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Wyszukujesz frazę ""RNA, Viral"" wg kryterium: Temat


Tytuł:
Roles of RNA scaffolding in nanoscale Gag multimerization and selective protein sorting at HIV membranes.
Autorzy:
Ying Y; Department of Biomedical Engineering, College of Future Technology, Peking University, Beijing 100871, China.
Yang Y; Department of Biomedical Engineering, College of Future Technology, Peking University, Beijing 100871, China.
Chen AK; Department of Biomedical Engineering, College of Future Technology, Peking University, Beijing 100871, China.; National Biomedical Imaging Center, Peking University, Beijing 100871, China.
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Źródło:
Science advances [Sci Adv] 2024 Feb 23; Vol. 10 (8), pp. eadk8297. Date of Electronic Publication: 2024 Feb 23.
Typ publikacji:
Journal Article
MeSH Terms:
RNA, Viral*/genetics
RNA, Viral*/metabolism
HIV Infections*/metabolism
Humans ; Cell Membrane/metabolism ; Gene Products, gag/genetics ; Gene Products, gag/metabolism ; RNA, Messenger/metabolism ; Protein Multimerization
Czasopismo naukowe
Tytuł:
Hepatitis B virus RNAs co-opt ELAVL1 for stabilization and CRM1-dependent nuclear export.
Autorzy:
Zheng Y; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.; School of Life Sciences, Hubei University, Wuhan, China.
Wang M; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.
Yin J; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.
Duan Y; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.
Wu C; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.
Xu Z; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.
Bu Y; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.
Wang J; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.
Chen Q; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.
Zhu G; Department of Emergency, General Hospital of Central Theater Command of People's Liberation Army of China, Wuhan, China.
Zhao K; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.
Zhang L; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.
Hua R; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.
Xu Y; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.
Hu X; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.
Cheng X; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.; Department of Pathology, Zhongnan Hospital of Wuhan University, Wuhan, China.; Hubei Clinical Center and Key Laboratory of Intestinal and Colorectal Diseases, Wuhan, China.; Hubei Jiangxia Laboratory, Wuhan, China.
Xia Y; State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University, Wuhan, China.; Hubei Jiangxia Laboratory, Wuhan, China.; Pingyuan Laboratory, Henan, China.
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Źródło:
PLoS pathogens [PLoS Pathog] 2024 Feb 02; Vol. 20 (2), pp. e1011999. Date of Electronic Publication: 2024 Feb 02 (Print Publication: 2024).
Typ publikacji:
Journal Article
MeSH Terms:
Hepatitis B virus*/metabolism
RNA, Viral*/genetics
RNA, Viral*/metabolism
Animals ; Humans ; Active Transport, Cell Nucleus ; Drosophila/genetics ; Virus Replication/genetics ; Nuclear Proteins/metabolism ; RNA-Binding Proteins/genetics ; RNA-Binding Proteins/metabolism ; ELAV-Like Protein 1/genetics ; ELAV-Like Protein 1/metabolism
Czasopismo naukowe
Tytuł:
Targeting cap1 RNA methyltransferases as an antiviral strategy.
Autorzy:
Tsukamoto Y; Institute of Cardiovascular Immunology, Medical Faculty, University Hospital Bonn, University of Bonn, Bonn, Germany.
Igarashi M; Division of Global Epidemiology, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan; International Collaboration Unit, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Hokkaido, Japan.
Kato H; Institute of Cardiovascular Immunology, Medical Faculty, University Hospital Bonn, University of Bonn, Bonn, Germany. Electronic address: .
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Źródło:
Cell chemical biology [Cell Chem Biol] 2024 Jan 18; Vol. 31 (1), pp. 86-99. Date of Electronic Publication: 2023 Dec 12.
Typ publikacji:
Journal Article; Review; Research Support, Non-U.S. Gov't
MeSH Terms:
Antiviral Agents*/chemistry
Antiviral Agents*/pharmacology
Methyltransferases*/antagonists & inhibitors
RNA Caps*/genetics
RNA Caps*/metabolism
RNA, Viral*/genetics
RNA, Viral*/metabolism
Drug Design*
Methylation ; RNA, Messenger/metabolism ; Humans
Czasopismo naukowe
Tytuł:
Intermolecular base-pairing interactions, a unique topology and exoribonuclease-resistant noncoding RNAs drive formation of viral chimeric RNAs in plants.
Autorzy:
Nemes K; Department of Plant Biology, Linnean Center for Plant Biology, Swedish University of Agricultural Sciences (SLU), Uppsala, 75007, Sweden.
Gil JF; Department of Plant Biology, Linnean Center for Plant Biology, Swedish University of Agricultural Sciences (SLU), Uppsala, 75007, Sweden.; VEDAS Corporación de Investigación e Innovación (VEDAS CII), Medellín, 050024, Colombia.
Liebe S; Department of Phytopathology, Institute of Sugar Beet Research, Göttingen, 37079, Germany.
Mansi M; Department of Plant Biology, Linnean Center for Plant Biology, Swedish University of Agricultural Sciences (SLU), Uppsala, 75007, Sweden.
Poimenopoulou E; Department of Plant Biology, Linnean Center for Plant Biology, Swedish University of Agricultural Sciences (SLU), Uppsala, 75007, Sweden.
Lennefors BL; Department of Plant Pathology, DLF Beet Seed AB, Landskrona, 261 91, Sweden.
Varrelmann M; Department of Phytopathology, Institute of Sugar Beet Research, Göttingen, 37079, Germany.
Savenkov EI; Department of Plant Biology, Linnean Center for Plant Biology, Swedish University of Agricultural Sciences (SLU), Uppsala, 75007, Sweden.
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Źródło:
The New phytologist [New Phytol] 2024 Jan; Vol. 241 (2), pp. 861-877. Date of Electronic Publication: 2023 Oct 28.
Typ publikacji:
Journal Article
MeSH Terms:
RNA, Viral*/genetics
RNA, Viral*/metabolism
Exoribonucleases*/genetics
Exoribonucleases*/metabolism
RNA, Untranslated/genetics
Czasopismo naukowe
Tytuł:
The minus strand of positive-sense RNA viruses encodes small proteins.
Autorzy:
Cheng X; College of Plant Protection/Key Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region of Chinese Education Ministry, Northeast Agricultural University, 150030 Harbin, Heilongjiang, China. Electronic address: .
Wu X; College of Plant Protection/Key Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region of Chinese Education Ministry, Northeast Agricultural University, 150030 Harbin, Heilongjiang, China.
Fang R; State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China; CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing 100049, China. Electronic address: .
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Źródło:
Trends in microbiology [Trends Microbiol] 2024 Jan; Vol. 32 (1), pp. 6-7. Date of Electronic Publication: 2023 Nov 10.
Typ publikacji:
Journal Article
MeSH Terms:
RNA, Viral*/genetics
RNA, Viral*/metabolism
RNA Viruses*/genetics
RNA Viruses*/metabolism
Virus Replication ; Positive-Strand RNA Viruses/genetics ; Positive-Strand RNA Viruses/metabolism
Czasopismo naukowe
Tytuł:
Context-dependent accuracy of the cobas plasma separation card for HCV RNA viral load measurement.
Autorzy:
Qureshi H; Doctor's Plaza, Clifton, Karachi, Pakistan.
Duran AC; Roche Diagnostics International AG, Rotkreuz, Switzerland.
Mahmood H; Planning, Development and Monitoring Unit, Ministry of Health, Islamabad, Pakistan.
Sarwar Z; Hepatitis Elimination, Punjab, Lahore, Pakistan.
Mahmood K; Hepatitis & Infection Control Program, Punjab, Lahore, Pakistan.
Midde K; Roche Molecular Systems, Inc., Pleasanton, California, USA.
Canchola JA; Roche Molecular Systems, Inc., Pleasanton, California, USA.
Parkin NT; Data First Consulting, Sebastopol, California, USA.
La Brot B; Roche Molecular Systems, Inc., Pleasanton, California, USA.
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Źródło:
Journal of viral hepatitis [J Viral Hepat] 2024 Mar; Vol. 31 (3), pp. 156-160. Date of Electronic Publication: 2024 Jan 02.
Typ publikacji:
Journal Article
MeSH Terms:
RNA, Viral*
Hepatitis C*/diagnosis
Humans ; Viral Load/methods ; Hepacivirus/genetics ; Plasma ; Sensitivity and Specificity
Czasopismo naukowe
Tytuł:
Genetic Algorithm-Based Receptor Ligand: A Genetic Algorithm-Guided Generative Model to Boost the Novelty and Drug-Likeness of Molecules in a Sampling Chemical Space.
Autorzy:
Wang M; College of Pharmaceutical Sciences and Cancer Center, Zhejiang University, Hangzhou 310058, Zhejiang ,China.; CarbonSilicon AI Technology Co., Ltd., Hangzhou 310018, Zhejiang ,China.
Wu Z; College of Pharmaceutical Sciences and Cancer Center, Zhejiang University, Hangzhou 310058, Zhejiang ,China.; School of Computer Science, Wuhan University, Wuhan 430072, Hubei ,China.
Wang J; College of Pharmaceutical Sciences and Cancer Center, Zhejiang University, Hangzhou 310058, Zhejiang ,China.; CarbonSilicon AI Technology Co., Ltd., Hangzhou 310018, Zhejiang ,China.
Weng G; College of Pharmaceutical Sciences and Cancer Center, Zhejiang University, Hangzhou 310058, Zhejiang ,China.
Kang Y; College of Pharmaceutical Sciences and Cancer Center, Zhejiang University, Hangzhou 310058, Zhejiang ,China.
Pan P; College of Pharmaceutical Sciences and Cancer Center, Zhejiang University, Hangzhou 310058, Zhejiang ,China.
Li D; College of Pharmaceutical Sciences and Cancer Center, Zhejiang University, Hangzhou 310058, Zhejiang ,China.
Deng Y; CarbonSilicon AI Technology Co., Ltd., Hangzhou 310018, Zhejiang ,China.
Yao X; Dr. Neher's Biophysics Laboratory for Innovative Drug Discovery Macau Institute for Applied Research in Medicine and Health State Key Laboratory of Quality Research in Chinese Medicine, Macau University of Science and Technology, Taipa, Macau 999078, China.
Bing Z; Institute of Modern Physics, Chinese Academy of Sciences, Lanzhou, Gansu 730000, China.
Hsieh CY; College of Pharmaceutical Sciences and Cancer Center, Zhejiang University, Hangzhou 310058, Zhejiang ,China.
Hou T; College of Pharmaceutical Sciences and Cancer Center, Zhejiang University, Hangzhou 310058, Zhejiang ,China.
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Źródło:
Journal of chemical information and modeling [J Chem Inf Model] 2024 Feb 26; Vol. 64 (4), pp. 1213-1228. Date of Electronic Publication: 2024 Feb 01.
Typ publikacji:
Journal Article
MeSH Terms:
Drug Design*
RNA, Viral*
Ligands ; Algorithms ; Drug Discovery
Czasopismo naukowe
Tytuł:
Inosine-Induced Base Pairing Diversity during Reverse Transcription.
Autorzy:
Zheng YY; Department of Chemistry, University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, United States.; The RNA Institute, University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, United States.
Reddy K; The RNA Institute, University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, United States.
Vangaveti S; The RNA Institute, University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, United States.
Sheng J; Department of Chemistry, University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, United States.; The RNA Institute, University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, United States.
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Źródło:
ACS chemical biology [ACS Chem Biol] 2024 Feb 16; Vol. 19 (2), pp. 348-356. Date of Electronic Publication: 2024 Jan 22.
Typ publikacji:
Journal Article
MeSH Terms:
Reverse Transcription*
RNA, Viral*/genetics
Base Pairing ; Inosine/analysis ; Inosine/chemistry ; Inosine/genetics ; Adenosine Deaminase/genetics
Czasopismo naukowe
Tytuł:
Internal RNA 2'-O-methylation on the HIV-1 genome impairs reverse transcription.
Autorzy:
Decombe A; Architecture et Fonction des Macromolécules Biologiques, Centre National de la Recherche Scientifique, Aix-Marseille Université, Marseille 13288, France.
Peersen O; Department of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO 80523, USA.
Sutto-Ortiz P; Architecture et Fonction des Macromolécules Biologiques, Centre National de la Recherche Scientifique, Aix-Marseille Université, Marseille 13288, France.
Chamontin C; Institut de Recherche en Infectiologie de Montpellier (IRIM), Centre National de la Recherche Scientifique, Université de Montpellier, Montpellier 34090, France.
Piorkowski G; Unité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207), 13005 Marseille, France.
Canard B; Architecture et Fonction des Macromolécules Biologiques, Centre National de la Recherche Scientifique, Aix-Marseille Université, Marseille 13288, France.
Nisole S; Institut de Recherche en Infectiologie de Montpellier (IRIM), Centre National de la Recherche Scientifique, Université de Montpellier, Montpellier 34090, France.
Decroly E; Architecture et Fonction des Macromolécules Biologiques, Centre National de la Recherche Scientifique, Aix-Marseille Université, Marseille 13288, France.
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Źródło:
Nucleic acids research [Nucleic Acids Res] 2024 Feb 09; Vol. 52 (3), pp. 1359-1373.
Typ publikacji:
Journal Article
MeSH Terms:
HIV Reverse Transcriptase*/genetics
HIV Reverse Transcriptase*/metabolism
HIV-1*/genetics
HIV-1*/metabolism
RNA, Viral*/metabolism
Virus Replication*
RNA Processing, Post-Transcriptional*
Humans ; Methylation ; Methyltransferases/genetics ; Methyltransferases/metabolism ; Nucleotides/metabolism ; Reverse Transcription
Czasopismo naukowe
Tytuł:
Cycle threshold values of SARS-CoV-2 RNA in conjunctival swabs and nasopharyngeal secretions: a comparative study from a tertiary care center in India.
Autorzy:
Bansal R; Advanced Eye Centre, Post Graduate Institute of Medical Education and Research, Chandigarh, 160012, India. .
Bora I; Department of Virology, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Kanta P; Department of Virology, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Singh MP; Department of Virology, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Angrup A; Department of Medical Microbiology, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Suri V; Department of Internal Medicine, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Mohindra R; Department of Internal Medicine, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Jaswal S; Department of Anesthesia and Intensive Care, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Meena SC; Department of Anesthesia and Intensive Care, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Bhalla A; Department of Internal Medicine, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Malhotra P; Department of Internal Medicine, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Gupta V; Advanced Eye Centre, Post Graduate Institute of Medical Education and Research, Chandigarh, 160012, India.
Ray P; Department of Medical Microbiology, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
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Źródło:
International ophthalmology [Int Ophthalmol] 2024 Feb 08; Vol. 44 (1), pp. 29. Date of Electronic Publication: 2024 Feb 08.
Typ publikacji:
Journal Article
MeSH Terms:
RNA, Viral*
COVID-19*/diagnosis
Humans ; SARS-CoV-2/genetics ; Tertiary Care Centers ; India/epidemiology
Czasopismo naukowe
Tytuł:
Identifying spatiotemporal trends of SARS-CoV-2 RNA in wastewater: from the perspective of upstream and downstream wastewater-based epidemiology (WBE).
Autorzy:
Tran DP; Department of Civil Engineering, Chung Yuan Christian University, Taoyuan City, 320, Taiwan, Republic of China.; Center for Environmental Risk Management, Chung Yuan Christian University, Taoyuan City, 320, Taiwan, Republic of China.
You BC; Center for Environmental Risk Management, Chung Yuan Christian University, Taoyuan City, 320, Taiwan, Republic of China.; Department of Environmental Engineering, Chung Yuan Christian University, Taoyuan City, 320, Taiwan, Republic of China.
Liu CW; Department of Water Resource, Taoyuan City Government, Taoyuan City, 320, Taiwan, Republic of China.
Chen YN; Department of Bioscience Technology, Chung Yuan Christian University, Taoyuan City, 320, Taiwan, Republic of China.
Wang YF; Center for Environmental Risk Management, Chung Yuan Christian University, Taoyuan City, 320, Taiwan, Republic of China.; Department of Environmental Engineering, Chung Yuan Christian University, Taoyuan City, 320, Taiwan, Republic of China.
Chung SN; Department of Water Resource, Taoyuan City Government, Taoyuan City, 320, Taiwan, Republic of China.
Lee JJ; Department of Water Resource, Taoyuan City Government, Taoyuan City, 320, Taiwan, Republic of China.
You SJ; Center for Environmental Risk Management, Chung Yuan Christian University, Taoyuan City, 320, Taiwan, Republic of China. .; Department of Environmental Engineering, Chung Yuan Christian University, Taoyuan City, 320, Taiwan, Republic of China. .
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Źródło:
Environmental science and pollution research international [Environ Sci Pollut Res Int] 2024 Feb; Vol. 31 (8), pp. 11576-11590. Date of Electronic Publication: 2024 Jan 14.
Typ publikacji:
Journal Article
MeSH Terms:
RNA, Viral*
COVID-19*/epidemiology
Humans ; Wastewater ; SARS-CoV-2 ; Wastewater-Based Epidemiological Monitoring
SCR Organism:
SARS-CoV-2 variants
Czasopismo naukowe
Tytuł:
Omicron variant (B.1.1.529) challenge the integrity of blood brain barrier: Evidence from protein structural analysis.
Autorzy:
Nasir A; Medical Research Center, Second Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Samad A; Department of Biochemistry, Abdul Wali Khan University Mardan, Pakistan.
Ullah S; Department of Biochemistry, Abdul Wali Khan University Mardan, Pakistan.
Ali A; Department of Bioinformatics and Biological Statistics, Shanghai Jiao Tong University, Shanghai, China.
Wei DQ; Department of Bioinformatics and Biological Statistics, Shanghai Jiao Tong University, Shanghai, China; Zhongjing Research and Industrialization Institute of Chinese Medicine, Zhongguancun Scientific Park, Meixi, Nayang, Henan, China. Electronic address: .
Qian B; Medical Research Center, Second Affiliated Hospital of Zhengzhou University, Zhengzhou, China. Electronic address: .
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Źródło:
Computers in biology and medicine [Comput Biol Med] 2024 Feb; Vol. 169, pp. 107906. Date of Electronic Publication: 2023 Dec 26.
Typ publikacji:
Journal Article
MeSH Terms:
Blood-Brain Barrier*
RNA, Viral*
Animals ; Mice ; Brain ; Molecular Dynamics Simulation ; SARS-CoV-2
Czasopismo naukowe
Tytuł:
Favipiravir Analogues as Inhibitors of SARS-CoV-2 RNA-Dependent RNA Polymerase, Combined Quantum Chemical Modeling, Quantitative Structure-Property Relationship, and Molecular Docking Study.
Autorzy:
Latosińska M; Faculty of Physics, Adam Mickiewicz University, Uniwersytetu Poznańskiego 2, 61-614 Poznań, Poland.
Latosińska JN; Faculty of Physics, Adam Mickiewicz University, Uniwersytetu Poznańskiego 2, 61-614 Poznań, Poland.
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Źródło:
Molecules (Basel, Switzerland) [Molecules] 2024 Jan 16; Vol. 29 (2). Date of Electronic Publication: 2024 Jan 16.
Typ publikacji:
Journal Article
MeSH Terms:
RNA, Viral*
COVID-19*
Amides*
Pyrazines*
Humans ; Molecular Docking Simulation ; SARS-CoV-2 ; RNA-Dependent RNA Polymerase
Czasopismo naukowe
Tytuł:
The UCSC Genome Browser database: 2024 update.
Autorzy:
Raney BJ; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Barber GP; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Benet-Pagès A; Institute of Neurogenomics, Helmholtz Zentrum München GmbH - German Research Center for Environmental Health, 85764 Neuherberg, Germany.; Medical Genetics Center (Medizinisch Genetisches Zentrum), Munich 80335, Germany.
Casper J; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Clawson H; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Cline MS; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Diekhans M; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Fischer C; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Navarro Gonzalez J; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Hickey G; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Hinrichs AS; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Kuhn RM; Robert Kuhn Consulting, Aptos,CA 95003, USA.
Lee BT; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Lee CM; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Le Mercier P; Swiss-Prot Group, SIB Swiss Institute of Bioinformatics, CMU, 1 Michel Servet, 1211 Geneva 4, Switzerland.
Miga KH; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Nassar LR; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Nejad P; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Paten B; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Perez G; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Schmelter D; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Speir ML; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Wick BD; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Zweig AS; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Haussler D; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Kent WJ; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Haeussler M; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
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Źródło:
Nucleic acids research [Nucleic Acids Res] 2024 Jan 05; Vol. 52 (D1), pp. D1082-D1088.
Typ publikacji:
Journal Article
MeSH Terms:
Databases, Genetic*
Genomics*
RNA, Viral*
Animals ; Humans ; Mice ; Genome, Human ; Genome, Viral ; Internet ; Molecular Sequence Annotation ; Software
Czasopismo naukowe
Tytuł:
AAACH is a conserved motif in a cis-acting replication element that is artificially inserted into Senecavirus A genome.
Autorzy:
Wang M; College of Veterinary Medicine, Qingdao Agricultural University, Qingdao, 266109, China.
Zhao D; College of Veterinary Medicine, Qingdao Agricultural University, Qingdao, 266109, China.
Li J; Market Supervision Administration of Huangdao District, Qingdao, 266500, China.
Zhu L; College of Veterinary Medicine, Qingdao Agricultural University, Qingdao, 266109, China.
Duan X; Qingdao Center for Animal Disease Control & Prevention, Qingdao, 266199, China.
Zhang Y; State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266237, China.
Li Y; Qingdao Center for Animal Disease Control & Prevention, Qingdao, 266199, China. Electronic address: .
Liu F; College of Veterinary Medicine, Qingdao Agricultural University, Qingdao, 266109, China. Electronic address: .
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Źródło:
Virus research [Virus Res] 2024 Jan 02; Vol. 339, pp. 199269. Date of Electronic Publication: 2023 Nov 19.
Typ publikacji:
Journal Article
MeSH Terms:
RNA, Viral*/genetics
Picornaviridae*/genetics
Humans ; Base Sequence ; DNA, Complementary ; HeLa Cells ; Nucleic Acid Conformation ; Virus Replication/genetics
SCR Organism:
Senecavirus A
Czasopismo naukowe
Tytuł:
An RNA excited conformational state at atomic resolution.
Autorzy:
Geng A; Department of Biochemistry, Duke University School of Medicine, Durham, NC, 27710, USA.
Ganser L; Department of Biochemistry, Duke University School of Medicine, Durham, NC, 27710, USA.; Department of Biophysics, Johns Hopkins University, Baltimore, MD, 21218, USA.
Roy R; Center for Genomic and Computational Biology, Duke University School of Medicine, Durham, NC, 27710, USA.
Shi H; Department of Chemistry, Duke University, Durham, NC, 27708, USA.; Innovative Genomics Institute, University of California, Berkeley, CA, 94720, USA.
Pratihar S; Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY, 10032, USA.
Case DA; Department of Chemistry and Chemical Biology, Rutgers University, Piscataway, NJ, 08854, USA.
Al-Hashimi HM; Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY, 10032, USA. .
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Źródło:
Nature communications [Nat Commun] 2023 Dec 19; Vol. 14 (1), pp. 8432. Date of Electronic Publication: 2023 Dec 19.
Typ publikacji:
Journal Article
MeSH Terms:
RNA, Viral*/genetics
RNA, Viral*/chemistry
Nucleic Acid Conformation ; Magnetic Resonance Spectroscopy ; Mutagenesis
Czasopismo naukowe
Tytuł:
Bacterial cGAS senses a viral RNA to initiate immunity.
Autorzy:
Banh DV; Laboratory of Bacteriology, The Rockefeller University, New York, NY, USA.; Weill Cornell/Rockefeller/Sloan Kettering Tri-Institutional MD-PhD Program, New York, NY, USA.
Roberts CG; Laboratory of Bacteriology, The Rockefeller University, New York, NY, USA.
Morales-Amador A; Laboratory of Genetically Encoded Small Molecules, The Rockefeller University, New York, NY, USA.
Berryhill BA; Department of Biology, Emory University, Atlanta, GA, USA.
Chaudhry W; Department of Biology, Emory University, Atlanta, GA, USA.
Levin BR; Department of Biology, Emory University, Atlanta, GA, USA.
Brady SF; Laboratory of Genetically Encoded Small Molecules, The Rockefeller University, New York, NY, USA.
Marraffini LA; Laboratory of Bacteriology, The Rockefeller University, New York, NY, USA. .; Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA. .
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Źródło:
Nature [Nature] 2023 Nov; Vol. 623 (7989), pp. 1001-1008. Date of Electronic Publication: 2023 Nov 15.
Typ publikacji:
Journal Article
MeSH Terms:
Bacteria*/enzymology
Bacteria*/immunology
Nucleotidyltransferases*/metabolism
RNA, Viral*/immunology
RNA, Viral*/metabolism
Staphylococcus Phages*/genetics
Staphylococcus Phages*/immunology
Animals ; 2',5'-Oligoadenylate Synthetase/metabolism ; Evolution, Molecular ; Immunity, Innate ; Oligonucleotides/immunology ; Oligonucleotides/metabolism ; Signal Transduction/immunology
Czasopismo naukowe
Tytuł:
Single-shot multi-channel plasmonic real-time polymerase chain reaction for multi-target point-of-care testing.
Autorzy:
Kang BH; Department of Bio and Brain Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea. .; KAIST Institute for Health Science and Technology (KIHST), Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.
Jang KW; Department of Bio and Brain Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea. .; KAIST Institute for Health Science and Technology (KIHST), Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.
Yu ES; Department of Bio and Brain Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea. .; KAIST Institute for Health Science and Technology (KIHST), Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.
Jeong H; Department of Bio and Brain Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea. .; KAIST Institute for Health Science and Technology (KIHST), Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.
Jeong KH; Department of Bio and Brain Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea. .; KAIST Institute for Health Science and Technology (KIHST), Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.
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Źródło:
Lab on a chip [Lab Chip] 2023 Oct 24; Vol. 23 (21), pp. 4701-4707. Date of Electronic Publication: 2023 Oct 24.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
RNA, Viral*/genetics
RNA, Viral*/analysis
Point-of-Care Testing*
Humans ; Real-Time Polymerase Chain Reaction ; Reverse Transcription ; Point-of-Care Systems ; Nucleic Acid Amplification Techniques/methods ; Sensitivity and Specificity
Czasopismo naukowe
Tytuł:
Cont-ID: detection of sample cross-contamination in viral metagenomic data.
Autorzy:
Rollin J; Plant Pathology Laboratory, Gembloux Agro-Bio Tech, University of Liège, 5030, Gembloux, Belgium.; DNAVision, 6041, Gosselies, Belgium.
Rong W; Plant Pathology Laboratory, Gembloux Agro-Bio Tech, University of Liège, 5030, Gembloux, Belgium.
Massart S; Plant Pathology Laboratory, Gembloux Agro-Bio Tech, University of Liège, 5030, Gembloux, Belgium. .
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Źródło:
BMC biology [BMC Biol] 2023 Oct 13; Vol. 21 (1), pp. 217. Date of Electronic Publication: 2023 Oct 13.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
RNA, Viral*/analysis
RNA, Viral*/genetics
Viruses*/genetics
Humans ; Reproducibility of Results ; Metagenomics/methods ; Computational Biology ; High-Throughput Nucleotide Sequencing/methods
Czasopismo naukowe
Tytuł:
Multiple thermocycles followed by LAMP with only two primers for ultrasensitive colorimetric viral RNA testing and tracking at single-base resolution.
Autorzy:
Zhang P; Beijing Key Laboratory for Bioengineering and Sensing Technology, School of Chemistry and Biological Engineering, University of Science and Technology Beijing, 30 Xueyuan Road, Haidian District, Beijing, 100083, China.
Qin K; Beijing Key Laboratory for Bioengineering and Sensing Technology, School of Chemistry and Biological Engineering, University of Science and Technology Beijing, 30 Xueyuan Road, Haidian District, Beijing, 100083, China.
Gao K; Beijing Key Laboratory for Bioengineering and Sensing Technology, School of Chemistry and Biological Engineering, University of Science and Technology Beijing, 30 Xueyuan Road, Haidian District, Beijing, 100083, China.
Su F; Beijing Key Laboratory for Bioengineering and Sensing Technology, School of Chemistry and Biological Engineering, University of Science and Technology Beijing, 30 Xueyuan Road, Haidian District, Beijing, 100083, China.
Wang H; Beijing Key Laboratory for Bioengineering and Sensing Technology, School of Chemistry and Biological Engineering, University of Science and Technology Beijing, 30 Xueyuan Road, Haidian District, Beijing, 100083, China.
Liu J; Department of Chemistry, Waterloo Institute for Nanotechnology, University of Waterloo, 200 University Avenue West, Waterloo, ON N2L 3G1, Canada.
Li Z; Beijing Key Laboratory for Bioengineering and Sensing Technology, School of Chemistry and Biological Engineering, University of Science and Technology Beijing, 30 Xueyuan Road, Haidian District, Beijing, 100083, China. Electronic address: .
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Źródło:
Analytica chimica acta [Anal Chim Acta] 2023 Oct 02; Vol. 1276, pp. 341621. Date of Electronic Publication: 2023 Jul 13.
Typ publikacji:
Journal Article
MeSH Terms:
RNA, Viral*/genetics
RNA, Viral*/analysis
Metal Nanoparticles*
Colorimetry/methods ; Gold ; Nucleic Acid Amplification Techniques/methods ; Polymerase Chain Reaction ; Sensitivity and Specificity
Czasopismo naukowe

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