PJ; Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599-3280, United States of America.
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Źródło:
PloS one [PLoS One] 2015 Oct 28; Vol. 10 (10), pp. e0141586. Date of Electronic Publication: 2015 Oct 28 (Print Publication: 2015).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
RNA, Fungal*
Sequence Analysis, RNA*
Basidiomycota/*genetics
Fruiting Bodies, Fungal/*genetics
Computational Biology/methods ; Gene Expression Profiling ; Gene Expression Regulation, Fungal ; Hyphae ; Models, Biological ; RNA, Antisense ; Reproducibility of Results ; Transcription Factors/genetics ; Transcriptome
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Small RNAs from the wheat stripe rust fungus (Puccinia striiformis f.sp. tritici).
Autorzy:
Mueth NA; Molecular Plant Sciences, Washington State University, Pullman, WA, USA. .
Ramachandran SR; Plant Pathology, Washington State University, Pullman, WA, USA. .
Hulbert SH; Molecular Plant Sciences, Washington State University, Pullman, WA, USA. scot_.; Plant Pathology, Washington State University, Pullman, WA, USA. scot_.
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Źródło:
BMC genomics [BMC Genomics] 2015 Sep 21; Vol. 16, pp. 718. Date of Electronic Publication: 2015 Sep 21.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
RNA, Fungal*
RNA, Small Interfering*
Basidiomycota/*genetics
Triticum/*microbiology
Chromosome Mapping ; Computational Biology/methods ; Gene Expression Regulation, Fungal ; Genetic Loci ; High-Throughput Nucleotide Sequencing ; Molecular Sequence Annotation ; Nucleic Acid Conformation ; Plant Diseases/microbiology ; RNA Interference ; RNA, Messenger/chemistry ; RNA, Messenger/genetics ; Sequence Analysis, RNA
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Discovery of Novel ncRNA Sequences in Multiple Genome Alignments on the Basis of Conserved and Stable Secondary Structures.
Autorzy:
Fu Y; Department of Biochemistry & Biophysics and Center for RNA Biology, University of Rochester Medical Center, Rochester, New York, United States of America.
Xu ZZ; Department of Biochemistry & Biophysics and Center for RNA Biology, University of Rochester Medical Center, Rochester, New York, United States of America.
Lu ZJ; MOE Key Lab of Bioinformatics, School of Life Sciences, Tsinghua University, Beijing, China.
Zhao S; Department of Biochemistry & Biophysics and Center for RNA Biology, University of Rochester Medical Center, Rochester, New York, United States of America.
Mathews DH; Department of Biochemistry & Biophysics and Center for RNA Biology, University of Rochester Medical Center, Rochester, New York, United States of America; Department of Biostatistics & Computational Biology, University of Rochester Medical Center, Rochester, New York, United States of America.
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Źródło:
PloS one [PLoS One] 2015 Jun 15; Vol. 10 (6), pp. e0130200. Date of Electronic Publication: 2015 Jun 15 (Print Publication: 2015).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:
Algorithms*
Genome, Bacterial*
Genome, Fungal*
Nucleic Acid Conformation*
RNA, Bacterial/*genetics
RNA, Fungal/*genetics
RNA, Untranslated/*genetics
Computational Biology/methods ; RNA, Bacterial/chemistry ; RNA, Fungal/chemistry ; Sequence Alignment/methods
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Wyświetlanie 41-60 z 1570

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