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Wyszukujesz frazę ""RNA-Seq"" wg kryterium: Temat


Tytuł:
Responsive Alternative Splicing Events of Opisthopappus Species against Salt Stress.
Autorzy:
Han M; School of Life Science, Shanxi Normal University, Taiyuan 030031, China.
Niu M; School of Life Science, Shanxi Normal University, Taiyuan 030031, China.
Gao T; School of Life Science, Shanxi Normal University, Taiyuan 030031, China.
Shen Y; School of Life Science, Shanxi Normal University, Taiyuan 030031, China.
Zhou X; School of Life Science, Shanxi Normal University, Taiyuan 030031, China.
Zhang Y; School of Life Science, Shanxi Normal University, Taiyuan 030031, China.
Liu L; School of Life Science, Shanxi Normal University, Taiyuan 030031, China.
Chai M; School of Life Science, Shanxi Normal University, Taiyuan 030031, China.
Sun G; Department of Botany, Saint Mary's University, Halifax, NS B3H 3C3, Canada.
Wang Y; School of Life Science, Shanxi Normal University, Taiyuan 030031, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Jan 19; Vol. 25 (2). Date of Electronic Publication: 2024 Jan 19.
Typ publikacji:
Journal Article
MeSH Terms:
Alternative Splicing*
Salt Stress*/genetics
RNA-Seq ; Salt Tolerance/genetics ; Plant Growth Regulators ; Gene Expression Regulation, Plant ; Transcriptome ; Gene Expression Profiling
Czasopismo naukowe
Tytuł:
RNA-Seq Analysis of Trans-Differentiated ARPE-19 Cells Transduced by AAV9-AIPL1 Vectors.
Autorzy:
Galieva A; Gene Therapy Department, Science Center for Translational Medicine, Sirius University of Science and Technology, 354340 Sirius, Russia.
Egorov A; Gene Therapy Department, Science Center for Translational Medicine, Sirius University of Science and Technology, 354340 Sirius, Russia.
Malogolovkin A; Gene Therapy Department, Science Center for Translational Medicine, Sirius University of Science and Technology, 354340 Sirius, Russia.; Molecular Virology Laboratory, First Moscow State Medical University (Sechenov University), 119991 Moscow, Russia.
Brovin A; Gene Therapy Department, Science Center for Translational Medicine, Sirius University of Science and Technology, 354340 Sirius, Russia.
Karabelsky A; Gene Therapy Department, Science Center for Translational Medicine, Sirius University of Science and Technology, 354340 Sirius, Russia.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Dec 22; Vol. 25 (1). Date of Electronic Publication: 2023 Dec 22.
Typ publikacji:
Journal Article
MeSH Terms:
Neurons*
Dependovirus*/genetics
Animals ; Humans ; RNA-Seq ; Cell Differentiation ; Sequence Analysis, RNA ; Antiviral Agents ; Adaptor Proteins, Signal Transducing
Czasopismo naukowe
Tytuł:
Integration of ATAC-Seq and RNA-Seq Analysis to Identify Key Genes in the Longissimus Dorsi Muscle Development of the Tianzhu White Yak.
Autorzy:
Li J; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Chen Z; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Bai Y; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Wei Y; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Guo D; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Liu Z; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Niu Y; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Shi B; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Zhang X; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Cai Y; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Zhao Z; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Hu J; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Wang J; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Liu X; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Li S; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Zhao F; Gansu Key Laboratory of Herbivorous Animal Biotechnology, College of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Dec 21; Vol. 25 (1). Date of Electronic Publication: 2023 Dec 21.
Typ publikacji:
Journal Article
MeSH Terms:
Chromatin Immunoprecipitation Sequencing*
Chromatin*
Cattle ; Animals ; RNA-Seq ; Muscle Development/genetics ; Muscle, Skeletal
Czasopismo naukowe
Tytuł:
MRI/RNA-Seq-Based Radiogenomics and Artificial Intelligence for More Accurate Staging of Muscle-Invasive Bladder Cancer.
Autorzy:
Qureshi TA; Biomedical Imaging Research Institute, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.; Department of Biomedical Science, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.
Chen X; Department of Biomedical Science, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.; Department of Urology, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.
Xie Y; Biomedical Imaging Research Institute, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.
Murakami K; Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.; Department of Urology, Kyoto University, Kyoto 606-8507, Japan.
Sakatani T; Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.
Kita Y; Department of Urology, Kyoto University, Kyoto 606-8507, Japan.
Kobayashi T; Department of Urology, Kyoto University, Kyoto 606-8507, Japan.
Miyake M; Department of Urology, Nara Medical University, Kashihara 634-8522, Japan.
Knott SRV; Department of Biomedical Science, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.; Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.
Li D; Biomedical Imaging Research Institute, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.
Rosser CJ; Department of Urology, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.; Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.
Furuya H; Department of Biomedical Science, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.; Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Dec 20; Vol. 25 (1). Date of Electronic Publication: 2023 Dec 20.
Typ publikacji:
Journal Article
MeSH Terms:
Artificial Intelligence*
Urinary Bladder Neoplasms*/diagnostic imaging
Urinary Bladder Neoplasms*/genetics
Humans ; RNA-Seq ; Magnetic Resonance Imaging ; Muscles
Czasopismo naukowe
Tytuł:
Combined BSA-Seq and RNA-Seq Reveal Genes Associated with the Visual Stay-Green of Maize ( Zea mays L.).
Autorzy:
Zheng R; College of Agronomy, Hunan Agricultural University, Changsha 410128, China.
Deng M; College of Agronomy, Hunan Agricultural University, Changsha 410128, China.; Maize Engineering Technology Research Center of Hunan Province, Changsha 410128, China.
Lv D; College of Agronomy, Hunan Agricultural University, Changsha 410128, China.
Tong B; College of Agronomy, Hunan Agricultural University, Changsha 410128, China.
Liu Y; College of Agronomy, Hunan Agricultural University, Changsha 410128, China.
Luo H; College of Agronomy, Hunan Agricultural University, Changsha 410128, China.; Maize Engineering Technology Research Center of Hunan Province, Changsha 410128, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Dec 18; Vol. 24 (24). Date of Electronic Publication: 2023 Dec 18.
Typ publikacji:
Journal Article
MeSH Terms:
Zea mays*/genetics
Edible Grain*/genetics
RNA-Seq ; Chromosome Mapping
Czasopismo naukowe
Tytuł:
The Genetic Dissection of Nitrogen Use-Related Traits in Flax ( Linum usitatissimum L.) at the Seedling Stage through the Integration of Multi-Locus GWAS, RNA-seq and Genomic Selection.
Autorzy:
Soto-Cerda BJ; Departamento de Ciencias Agropecuarias y Acuícolas, Universidad Católica de Temuco, Rudecindo Ortega 02950, Temuco 4781312, Chile.; Núcleo de Investigación en Producción Alimentaria, Facultad de Recursos Naturales, Universidad Católica de Temuco, Rudecindo Ortega 02950, Temuco 4781312, Chile.
Larama G; Center of Plant, Soil Interaction and Natural Resources Biotechnology, Scientific and Technological Bioresource Nucleus, Universidad de La Frontera, Temuco 4811230, Chile.; Biocontrol Research Laboratory, Universidad de La Frontera, Temuco 4811230, Chile.
Cloutier S; Ottawa Research and Development Centre, Agriculture and Agri-Food Canada, 960 Carling Avenue, Ottawa, ON K1A 0C6, Canada.
Fofana B; Charlottetown Research and Development Centre, Agriculture and Agri-Food Canada, 440 University Avenue, Charlottetown, PE C1A 4N6, Canada.
Inostroza-Blancheteau C; Departamento de Ciencias Agropecuarias y Acuícolas, Universidad Católica de Temuco, Rudecindo Ortega 02950, Temuco 4781312, Chile.; Núcleo de Investigación en Producción Alimentaria, Facultad de Recursos Naturales, Universidad Católica de Temuco, Rudecindo Ortega 02950, Temuco 4781312, Chile.
Aravena G; Departamento de Ciencias Agropecuarias y Acuícolas, Universidad Católica de Temuco, Rudecindo Ortega 02950, Temuco 4781312, Chile.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Dec 18; Vol. 24 (24). Date of Electronic Publication: 2023 Dec 18.
Typ publikacji:
Journal Article
MeSH Terms:
Flax*/genetics
Flax*/metabolism
Sexually Transmitted Diseases*
Genome-Wide Association Study ; Seedlings/metabolism ; RNA-Seq ; Nitrogen/metabolism ; Plant Breeding ; Genomics
Czasopismo naukowe
Tytuł:
Dual RNA-Seq Analysis Pinpoints a Balanced Regulation between Symbiosis and Immunity in Medicago truncatula - Sinorhizobium meliloti Symbiotic Nodules.
Autorzy:
Zhang D; National Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
Wu Q; National Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
Zhao Y; National Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
Yan Z; National Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
Xiao A; National Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
Yu H; National Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
Cao Y; National Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Nov 10; Vol. 24 (22). Date of Electronic Publication: 2023 Nov 10.
Typ publikacji:
Journal Article
MeSH Terms:
Medicago truncatula*/metabolism
Sinorhizobium meliloti*/genetics
Symbiosis/genetics ; RNA-Seq ; Mutation ; Nitrogen Fixation/genetics ; Root Nodules, Plant/genetics ; Root Nodules, Plant/microbiology
Czasopismo naukowe
Tytuł:
Integrated Amino Acids and Transcriptome Analysis Reveals Arginine Transporter SLC7A2 Is a Novel Regulator of Myogenic Differentiation.
Autorzy:
Huang T; Metabolic Control and Aging-Jiangxi Key Laboratory of Human Aging, Human Aging Research Institute (HARI), School of Life Science, Nanchang University, Nanchang 330031, China.
Zhou J; Metabolic Control and Aging-Jiangxi Key Laboratory of Human Aging, Human Aging Research Institute (HARI), School of Life Science, Nanchang University, Nanchang 330031, China.
Wang B; Metabolic Control and Aging-Jiangxi Key Laboratory of Human Aging, Human Aging Research Institute (HARI), School of Life Science, Nanchang University, Nanchang 330031, China.
Wang X; Metabolic Control and Aging-Jiangxi Key Laboratory of Human Aging, Human Aging Research Institute (HARI), School of Life Science, Nanchang University, Nanchang 330031, China.
Xiao W; Metabolic Control and Aging-Jiangxi Key Laboratory of Human Aging, Human Aging Research Institute (HARI), School of Life Science, Nanchang University, Nanchang 330031, China.
Yang M; Metabolic Control and Aging-Jiangxi Key Laboratory of Human Aging, Human Aging Research Institute (HARI), School of Life Science, Nanchang University, Nanchang 330031, China.
Liu Y; Metabolic Control and Aging-Jiangxi Key Laboratory of Human Aging, Human Aging Research Institute (HARI), School of Life Science, Nanchang University, Nanchang 330031, China.
Wang Q; Metabolic Control and Aging-Jiangxi Key Laboratory of Human Aging, Human Aging Research Institute (HARI), School of Life Science, Nanchang University, Nanchang 330031, China.
Xiang Y; Metabolic Control and Aging-Jiangxi Key Laboratory of Human Aging, Human Aging Research Institute (HARI), School of Life Science, Nanchang University, Nanchang 330031, China.
Lan X; Metabolic Control and Aging-Jiangxi Key Laboratory of Human Aging, Human Aging Research Institute (HARI), School of Life Science, Nanchang University, Nanchang 330031, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Dec 20; Vol. 25 (1). Date of Electronic Publication: 2023 Dec 20.
Typ publikacji:
Journal Article
MeSH Terms:
Amino Acids*
Antifibrinolytic Agents*
Animals ; Humans ; Mice ; Amino Acid Transport Systems, Basic/genetics ; Amino Acids, Branched-Chain ; Arginine ; Gene Expression Profiling ; Membrane Transport Proteins ; RNA-Seq
Czasopismo naukowe
Tytuł:
Comparative RNA-Seq Analysis between Monoecious and Androecious Plants Reveals Regulatory Mechanisms Controlling Female Flowering in Cucurbita pepo .
Autorzy:
Segura M; Department of Biology and Geology, Agri-Food Campus of International Excellence (CeiA3) and Research Center CIAIMBITAL, University of Almería, 04120 Almería, Spain.
García A; Department of Biology and Geology, Agri-Food Campus of International Excellence (CeiA3) and Research Center CIAIMBITAL, University of Almería, 04120 Almería, Spain.
Benítez Á; Department of Biology and Geology, Agri-Food Campus of International Excellence (CeiA3) and Research Center CIAIMBITAL, University of Almería, 04120 Almería, Spain.
Martínez C; Department of Biology and Geology, Agri-Food Campus of International Excellence (CeiA3) and Research Center CIAIMBITAL, University of Almería, 04120 Almería, Spain.
Jamilena M; Department of Biology and Geology, Agri-Food Campus of International Excellence (CeiA3) and Research Center CIAIMBITAL, University of Almería, 04120 Almería, Spain.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Dec 06; Vol. 24 (24). Date of Electronic Publication: 2023 Dec 06.
Typ publikacji:
Journal Article
MeSH Terms:
Cucurbita*
Humans ; Plant Growth Regulators/metabolism ; Ethylenes/metabolism ; RNA-Seq ; Flowers ; Transcription Factors/genetics ; Transcription Factors/metabolism ; Gene Expression Regulation, Plant
Czasopismo naukowe
Tytuł:
Whole-Transcriptome RNA Sequencing Uncovers the Global Expression Changes and RNA Regulatory Networks in Duck Embryonic Myogenesis.
Autorzy:
Liu S; College of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.; Poultry Research Institute, Jiangxi Agricultural University, Nanchang 330045, China.
Wu J; College of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.; Poultry Research Institute, Jiangxi Agricultural University, Nanchang 330045, China.
Zhang W; College of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.; Poultry Research Institute, Jiangxi Agricultural University, Nanchang 330045, China.
Jiang H; College of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.; Poultry Research Institute, Jiangxi Agricultural University, Nanchang 330045, China.
Zhou Y; College of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.; Poultry Research Institute, Jiangxi Agricultural University, Nanchang 330045, China.
Liu J; College of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.
Mao H; College of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.; Poultry Research Institute, Jiangxi Agricultural University, Nanchang 330045, China.
Liu S; College of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.; Poultry Research Institute, Jiangxi Agricultural University, Nanchang 330045, China.
Chen B; College of Animal Science and Technology, Jiangxi Agricultural University, Nanchang 330045, China.; Poultry Research Institute, Jiangxi Agricultural University, Nanchang 330045, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Nov 16; Vol. 24 (22). Date of Electronic Publication: 2023 Nov 16.
Typ publikacji:
Journal Article
MeSH Terms:
RNA, Long Noncoding*/genetics
RNA, Long Noncoding*/metabolism
MicroRNAs*/genetics
Animals ; Humans ; Transcriptome ; RNA, Circular/genetics ; Ducks/genetics ; Gene Expression Profiling ; Gene Regulatory Networks ; RNA, Messenger/genetics ; RNA-Seq ; Muscle Development/genetics
Czasopismo naukowe
Tytuł:
3'IsomiR Species Composition Affects Reliable Quantification of miRNA/isomiR Variants by Poly(A) RT-qPCR: Impact on Small RNA-Seq Profiling Validation.
Autorzy:
Ferre A; Human Molecular Genetics Group-Bellvitge Biomedical Research Institute (IDIBELL), 08908 Hospitalet de Llobregat, Spain.
Santiago L; Human Molecular Genetics Group-Bellvitge Biomedical Research Institute (IDIBELL), 08908 Hospitalet de Llobregat, Spain.
Sánchez-Herrero JF; High Content Genomics and Bioinformatics (HCGB), Germans Trias i Pujol Research Institute (IGTP), 08916 Badalona, Spain.
López-Rodrigo O; Laboratory of Andrology and Sperm Bank, Andrology Service-Puigvert Foundation, 08025 Barcelona, Spain.
Sánchez-Curbelo J; Laboratory of Andrology and Sperm Bank, Andrology Service-Puigvert Foundation, 08025 Barcelona, Spain.
Sumoy L; High Content Genomics and Bioinformatics (HCGB), Germans Trias i Pujol Research Institute (IGTP), 08916 Badalona, Spain.
Bassas L; Laboratory of Andrology and Sperm Bank, Andrology Service-Puigvert Foundation, 08025 Barcelona, Spain.
Larriba S; Human Molecular Genetics Group-Bellvitge Biomedical Research Institute (IDIBELL), 08908 Hospitalet de Llobregat, Spain.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Oct 21; Vol. 24 (20). Date of Electronic Publication: 2023 Oct 21.
Typ publikacji:
Journal Article
MeSH Terms:
MicroRNAs*/genetics
MicroRNAs*/metabolism
Humans ; RNA-Seq ; Sequence Analysis, RNA ; Base Sequence ; Protein Isoforms/metabolism
Czasopismo naukowe
Tytuł:
An Integrative ATAC-Seq and RNA-Seq Analysis of the Endometrial Tissues of Meishan and Duroc Pigs.
Autorzy:
Zhang H; National Engineering Laboratory for Animal Breeding, Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China.
Liu Z; National Engineering Laboratory for Animal Breeding, Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China.
Wang J; National Engineering Laboratory for Animal Breeding, Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China.
Zeng T; National Engineering Laboratory for Animal Breeding, Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China.
Ai X; National Engineering Laboratory for Animal Breeding, Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China.
Wu K; National Engineering Laboratory for Animal Breeding, Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Sep 30; Vol. 24 (19). Date of Electronic Publication: 2023 Sep 30.
Typ publikacji:
Journal Article
MeSH Terms:
Chromatin Immunoprecipitation Sequencing*
Fertility*/genetics
Pregnancy ; Female ; Swine ; Animals ; RNA-Seq ; Litter Size/genetics ; Chromatin
Czasopismo naukowe
Tytuł:
Functional Profiling of Soft Tissue Sarcoma Using Mechanistic Models.
Autorzy:
Payá-Milans M; Computational Medicine Platform, Andalusian Public Foundation Progress and Health-FPS, 41013 Sevilla, Spain.; Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), FPS, Hospital Virgen del Rocío, 41013 Seville, Spain.; Institute of Biomedicine of Seville, IBiS/University Hospital Virgen del Rocío/CSIC/University of Sevilla, 41013 Sevilla, Spain.
Peña-Chilet M; Computational Medicine Platform, Andalusian Public Foundation Progress and Health-FPS, 41013 Sevilla, Spain.; Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), FPS, Hospital Virgen del Rocío, 41013 Seville, Spain.; Institute of Biomedicine of Seville, IBiS/University Hospital Virgen del Rocío/CSIC/University of Sevilla, 41013 Sevilla, Spain.
Loucera C; Computational Medicine Platform, Andalusian Public Foundation Progress and Health-FPS, 41013 Sevilla, Spain.; Institute of Biomedicine of Seville, IBiS/University Hospital Virgen del Rocío/CSIC/University of Sevilla, 41013 Sevilla, Spain.
Esteban-Medina M; Computational Medicine Platform, Andalusian Public Foundation Progress and Health-FPS, 41013 Sevilla, Spain.; Institute of Biomedicine of Seville, IBiS/University Hospital Virgen del Rocío/CSIC/University of Sevilla, 41013 Sevilla, Spain.
Dopazo J; Computational Medicine Platform, Andalusian Public Foundation Progress and Health-FPS, 41013 Sevilla, Spain.; Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), FPS, Hospital Virgen del Rocío, 41013 Seville, Spain.; Institute of Biomedicine of Seville, IBiS/University Hospital Virgen del Rocío/CSIC/University of Sevilla, 41013 Sevilla, Spain.; FPS/ELIXIR-ES, Fundación Progreso y Salud (FPS), CDCA, Hospital Virgen del Rocío, 41013 Sevilla, Spain.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Sep 29; Vol. 24 (19). Date of Electronic Publication: 2023 Sep 29.
Typ publikacji:
Journal Article
MeSH Terms:
Sarcoma*/pathology
Soft Tissue Neoplasms*
Humans ; RNA-Seq ; Gene Expression Profiling ; Tumor Microenvironment/genetics
Czasopismo naukowe
Tytuł:
Insights into Repeated Renal Injury Using RNA-Seq with Two New RPTEC Cell Lines.
Autorzy:
Merrick BA; Mechanistic Toxicology Branch, Division of Translational Toxicology, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Martin NP; Viral Vector Core, Neurobiology Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Brooks AM; Biostatistics and Computational Biology Branch, Integrative Bioinformatics Support Group, Division of Intramural Research, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Foley JF; Mechanistic Toxicology Branch, Division of Translational Toxicology, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Dunlap PE; Mechanistic Toxicology Branch, Division of Translational Toxicology, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Ramaiahgari S; Mechanistic Toxicology Branch, Division of Translational Toxicology, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Fannin RD; Molecular Genomics Core Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Gerrish KE; Molecular Genomics Core Laboratory, Division of Intramural Research, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Sep 18; Vol. 24 (18). Date of Electronic Publication: 2023 Sep 18.
Typ publikacji:
Journal Article
MeSH Terms:
Kidney Tubules, Proximal*/metabolism
Epithelial Cells*
Humans ; Mice ; Animals ; RNA-Seq ; Cell Line ; Cisplatin/metabolism
Czasopismo naukowe
Tytuł:
Ficus carica Latex Modulates Immunity-Linked Gene Expression in Human Papillomavirus Positive Cervical Cancer Cell Lines: Evidence from RNA Seq Transcriptome Analysis.
Autorzy:
Cakir MO; School of Life Sciences, Pharmacy and Chemistry, Kingston University London, London KT1 2EE, UK.
Bilge U; Department of Biostatistic and Medical Informatics, Faculty of Medicine, Akdeniz University, 07058 Antalya, Turkey.
Naughton D; School of Life Sciences, Pharmacy and Chemistry, Kingston University London, London KT1 2EE, UK.
Ashrafi GH; School of Life Sciences, Pharmacy and Chemistry, Kingston University London, London KT1 2EE, UK.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Sep 04; Vol. 24 (17). Date of Electronic Publication: 2023 Sep 04.
Typ publikacji:
Journal Article
MeSH Terms:
Uterine Cervical Neoplasms*/genetics
Ficus*
Papillomavirus Infections*/complications
Papillomavirus Infections*/genetics
Humans ; Female ; RNA-Seq ; Human Papillomavirus Viruses ; Latex ; HeLa Cells ; Gene Expression Profiling ; Gene Expression
Czasopismo naukowe
Tytuł:
RNA-Seq and Comparative Transcriptomic Analyses of Asian Soybean Rust Resistant and Susceptible Soybean Genotypes Provide Insights into Identifying Disease Resistance Genes.
Autorzy:
Hao Q; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; Key Laboratory for Biological Sciences of Oil Crops, Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan 430062, China.
Yang H; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; Key Laboratory for Biological Sciences of Oil Crops, Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan 430062, China.
Chen S; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; Key Laboratory for Biological Sciences of Oil Crops, Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan 430062, China.
Qu Y; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; The Graduate School of Chinese Academy of Agricultural Sciences, Beijing 100081, China.
Zhang C; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; Key Laboratory for Biological Sciences of Oil Crops, Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan 430062, China.
Chen L; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; Key Laboratory for Biological Sciences of Oil Crops, Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan 430062, China.
Cao D; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; Key Laboratory for Biological Sciences of Oil Crops, Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan 430062, China.
Yuan S; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; Key Laboratory for Biological Sciences of Oil Crops, Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan 430062, China.
Guo W; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; Key Laboratory for Biological Sciences of Oil Crops, Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan 430062, China.
Yang Z; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; Key Laboratory for Biological Sciences of Oil Crops, Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan 430062, China.
Huang Y; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; Key Laboratory for Biological Sciences of Oil Crops, Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan 430062, China.
Shan Z; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; Key Laboratory for Biological Sciences of Oil Crops, Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan 430062, China.
Chen H; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; Key Laboratory for Biological Sciences of Oil Crops, Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan 430062, China.
Zhou X; Institute of Oil Crops Research, Chinese Academy of Agriculture Sciences, Wuhan 430062, China.; Key Laboratory for Biological Sciences of Oil Crops, Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan 430062, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Aug 30; Vol. 24 (17). Date of Electronic Publication: 2023 Aug 30.
Typ publikacji:
Journal Article
MeSH Terms:
Transcriptome*
Phakopsora pachyrhizi*/genetics
RNA-Seq ; Glycine max/genetics ; Disease Resistance/genetics ; Genotype
Czasopismo naukowe
Tytuł:
Integrating Single-Cell RNA-Seq and Bulk RNA-Seq Data to Explore the Key Role of Fatty Acid Metabolism in Breast Cancer.
Autorzy:
Chen Y; Department of Epidemiology and Health Statistics, Dalian Medical University, Dalian 116044, China.
Wu W; Department of Epidemiology and Health Statistics, Dalian Medical University, Dalian 116044, China.
Jin C; Department of Epidemiology and Health Statistics, Dalian Medical University, Dalian 116044, China.
Cui J; Department of Epidemiology and Health Statistics, Dalian Medical University, Dalian 116044, China.
Diao Y; Department of Epidemiology and Health Statistics, Dalian Medical University, Dalian 116044, China.
Wang R; Department of Epidemiology and Health Statistics, Dalian Medical University, Dalian 116044, China.
Xu R; Department of Epidemiology and Health Statistics, Dalian Medical University, Dalian 116044, China.
Yao Z; Department of Epidemiology and Health Statistics, Dalian Medical University, Dalian 116044, China.
Li X; Department of Epidemiology and Health Statistics, Dalian Medical University, Dalian 116044, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Aug 25; Vol. 24 (17). Date of Electronic Publication: 2023 Aug 25.
Typ publikacji:
Journal Article
MeSH Terms:
Breast Neoplasms*/genetics
Humans ; Female ; RNA-Seq ; Single-Cell Gene Expression Analysis ; Lipid Metabolism ; Fatty Acids ; Tumor Microenvironment/genetics
Czasopismo naukowe
Tytuł:
CXCR4 Expressed by Tumor-Infiltrating B Cells in Gastric Cancer Related to Survival in the Tumor Microenvironment: An Analysis Combining Single-Cell RNA Sequencing with Bulk RNA Sequencing.
Autorzy:
Su C; Department of Gastrointestinal Surgery, Zhongshan Hospital of Xiamen University, School of Medicine, Xiamen University, Xiamen 361102, China.; Institute of Gastrointestinal Oncology, School of Medicine, Xiamen University, Xiamen 361102, China.
Yu R; Department of Gastrointestinal Surgery, Zhongshan Hospital of Xiamen University, School of Medicine, Xiamen University, Xiamen 361102, China.; Institute of Gastrointestinal Oncology, School of Medicine, Xiamen University, Xiamen 361102, China.
Hong X; Institute of Gastrointestinal Oncology, School of Medicine, Xiamen University, Xiamen 361102, China.; Department of General Surgery, Zhongshan Hospital of Xiamen University, School of Medicine, Xiamen University, Xiamen 361102, China.
Zhang P; Institute of Gastrointestinal Oncology, School of Medicine, Xiamen University, Xiamen 361102, China.; State Key Laboratory of Stress Cell Biology, School of Life Sciences, Xiamen University, Xiamen 361102, China.
Guo Y; Institute of Gastrointestinal Oncology, School of Medicine, Xiamen University, Xiamen 361102, China.; State Key Laboratory of Stress Cell Biology, School of Life Sciences, Xiamen University, Xiamen 361102, China.
Cai JC; Department of Gastrointestinal Surgery, Zhongshan Hospital of Xiamen University, School of Medicine, Xiamen University, Xiamen 361102, China.; Institute of Gastrointestinal Oncology, School of Medicine, Xiamen University, Xiamen 361102, China.
Hou J; Department of Gastrointestinal Surgery, Zhongshan Hospital of Xiamen University, School of Medicine, Xiamen University, Xiamen 361102, China.; Institute of Gastrointestinal Oncology, School of Medicine, Xiamen University, Xiamen 361102, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Aug 17; Vol. 24 (16). Date of Electronic Publication: 2023 Aug 17.
Typ publikacji:
Journal Article
MeSH Terms:
Stomach Neoplasms*/genetics
B-Lymphocyte Subsets*
Adenocarcinoma*
Humans ; RNA-Seq ; Gene Regulatory Networks ; Receptors, CXCR4
Czasopismo naukowe
Tytuł:
RNA-Seq Virus Fraction in Lake Baikal and Treated Wastewaters.
Autorzy:
Potapov S; Limnological Institute, Siberian Branch of the Russian Academy of Sciences, Ulan-Batorskaya 3, 664033 Irkutsk, Russia.
Gorshkova A; Limnological Institute, Siberian Branch of the Russian Academy of Sciences, Ulan-Batorskaya 3, 664033 Irkutsk, Russia.
Krasnopeev A; Limnological Institute, Siberian Branch of the Russian Academy of Sciences, Ulan-Batorskaya 3, 664033 Irkutsk, Russia.
Podlesnaya G; Limnological Institute, Siberian Branch of the Russian Academy of Sciences, Ulan-Batorskaya 3, 664033 Irkutsk, Russia.
Tikhonova I; Limnological Institute, Siberian Branch of the Russian Academy of Sciences, Ulan-Batorskaya 3, 664033 Irkutsk, Russia.
Suslova M; Limnological Institute, Siberian Branch of the Russian Academy of Sciences, Ulan-Batorskaya 3, 664033 Irkutsk, Russia.
Kwon D; National Research Center Kurchatov Institute, Academician Kurchatov Square 1, 123098 Moscow, Russia.
Patrushev M; National Research Center Kurchatov Institute, Academician Kurchatov Square 1, 123098 Moscow, Russia.
Drucker V; Limnological Institute, Siberian Branch of the Russian Academy of Sciences, Ulan-Batorskaya 3, 664033 Irkutsk, Russia.
Belykh O; Limnological Institute, Siberian Branch of the Russian Academy of Sciences, Ulan-Batorskaya 3, 664033 Irkutsk, Russia.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Jul 27; Vol. 24 (15). Date of Electronic Publication: 2023 Jul 27.
Typ publikacji:
Journal Article
MeSH Terms:
Viruses*
RNA Viruses*/genetics
Humans ; Lakes/microbiology ; Wastewater ; RNA-Seq ; Water
Czasopismo naukowe
Tytuł:
Phospho-RNA-Seq Highlights Specific Small RNA Profiles in Plasma Extracellular Vesicles.
Autorzy:
Solaguren-Beascoa M; Department de Biomedicina, Facultat de Medicina i Ciències de la Salut, Institut de Neurociències, Universitat de Barcelona, C/Casanova 143, 08036 Barcelona, Spain.
Gámez-Valero A; Department de Biomedicina, Facultat de Medicina i Ciències de la Salut, Institut de Neurociències, Universitat de Barcelona, C/Casanova 143, 08036 Barcelona, Spain.; Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública (CIBERESP), Ministerio de Ciencia Innovación y Universidades, 28029 Madrid, Spain.
Escaramís G; Department de Biomedicina, Facultat de Medicina i Ciències de la Salut, Institut de Neurociències, Universitat de Barcelona, C/Casanova 143, 08036 Barcelona, Spain.; Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública (CIBERESP), Ministerio de Ciencia Innovación y Universidades, 28029 Madrid, Spain.
Herrero-Lorenzo M; Department de Biomedicina, Facultat de Medicina i Ciències de la Salut, Institut de Neurociències, Universitat de Barcelona, C/Casanova 143, 08036 Barcelona, Spain.
Ortiz AM; Grifols Scientific Innovation Office, 08022 Barcelona, Spain.
Minguet C; Grifols Scientific Innovation Office, 08022 Barcelona, Spain.
Gonzalo R; Grifols Scientific Innovation Office, 08022 Barcelona, Spain.
Bravo MI; Grifols Scientific Innovation Office, 08022 Barcelona, Spain.
Costa M; Grifols Scientific Innovation Office, 08022 Barcelona, Spain.
Martí E; Department de Biomedicina, Facultat de Medicina i Ciències de la Salut, Institut de Neurociències, Universitat de Barcelona, C/Casanova 143, 08036 Barcelona, Spain.; Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública (CIBERESP), Ministerio de Ciencia Innovación y Universidades, 28029 Madrid, Spain.
Pokaż więcej
Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Jul 19; Vol. 24 (14). Date of Electronic Publication: 2023 Jul 19.
Typ publikacji:
Journal Article
MeSH Terms:
MicroRNAs*/genetics
Extracellular Vesicles*/genetics
RNA, Small Untranslated*/genetics
RNA-Seq ; Sequence Analysis, RNA ; Biomarkers
Czasopismo naukowe

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