Cooper RM; Synthetic Biology Institute, University of California, San Diego, La Jolla, CA 92093, USA. Wright JA; Precision Cancer Medicine Theme, South Australia Health and Medical Research Institute, Adelaide, SA 5000, Australia. Ng JQ; Adelaide Medical School, University of Adelaide, Adelaide, SA 5000, Australia. Goyne JM; Precision Cancer Medicine Theme, South Australia Health and Medical Research Institute, Adelaide, SA 5000, Australia. Suzuki N; Precision Cancer Medicine Theme, South Australia Health and Medical Research Institute, Adelaide, SA 5000, Australia.; Adelaide Medical School, University of Adelaide, Adelaide, SA 5000, Australia. Lee YK; Adelaide Medical School, University of Adelaide, Adelaide, SA 5000, Australia. Ichinose M; Precision Cancer Medicine Theme, South Australia Health and Medical Research Institute, Adelaide, SA 5000, Australia.; Adelaide Medical School, University of Adelaide, Adelaide, SA 5000, Australia. Radford G; Adelaide Medical School, University of Adelaide, Adelaide, SA 5000, Australia. RyanFJ; Precision Cancer Medicine Theme, South Australia Health and Medical Research Institute, Adelaide, SA 5000, Australia.; Flinders Health and Medical Research Institute, Flinders University, Bedford Park, SA 5042, Australia. Kumar S; Department of Bioengineering, University of California, San Diego, La Jolla, CA 92093, USA. Thomas EM; Adelaide Medical School, University of Adelaide, Adelaide, SA 5000, Australia. Vrbanac L; Adelaide Medical School, University of Adelaide, Adelaide, SA 5000, Australia. Knight R; Molecular Biology Section, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA.; Department of Pediatrics, University of California, San Diego, La Jolla, CA 92093, USA.; Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA 92093, USA.; Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA 92093, USA. Woods SL; Precision Cancer Medicine Theme, South Australia Health and Medical Research Institute, Adelaide, SA 5000, Australia.; Adelaide Medical School, University of Adelaide, Adelaide, SA 5000, Australia. Worthley DL; Precision Cancer Medicine Theme, South Australia Health and Medical Research Institute, Adelaide, SA 5000, Australia.; Colonoscopy Clinic, Brisbane, QLD 4000, Australia. Hasty J; Synthetic Biology Institute, University of California, San Diego, La Jolla, CA 92093, USA.; Department of Bioengineering, University of California, San Diego, La Jolla, CA 92093, USA.; Molecular Biology Section, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA.; Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA 92093, USA.
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Źródło:
Science (New York, N.Y.) [Science] 2023 Aug 11; Vol. 381 (6658), pp. 682-686. Date of Electronic Publication: 2023 Aug 10.
Interpersonal variability of the human gut virome confounds disease signal detection in IBD.
Autorzy:
Stockdale SR; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland. Shkoporov AN; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland. Khokhlova EV; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland. Daly KM; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland. McDonnell SA; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland. O' Regan O; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland. Nolan JA; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland. Sutton TDS; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland. Clooney AG; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland. RyanFJ; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland. Sheehan D; Department of Medicine, University College Cork, Co, Cork, Ireland. Lavelle A; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland.; Department of Medicine, University College Cork, Co, Cork, Ireland. Draper LA; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland. Shanahan F; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland.; Department of Medicine, University College Cork, Co, Cork, Ireland. Ross RP; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland. Hill C; APC Microbiome Ireland, University College Cork, Co, Cork, Ireland. .; School of Microbiology, University College Cork, Co, Cork, Ireland. .
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Źródło:
Communications biology [Commun Biol] 2023 Feb 25; Vol. 6 (1), pp. 221. Date of Electronic Publication: 2023 Feb 25.
Selective Transcription Factor Blockade Reduces Human Retinal Endothelial Cell Expression of Intercellular Adhesion Molecule-1 and Leukocyte Binding.
Autorzy:
Ma Y; College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, Australia. Ashander LM; College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, Australia. Appukuttan B; College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, Australia. RyanFJ; College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, Australia.; Precision Medicine Theme, South Australian Health & Medical Research Institute, Adelaide, SA 5000, Australia. Tan ACR; College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, Australia. Matthews JM; College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, Australia. Michael MZ; College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, Australia. Lynn DJ; College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, Australia.; Precision Medicine Theme, South Australian Health & Medical Research Institute, Adelaide, SA 5000, Australia. Smith JR; College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, Australia.
Long-term perturbation of the peripheral immune system months after SARS-CoV-2 infection.
Autorzy:
RyanFJ; Precision Medicine Theme, South Australian Health and Medical Research Institute, Adelaide, SA, 5001, Australia. Hope CM; Women's and Children's Health Network, North Adelaide, SA, Australia.; Molecular Immunology, Robinson Research Institute, University of Adelaide, Adelaide, SA, Australia. Masavuli MG; Viral Immunology Group, Adelaide Medical School, University of Adelaide and Basil Hetzel Institute for Translational Health Research, Adelaide, SA, Australia. Lynn MA; Precision Medicine Theme, South Australian Health and Medical Research Institute, Adelaide, SA, 5001, Australia. Mekonnen ZA; Viral Immunology Group, Adelaide Medical School, University of Adelaide and Basil Hetzel Institute for Translational Health Research, Adelaide, SA, Australia. Yeow AEL; Viral Immunology Group, Adelaide Medical School, University of Adelaide and Basil Hetzel Institute for Translational Health Research, Adelaide, SA, Australia. Garcia-Valtanen P; Viral Immunology Group, Adelaide Medical School, University of Adelaide and Basil Hetzel Institute for Translational Health Research, Adelaide, SA, Australia. Al-Delfi Z; Viral Immunology Group, Adelaide Medical School, University of Adelaide and Basil Hetzel Institute for Translational Health Research, Adelaide, SA, Australia. Gummow J; Gene Silencing and Expression Core Facility, Adelaide Health and Medical Sciences, Robinson Research Institute, University of Adelaide, Adelaide, SA, Australia. Ferguson C; Infectious Diseases Department, Royal Adelaide Hospital, Central Adelaide Local Health Network, Adelaide, SA, Australia. O'Connor S; Intensive Care Unit, Royal Adelaide Hospital, Central Adelaide Local Health Network and Adelaide Medical School, University of Adelaide, Adelaide, SA, Australia. Reddi BAJ; Intensive Care Unit, Royal Adelaide Hospital, Central Adelaide Local Health Network and Adelaide Medical School, University of Adelaide, Adelaide, SA, Australia. Hissaria P; Infectious Diseases Department, Royal Adelaide Hospital, Central Adelaide Local Health Network, Adelaide, SA, Australia. Shaw D; Infectious Diseases Department, Royal Adelaide Hospital, Central Adelaide Local Health Network, Adelaide, SA, Australia. Kok-Lim C; Infectious Diseases Department, Royal Adelaide Hospital, Central Adelaide Local Health Network, Adelaide, SA, Australia.; Microbiology and Infectious Diseases Department, SA Pathology, Adelaide, SA, Australia. Gleadle JM; Department of Renal Medicine, Flinders Medical Centre, Flinders University, Bedford Park, SA, 5042, Australia.; Flinders Health and Medical Research Institute, Flinders University, Bedford Park, SA, 5042, Australia. Beard MR; Research Centre for Infectious Diseases, School of Biological Sciences, University of Adelaide, Adelaide, SA, 5005, Australia. Barry SC; Women's and Children's Health Network, North Adelaide, SA, Australia. .; Molecular Immunology, Robinson Research Institute, University of Adelaide, Adelaide, SA, Australia. . Grubor-Bauk B; Viral Immunology Group, Adelaide Medical School, University of Adelaide and Basil Hetzel Institute for Translational Health Research, Adelaide, SA, Australia. . Lynn DJ; Precision Medicine Theme, South Australian Health and Medical Research Institute, Adelaide, SA, 5001, Australia. .; Flinders Health and Medical Research Institute, Flinders University, Bedford Park, SA, 5042, Australia. .
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Źródło:
BMC medicine [BMC Med] 2022 Jan 14; Vol. 20 (1), pp. 26. Date of Electronic Publication: 2022 Jan 14.
Autochthonous faecal viral transfer (FVT) impacts the murine microbiome after antibiotic perturbation.
Autorzy:
Draper LA; APC Microbiome Ireland, University College Cork, Cork, Ireland.; School of Microbiology, University College Cork, Cork, Ireland. RyanFJ; APC Microbiome Ireland, University College Cork, Cork, Ireland.; School of Microbiology, University College Cork, Cork, Ireland.; Present Address: SAHMRI, North Terrace Adelaide, 5000, South Australia. Dalmasso M; APC Microbiome Ireland, University College Cork, Cork, Ireland.; School of Microbiology, University College Cork, Cork, Ireland.; Present Address: Normandie Univ, UNICAEN, ABTE, 14000, Caen, France. Casey PG; School of Microbiology, University College Cork, Cork, Ireland. McCann A; APC Microbiome Ireland, University College Cork, Cork, Ireland.; School of Microbiology, University College Cork, Cork, Ireland. Velayudhan V; APC Microbiome Ireland, University College Cork, Cork, Ireland.; School of Microbiology, University College Cork, Cork, Ireland. Ross RP; APC Microbiome Ireland, University College Cork, Cork, Ireland. Hill C; APC Microbiome Ireland, University College Cork, Cork, Ireland. .; School of Microbiology, University College Cork, Cork, Ireland. .
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Źródło:
BMC biology [BMC Biol] 2020 Nov 20; Vol. 18 (1), pp. 173. Date of Electronic Publication: 2020 Nov 20.
Application of machine learning techniques for creating urban microbial fingerprints.
Autorzy:
RyanFJ; APC Microbiome Ireland, University College Cork, Cork, Ireland. feargal.ryan@sahmri.com.; South Australian Health and Medical Research Institute, Adelaide, Australia. feargal.ryan@sahmri.com.; Flinders University, Adelaide, Australia. feargal.ryan@sahmri.com.
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Źródło:
Biology direct [Biol Direct] 2019 Aug 16; Vol. 14 (1), pp. 13. Date of Electronic Publication: 2019 Aug 16.
SPINGO: a rapid species-classifier for microbial amplicon sequences.
Autorzy:
Allard G; School of Microbiology and APC Microbiome Institute, University College Cork, Cork, Ireland. . RyanFJ; School of Microbiology and APC Microbiome Institute, University College Cork, Cork, Ireland. . Jeffery IB; School of Microbiology and APC Microbiome Institute, University College Cork, Cork, Ireland. . Claesson MJ; School of Microbiology and APC Microbiome Institute, University College Cork, Cork, Ireland. .
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Źródło:
BMC bioinformatics [BMC Bioinformatics] 2015 Oct 08; Vol. 16, pp. 324. Date of Electronic Publication: 2015 Oct 08.
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