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Wyszukujesz frazę ""Sequence Analysis, DNA"" wg kryterium: Temat


Tytuł :
White blood cell and cell-free DNA analyses for detection of residual disease in gastric cancer.
Autorzy :
Leal A; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.
van Grieken NCT; Department of Pathology, Cancer Center Amsterdam, Amsterdam UMC, Vrije Universiteit, Amsterdam, Netherlands.
Palsgrove DN; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.
Phallen J; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.
Medina JE; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.
Hruban C; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.
Broeckaert MAM; Department of Pathology, Cancer Center Amsterdam, Amsterdam UMC, Vrije Universiteit, Amsterdam, Netherlands.
Anagnostou V; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.
Adleff V; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.
Bruhm DC; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.
Canzoniero JV; Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.
Fiksel J; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.
Nordsmark M; Department of Oncology, Aarhus University Hospital, Aarhus, Denmark.
Warmerdam FARM; Department of Medical Oncology, Zuyderland Medical Centre, Sittard-Geleen/Heerlen, Netherlands.
Verheul HMW; Department of Medical Oncology, Cancer Center Amsterdam, Amsterdam UMC, Vrije Universiteit, Amsterdam, Netherlands.
van Spronsen DJ; Department of Hematology, Radboud University Nijmegen Medical Centre, Nijmegen, Netherlands.
Beerepoot LV; Department of Internal Medicine, St. Elisabeth-Tweesteden Ziekenhuis, Tilburg, Netherlands.
Geenen MM; Department of Internal Medicine, Onze Lieve Vrouwe Gasthuis, Amsterdam, Netherlands.
Portielje JEA; Department of Internal Medicine, HAGA hospital, The Hague, Netherlands.; Department of Internal Medicine, Leiden University Medical Center, Leiden, Netherlands.
Jansen EPM; Department of Radiation Oncology, Netherlands Cancer Institute, Amsterdam, Netherlands.
van Sandick J; Department of Surgery, Netherlands Cancer Institute, Amsterdam, Netherlands.
Meershoek-Klein Kranenbarg E; Department of Surgery, Leiden University Medical Center, Leiden, Netherlands.
van Laarhoven HWM; Department of Medical Oncology, Cancer Center Amsterdam, Amsterdam UMC, Amsterdam, Netherlands.
van der Peet DL; Department of Surgery, Cancer Center Amsterdam, Amsterdam UMC, Vrije Universiteit, Amsterdam, Netherlands.
van de Velde CJH; Department of Surgery, Leiden University Medical Center, Leiden, Netherlands.
Verheij M; Department of Radiation Oncology, Netherlands Cancer Institute, Amsterdam, Netherlands.
Fijneman R; Department of Pathology, Diagnostic Oncology, Netherlands Cancer Institute, Amsterdam, Netherlands.
Scharpf RB; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.
Meijer GA; Department of Pathology, Diagnostic Oncology, Netherlands Cancer Institute, Amsterdam, Netherlands.
Cats A; Department of Gastrointestinal Oncology, Netherlands Cancer Institute, Amsterdam, Netherlands.
Velculescu VE; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA. .
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Źródło :
Nature Communications [Nat Commun] 2020 Jan 27; Vol. 11 (1), pp. 525. Date of Electronic Publication: 2020 Jan 27.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
MeSH Terms :
Sequence Analysis, DNA*
Cell-Free Nucleic Acids/*chemistry
DNA, Neoplasm/*analysis
Leukocytes/*chemistry
Neoplasm Recurrence, Local/*diagnosis
Stomach Neoplasms/*diagnosis
DNA, Neoplasm/chemistry ; Hematopoiesis ; Humans ; Prognosis ; Proof of Concept Study ; Randomized Controlled Trials as Topic ; Stomach Neoplasms/genetics ; Survival Analysis
Czasopismo naukowe
Tytuł :
Molecular Identification of Necrophagous Dermestes Species in South Korea Using Cytochrome c Oxidase Subunit I Nucleotide Sequences (Genus Dermestes).
Autorzy :
Jang H; Department of Legal Medicine, Korea University College of Medicine, 73, Inchon-ro, Seongbuk-gu, Seoul, 02841, Korea.
Shin SE; Department of Legal Medicine, Korea University College of Medicine, 73, Inchon-ro, Seongbuk-gu, Seoul, 02841, Korea.
Youm KJ; Department of Legal Medicine, Korea University College of Medicine, 73, Inchon-ro, Seongbuk-gu, Seoul, 02841, Korea.
Karagozlu MZ; Department of Biotechnology, Sangmyung University, 20, Hongjimun 2-gil, Seodaemun-gu, Seoul, 03016, Korea.
Kim CB; Department of Biotechnology, Sangmyung University, 20, Hongjimun 2-gil, Seodaemun-gu, Seoul, 03016, Korea.
Ko KS; Department of Legal Medicine, Korea University College of Medicine, 73, Inchon-ro, Seongbuk-gu, Seoul, 02841, Korea.
Park SH; Department of Legal Medicine, Korea University College of Medicine, 73, Inchon-ro, Seongbuk-gu, Seoul, 02841, Korea.
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Źródło :
Journal Of Forensic Sciences [J Forensic Sci] 2020 Jan; Vol. 65 (1), pp. 283-287. Date of Electronic Publication: 2019 Aug 22.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Blackwell Pub Country of Publication: United States NLM ID: 0375370 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1556-4029 (Electronic) Linking ISSN: 00221198 NLM ISO Abbreviation: J. Forensic Sci. Subsets: MEDLINE
MeSH Terms :
Sequence Analysis, DNA*
Coleoptera/*genetics
Electron Transport Complex IV/*genetics
Animals ; DNA Primers ; Forensic Entomology ; Larva ; Phylogeny ; Polymerase Chain Reaction ; Republic of Korea ; Species Specificity
Czasopismo naukowe
Tytuł :
Investigating Coronary Artery Disease methylome through targeted bisulfite sequencing.
Autorzy :
Ghose S; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India.
Ghosh S; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India.
Tanwar VS; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India.
Tolani P; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India.
Kutum R; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India.
Sharma A; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India.
Bhardwaj N; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India.
Shamsudheen KV; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India.
Verma A; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India.
Jayarajan R; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India.
Dash D; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India.
Sivasubbu S; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India.
Scaria V; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India.
Seth S; Department of Cardiology, All India Institute of Medical Sciences, New Delhi, India.
Sengupta S; CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India. Electronic address: .
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Źródło :
Gene [Gene] 2019 Dec 30; Vol. 721, pp. 144107. Date of Electronic Publication: 2019 Sep 06.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Elsevier/North-Holland Country of Publication: Netherlands NLM ID: 7706761 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-0038 (Electronic) Linking ISSN: 03781119 NLM ISO Abbreviation: Gene Subsets: MEDLINE
MeSH Terms :
CpG Islands*
DNA Methylation*
Sequence Analysis, DNA*
Coronary Artery Disease/*metabolism
Adult ; Apolipoproteins/genetics ; Apoptosis Regulatory Proteins/genetics ; Apoptosis Regulatory Proteins/metabolism ; Coronary Artery Disease/genetics ; Coronary Artery Disease/pathology ; Female ; Humans ; Inflammation/genetics ; Inflammation/metabolism ; Inflammation/pathology ; Male ; Middle Aged ; Sulfites/chemistry
Czasopismo naukowe
Tytuł :
Targeted next-generation DNA sequencing identifies Notch signaling pathway mutation as a predictor of radiation response.
Autorzy :
Jeon SH; Department of Radiation Oncology, Seoul National University College of Medicine, Seoul, Korea.
Chie EK; Department of Radiation Oncology, Seoul National University College of Medicine, Seoul, Korea.; Institute of Radiation Medicine, Seoul National University Medical Research Center, Seoul, Korea.
Kim YJ; Department of Radiation Oncology, Seoul National University College of Medicine, Seoul, Korea.
Lee KH; Department of Internal Medicine, Seoul National University College of Medicine, Seoul, Korea.
Lee HS; Biomedical Research Institute, Seoul National University Hospital, Seoul, Korea.
Kim MJ; Department of Molecular Medicine and Biopharmaceutical Sciences, Graduate School of Convergence Science and Technology, Seoul National University, Seoul, Korea.
Im SA; Department of Internal Medicine, Seoul National University College of Medicine, Seoul, Korea.
Kim JI; Department of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Korea.
Kim TY; Department of Internal Medicine, Seoul National University College of Medicine, Seoul, Korea.; Department of Molecular Medicine and Biopharmaceutical Sciences, Graduate School of Convergence Science and Technology, Seoul National University, Seoul, Korea.
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Źródło :
International Journal Of Radiation Biology [Int J Radiat Biol] 2019 Dec; Vol. 95 (12), pp. 1640-1647. Date of Electronic Publication: 2019 Sep 26.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Taylor & Francis Country of Publication: England NLM ID: 8809243 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1362-3095 (Electronic) Linking ISSN: 09553002 NLM ISO Abbreviation: Int. J. Radiat. Biol. Subsets: MEDLINE; Space Life Sciences
MeSH Terms :
High-Throughput Nucleotide Sequencing*
Sequence Analysis, DNA*
Mutation/*radiation effects
Receptors, Notch/*metabolism
Signal Transduction/*genetics
Signal Transduction/*radiation effects
Adult ; Aged ; Female ; Genomics ; Humans ; Male ; Middle Aged ; Neoplasms/genetics ; Neoplasms/pathology ; Neoplasms/radiotherapy ; Treatment Outcome ; Young Adult
Czasopismo naukowe
Tytuł :
Draft Assembly of Phytophthora capsici from Long-Read Sequencing Uncovers Complexity.
Autorzy :
Cui C; School of Plant and Environmental Sciences, Virginia Tech, Blacksburg, VA 24061, U.S.A.
Herlihy JH; School of Plant and Environmental Sciences, Virginia Tech, Blacksburg, VA 24061, U.S.A.
Bombarely A; School of Plant and Environmental Sciences, Virginia Tech, Blacksburg, VA 24061, U.S.A.
McDowell JM; School of Plant and Environmental Sciences, Virginia Tech, Blacksburg, VA 24061, U.S.A.
Haak DC; School of Plant and Environmental Sciences, Virginia Tech, Blacksburg, VA 24061, U.S.A.
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Źródło :
Molecular Plant-Microbe Interactions: MPMI [Mol Plant Microbe Interact] 2019 Dec; Vol. 32 (12), pp. 1559-1563. Date of Electronic Publication: 2019 Oct 16.
Typ publikacji :
Journal Article
Journal Info :
Publisher: APS Press Country of Publication: United States NLM ID: 9107902 Publication Model: Print-Electronic Cited Medium: Print ISSN: 0894-0282 (Print) Linking ISSN: 08940282 NLM ISO Abbreviation: Mol. Plant Microbe Interact. Subsets: MEDLINE
MeSH Terms :
Genome, Protozoan*/genetics
Phytophthora*/genetics
Sequence Analysis, DNA*
Genome Size ; Genomics ; High-Throughput Nucleotide Sequencing
Czasopismo naukowe
Tytuł :
Assessment of computational methods for the analysis of single-cell ATAC-seq data.
Autorzy :
Chen H; Molecular Pathology Unit, Massachusetts General Hospital Research Institute, Charlestown, MA, 02129, USA.; Center for Cancer Research, Massachusetts General Hospital, Charlestown, MA, 02129, USA.; Department of Pathology, Harvard Medical School, Boston, MA, 02115, USA.; Broad Institute of Harvard and MIT, Cambridge, MA, 02142, USA.
Lareau C; Molecular Pathology Unit, Massachusetts General Hospital Research Institute, Charlestown, MA, 02129, USA.; Broad Institute of Harvard and MIT, Cambridge, MA, 02142, USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138, USA.
Andreani T; Molecular Pathology Unit, Massachusetts General Hospital Research Institute, Charlestown, MA, 02129, USA.; Center for Cancer Research, Massachusetts General Hospital, Charlestown, MA, 02129, USA.; Department of Pathology, Harvard Medical School, Boston, MA, 02115, USA.; Faculty of Biology, Computational Biology and Data Mining Lab, Johannes Gutenberg University of Mainz, 55128, Mainz, Germany.
Vinyard ME; Molecular Pathology Unit, Massachusetts General Hospital Research Institute, Charlestown, MA, 02129, USA.; Center for Cancer Research, Massachusetts General Hospital, Charlestown, MA, 02129, USA.; Department of Pathology, Harvard Medical School, Boston, MA, 02115, USA.; Broad Institute of Harvard and MIT, Cambridge, MA, 02142, USA.; Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, 02142, USA.
Garcia SP; Molecular Pathology Unit, Massachusetts General Hospital Research Institute, Charlestown, MA, 02129, USA.
Clement K; Molecular Pathology Unit, Massachusetts General Hospital Research Institute, Charlestown, MA, 02129, USA.; Center for Cancer Research, Massachusetts General Hospital, Charlestown, MA, 02129, USA.; Department of Pathology, Harvard Medical School, Boston, MA, 02115, USA.; Broad Institute of Harvard and MIT, Cambridge, MA, 02142, USA.
Andrade-Navarro MA; Faculty of Biology, Computational Biology and Data Mining Lab, Johannes Gutenberg University of Mainz, 55128, Mainz, Germany.
Buenrostro JD; Broad Institute of Harvard and MIT, Cambridge, MA, 02142, USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138, USA.
Pinello L; Molecular Pathology Unit, Massachusetts General Hospital Research Institute, Charlestown, MA, 02129, USA. .; Center for Cancer Research, Massachusetts General Hospital, Charlestown, MA, 02129, USA. .; Department of Pathology, Harvard Medical School, Boston, MA, 02115, USA. .; Broad Institute of Harvard and MIT, Cambridge, MA, 02142, USA. .
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Źródło :
Genome Biology [Genome Biol] 2019 Nov 18; Vol. 20 (1), pp. 241. Date of Electronic Publication: 2019 Nov 18.
Typ publikacji :
Comparative Study; Evaluation Study; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol. Subsets: MEDLINE
MeSH Terms :
Sequence Analysis, DNA*
Single-Cell Analysis*
Computational Biology/*methods
Epigenomics/*methods
Animals ; Benchmarking ; Humans ; Mice
Czasopismo naukowe
Tytuł :
Evaluating nanopore sequencing data processing pipelines for structural variation identification.
Autorzy :
Zhou A; Department of Genetics, Rutgers, the State University of New Jersey, Piscataway, NJ, 08854, USA.
Lin T; Department of Genetics, Rutgers, the State University of New Jersey, Piscataway, NJ, 08854, USA.
Xing J; Department of Genetics, Rutgers, the State University of New Jersey, Piscataway, NJ, 08854, USA. .; Human Genetics Institute of New Jersey, Rutgers, the State University of New Jersey, Piscataway, NJ, 08854, USA. .
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Źródło :
Genome Biology [Genome Biol] 2019 Nov 14; Vol. 20 (1), pp. 237. Date of Electronic Publication: 2019 Nov 14.
Typ publikacji :
Comparative Study; Evaluation Study; Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol. Subsets: MEDLINE
MeSH Terms :
Genomic Structural Variation*
Sequence Analysis, DNA*
Genomics/*methods
Sequence Alignment/*methods
Benchmarking ; Humans ; Nanopores
Czasopismo naukowe
Tytuł :
Development and optimization of a hybridization technique to type the classical class I and class II B genes of the chicken MHC.
Autorzy :
Potts ND; Department of Pathology, University of Cambridge, Tennis Court Road, Cambridge, CB2 1QP, UK.; LGC Ltd., Newmarket Road, Fordham, Ely, CB7 5WW, UK.
Bichet C; BioGéoSciences, CNRS UMR 5561, Université de Bourgogne Franche-Comté, 6 Boulevard Gabriel, 21000, Dijon, France.; Institute of Avian Research, An der Vogelwarte 21, 26386, Wilhelmshaven, Germany.
Merat L; Plate-Forme d'Infectiologie Expérimentale (PFIE), UE-1277, INRA Centre Val de Loire, 37380, Nouzilly, France.
Guitton E; Plate-Forme d'Infectiologie Expérimentale (PFIE), UE-1277, INRA Centre Val de Loire, 37380, Nouzilly, France.
Krupa AP; Department of Animal and Plant Sciences, University of Sheffield, Western Bank, S10 2TN, Sheffield, UK.
Burke TA; Department of Animal and Plant Sciences, University of Sheffield, Western Bank, S10 2TN, Sheffield, UK.
Kennedy LJ; Division of Population Health, Health Services Research & Primary Care, University of Manchester, Oxford Road, M13 9PL, Manchester, UK.
Sorci G; BioGéoSciences, CNRS UMR 5561, Université de Bourgogne Franche-Comté, 6 Boulevard Gabriel, 21000, Dijon, France.
Kaufman J; Department of Pathology, University of Cambridge, Tennis Court Road, Cambridge, CB2 1QP, UK. .; Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, CB3 0ES, UK. .
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Źródło :
Immunogenetics [Immunogenetics] 2019 Nov; Vol. 71 (10), pp. 647-663. Date of Electronic Publication: 2019 Nov 25.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Springer Verlag Country of Publication: United States NLM ID: 0420404 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-1211 (Electronic) Linking ISSN: 00937711 NLM ISO Abbreviation: Immunogenetics Subsets: MEDLINE
MeSH Terms :
Polymorphism, Genetic*
Genes, MHC Class I/*genetics
Genes, MHC Class II/*genetics
Nucleic Acid Hybridization/*methods
Sequence Analysis, DNA/*standards
Animals ; Chickens ; Polymorphism, Single-Stranded Conformational ; Reference Standards ; Sequence Analysis, DNA/methods
Czasopismo naukowe
Tytuł :
Base specific variation rates at mtDNA positions 16093 and 16183 in human hairs.
Autorzy :
Desmyter S; NICC - Belgian Institute for Forensic Science and Criminology, Vilvoordsesteenweg 100, B-1120, Brussels, Belgium. Electronic address: .
Dognaux S; NICC - Belgian Institute for Forensic Science and Criminology, Vilvoordsesteenweg 100, B-1120, Brussels, Belgium.
Noel F; NICC - Belgian Institute for Forensic Science and Criminology, Vilvoordsesteenweg 100, B-1120, Brussels, Belgium.
Prieto L; Instituto de Ciencias Forenses. Grupo de Medicina Xenómica. Universidade de Santiago de Compostela, Spain; Laboratorio ADN. Comisaría General de Policía Científica, Madrid, Spain.
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Źródło :
Forensic Science International. Genetics [Forensic Sci Int Genet] 2019 Nov; Vol. 43, pp. 102142. Date of Electronic Publication: 2019 Aug 12.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Elsevier Country of Publication: Netherlands NLM ID: 101317016 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1878-0326 (Electronic) Linking ISSN: 18724973 NLM ISO Abbreviation: Forensic Sci Int Genet Subsets: MEDLINE
MeSH Terms :
Polymorphism, Genetic*
Sequence Analysis, DNA*
DNA, Mitochondrial/*genetics
Hair/*chemistry
Base Sequence ; Epithelial Cells/chemistry ; Humans ; Mouth Mucosa/cytology ; Polymerase Chain Reaction
Czasopismo naukowe
Tytuł :
Pilot study for forensic evaluations of the Precision ID GlobalFiler™ NGS STR Panel v2 with the Ion S5™ system.
Autorzy :
Tao R; Institute of Forensic Medicine, West China School of Basic Medical Sciences & Forensic Medicine, Sichuan University, Chengdu 610041, PR China; Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Ministry of Justice, Shanghai 200063, PR China.
Qi W; Minhang Criminal Police, Shanghai Public Security Bureau, Shanghai 200199, PR China.
Chen C; Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Ministry of Justice, Shanghai 200063, PR China; College of Medicine and Forensics, Xi'an Jiaotong University Health Science Center, Xi'an, 710061, PR China.
Zhang J; Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Ministry of Justice, Shanghai 200063, PR China; Department of Forensic Science, Medical School of Soochow University, Suzhou 215123, PR China.
Yang Z; Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Ministry of Justice, Shanghai 200063, PR China; Department of Forensic Medicine, School of Basic Medical Science, Wenzhou Medical University, Wenzhou, 325035, PR China.
Song W; Minhang Criminal Police, Shanghai Public Security Bureau, Shanghai 200199, PR China.
Zhang S; Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Ministry of Justice, Shanghai 200063, PR China. Electronic address: .
Li C; Institute of Forensic Medicine, West China School of Basic Medical Sciences & Forensic Medicine, Sichuan University, Chengdu 610041, PR China; Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Ministry of Justice, Shanghai 200063, PR China. Electronic address: .
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Źródło :
Forensic Science International. Genetics [Forensic Sci Int Genet] 2019 Nov; Vol. 43, pp. 102147. Date of Electronic Publication: 2019 Aug 15.
Typ publikacji :
Evaluation Study; Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Elsevier Country of Publication: Netherlands NLM ID: 101317016 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1878-0326 (Electronic) Linking ISSN: 18724973 NLM ISO Abbreviation: Forensic Sci Int Genet Subsets: MEDLINE
MeSH Terms :
High-Throughput Nucleotide Sequencing*
Microsatellite Repeats*
Sequence Analysis, DNA*
Amelogenin/genetics ; DNA Fingerprinting ; Ethnic Groups/genetics ; Female ; Forensic Genetics ; Humans ; Male ; Pilot Projects ; Polymerase Chain Reaction ; Reproducibility of Results
Czasopismo naukowe
Tytuł :
ChromaClade: combined visualisation of phylogenetic and sequence data.
Autorzy :
Monit C; Division of Infection and Immunity, University College London, London, WC1E 6BT, UK. .
Goldstein RA; Division of Infection and Immunity, University College London, London, WC1E 6BT, UK.
Towers GJ; Division of Infection and Immunity, University College London, London, WC1E 6BT, UK.
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Źródło :
BMC Evolutionary Biology [BMC Evol Biol] 2019 Oct 15; Vol. 19 (1), pp. 186. Date of Electronic Publication: 2019 Oct 15.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: BioMed Central Country of Publication: England NLM ID: 100966975 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2148 (Electronic) Linking ISSN: 14712148 NLM ISO Abbreviation: BMC Evol. Biol. Subsets: MEDLINE
MeSH Terms :
Phylogeny*
Sequence Analysis, DNA*
Software*
Computational Biology/*methods
HIV-1/genetics ; Humans
Czasopismo naukowe
Tytuł :
The CpnClassiPhyR Is a Resource for cpn60 Universal Target-Based Classification of Phytoplasmas.
Autorzy :
Muirhead K; 1111 - 604 East Lake Blvd. NE, Airdrie, Alberta, Canada.
Pérez-López E; Department of Biology, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.
Bahder BW; University of Florida Fort Lauderdale Research and Education Center.
Hill JE; Department of Veterinary Microbiology, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.
Dumonceaux T; Department of Veterinary Microbiology, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.; Agriculture and Agri-Food Canada, Saskatoon Research and Development Centre, Saskatoon, Saskatchewan, Canada.
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Źródło :
Plant Disease [Plant Dis] 2019 Oct; Vol. 103 (10), pp. 2494-2497. Date of Electronic Publication: 2019 Aug 26.
Typ publikacji :
Journal Article
Journal Info :
Publisher: American Phytopathological Society Country of Publication: United States NLM ID: 9882809 Publication Model: Print-Electronic Cited Medium: Print ISSN: 0191-2917 (Print) Linking ISSN: 01912917 NLM ISO Abbreviation: Plant Dis. Subsets: MEDLINE
MeSH Terms :
Chaperonin 60*/genetics
Phytoplasma*/classification
Phytoplasma*/genetics
Sequence Analysis, DNA*
Software*/standards
DNA, Bacterial/genetics ; Phylogeny ; Plant Diseases/microbiology
Czasopismo naukowe
Tytuł :
The complete genome sequence of apple rootstock virus A, a novel nucleorhabdovirus identified in apple rootstocks.
Autorzy :
Baek D; Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea.; Biosystems and Bioengineering Program, University of Science and Technology (UST), Daejeon, 34113, Republic of Korea.; Korea Seed and Variety Service, Gimcheon, 39660, Republic of Korea.
Lim S; Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea.
Ju HJ; Department of Agricultural Biology, College of Agricultural Life Science, Chonbuk National University, Jeonju, 54896, Republic of Korea.
Kim HR; Horticultural and Herbal Crop Environment Division, National Institute of Horticultural and Herbal Science, RDA, Wanju, 55365, Republic of Korea.
Lee SH; School of Applied Biosciences, College of Agriculture and Life Sciences, Kyungpook National University, Daegu, 41566, Republic of Korea. .
Moon JS; Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea. .; Biosystems and Bioengineering Program, University of Science and Technology (UST), Daejeon, 34113, Republic of Korea. .
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Źródło :
Archives Of Virology [Arch Virol] 2019 Oct; Vol. 164 (10), pp. 2641-2644. Date of Electronic Publication: 2019 Aug 02.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Springer-Verlag Country of Publication: Austria NLM ID: 7506870 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-8798 (Electronic) Linking ISSN: 03048608 NLM ISO Abbreviation: Arch. Virol. Subsets: MEDLINE
MeSH Terms :
Genome, Viral*
Sequence Analysis, DNA*
Malus/*virology
Plant Roots/*virology
Rhabdoviridae/*classification
Rhabdoviridae/*genetics
Gene Order ; Open Reading Frames ; Phylogeny ; RNA, Viral/genetics ; Republic of Korea ; Rhabdoviridae/isolation & purification ; Sequence Homology, Nucleic Acid ; Viral Proteins/genetics
Czasopismo naukowe
Tytuł :
Genomic detection and molecular characterization of two distinct isolates of cycas necrotic stunt virus from Paeonia suffruticosa and Daphne odora.
Autorzy :
Lim S; Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea.
Kwon SY; Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea.
Lee JH; Institute for Bioresources Research, Gyeongsangbuk-do Agricultural Research and Extension Services, Andong, 36614, Republic of Korea.
Cho HS; Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea.
Kim HS; Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea.
Park JM; Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea.
Lee SH; School of Applied Biosciences, College of Agriculture and Life Sciences, Kyungpook National University, Daegu, 41566, Republic of Korea. .
Moon JS; Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea. .
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Źródło :
Virus Genes [Virus Genes] 2019 Oct; Vol. 55 (5), pp. 734-737. Date of Electronic Publication: 2019 Jul 27.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Kluwer Academic Country of Publication: United States NLM ID: 8803967 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1572-994X (Electronic) Linking ISSN: 09208569 NLM ISO Abbreviation: Virus Genes Subsets: MEDLINE
MeSH Terms :
Genome, Viral*
Sequence Analysis, DNA*
Daphne/*virology
Nepovirus/*classification
Nepovirus/*isolation & purification
Paeonia/*virology
Nepovirus/genetics ; Phylogeny ; Polyproteins/genetics ; RNA, Viral/genetics ; Sequence Homology, Amino Acid
Czasopismo naukowe
Tytuł :
Complete genome analysis of the novel Enterococcus faecalis phage vB_EfaS_AL3.
Autorzy :
Yuan Y; School of Bioengineering, Dalian University of Technology, Dalian, 116024, China.
Zhao F; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China.
Wang L; School of Bioengineering, Dalian University of Technology, Dalian, 116024, China.; Ministry of Education Center for Food Safety of Animal Origin, Dalian, 116600, China.
Tan D; Dalian SEM Bio-Engineering Technology Co. Ltd., Dalian, 116620, China.
Cong C; School of Bioengineering, Dalian University of Technology, Dalian, 116024, China.
Li X; School of Bioengineering, Dalian University of Technology, Dalian, 116024, China.; Ministry of Education Center for Food Safety of Animal Origin, Dalian, 116600, China.
Xu Y; School of Bioengineering, Dalian University of Technology, Dalian, 116024, China. .; Ministry of Education Center for Food Safety of Animal Origin, Dalian, 116600, China. .
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Źródło :
Archives Of Virology [Arch Virol] 2019 Oct; Vol. 164 (10), pp. 2599-2603. Date of Electronic Publication: 2019 Jul 05.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Springer-Verlag Country of Publication: Austria NLM ID: 7506870 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-8798 (Electronic) Linking ISSN: 03048608 NLM ISO Abbreviation: Arch. Virol. Subsets: MEDLINE
MeSH Terms :
Genome, Viral*
Phylogeny*
Sequence Analysis, DNA*
Bacteriophages/*genetics
Enterococcus faecalis/*virology
Waste Water/*virology
Bacteriolysis ; Base Composition ; China ; DNA/chemistry ; DNA/genetics ; DNA, Viral/chemistry ; DNA, Viral/genetics ; Microscopy, Electron, Transmission ; Molecular Sequence Annotation ; Viral Plaque Assay ; Virion/ultrastructure
Czasopismo naukowe
Tytuł :
Evidence for swine and human papillomavirus in pig slurry in Italy.
Autorzy :
Di Bonito P; Viral Hepatitis, Oncoviruses and Retroviruses (EVOR) Unit, Department of Infectious Diseases, Istituto Superiore di Sanità, Rome, Italy.
Galati L; Viral Hepatitis, Oncoviruses and Retroviruses (EVOR) Unit, Department of Infectious Diseases, Istituto Superiore di Sanità, Rome, Italy.
Focà A; School of medicine, 'Magna Graecia' University, Catanzaro, Italy.
Brambilla M; Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria (CREA), Research Centre for Engineering and Agri Food Processing, Treviglio, BG, Italy.
Bisaglia C; Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria (CREA), Research Centre for Engineering and Agri Food Processing, Treviglio, BG, Italy.
Bonanno Ferraro G; Department of Environment and Health, Istituto Superiore di Sanità, Rome, Italy.
Mancini P; Department of Environment and Health, Istituto Superiore di Sanità, Rome, Italy.
Iaconelli M; Department of Environment and Health, Istituto Superiore di Sanità, Rome, Italy.
Veneri C; Department of Environment and Health, Istituto Superiore di Sanità, Rome, Italy.
La Rosa G; Department of Environment and Health, Istituto Superiore di Sanità, Rome, Italy.
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Źródło :
Journal Of Applied Microbiology [J Appl Microbiol] 2019 Oct; Vol. 127 (4), pp. 1246-1254. Date of Electronic Publication: 2019 Jul 12.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Published for the Society for Applied Bacteriology by Blackwell Science Country of Publication: England NLM ID: 9706280 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-2672 (Electronic) Linking ISSN: 13645072 NLM ISO Abbreviation: J. Appl. Microbiol. Subsets: MEDLINE
MeSH Terms :
Polymerase Chain Reaction*
Sequence Analysis, DNA*
Manure/*virology
Papillomaviridae/*isolation & purification
Animals ; DNA, Viral/genetics ; Humans ; Italy ; Papillomaviridae/genetics ; Papillomavirus Infections/virology ; Swine
Czasopismo naukowe
Tytuł :
Identification of Functional and Druggable Sites in Aspergillus fumigatus Essential Phosphatases by Virtual Screening.
Autorzy :
Thornton BP; School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester Academic Health Science Centre, Manchester M13 9PT, UK.
Johns A; School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester Academic Health Science Centre, Manchester M13 9PT, UK.
Al-Shidhani R; School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester Academic Health Science Centre, Manchester M13 9PT, UK.
Álvarez-Carretero S; School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester Academic Health Science Centre, Manchester M13 9PT, UK.
Storer ISR; School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester Academic Health Science Centre, Manchester M13 9PT, UK.
Bromley MJ; School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester Academic Health Science Centre, Manchester M13 9PT, UK.
Tabernero L; School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester Academic Health Science Centre, Manchester M13 9PT, UK. .
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Źródło :
International Journal Of Molecular Sciences [Int J Mol Sci] 2019 Sep 19; Vol. 20 (18). Date of Electronic Publication: 2019 Sep 19.
Typ publikacji :
Journal Article
Journal Info :
Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067 (Electronic) Linking ISSN: 14220067 NLM ISO Abbreviation: Int J Mol Sci Subsets: MEDLINE
MeSH Terms :
Genome, Fungal*
Sequence Analysis, DNA*
Software*
Aspergillus fumigatus/*enzymology
Fungal Proteins/*genetics
Phosphoric Monoester Hydrolases/*genetics
Aspergillus fumigatus/genetics ; Cell Cycle/genetics
Czasopismo naukowe
Tytuł :
Deconvolution of nucleic-acid length distributions: a gel electrophoresis analysis tool and applications.
Autorzy :
Ziraldo R; Department of Bioengineering, University of Texas at Dallas, 800 W Campbell Road, Richardson, TX 75080, USA.
Shoura MJ; Department of Pathology, Stanford University School of Medicine, 300 Pasteur Drive, Stanford, CA 94305, USA.; Department of Genetics, Stanford University School of Medicine, 300 Pasteur Drive, Stanford, CA 94305, USA.
Fire AZ; Department of Pathology, Stanford University School of Medicine, 300 Pasteur Drive, Stanford, CA 94305, USA.; Department of Genetics, Stanford University School of Medicine, 300 Pasteur Drive, Stanford, CA 94305, USA.
Levene SD; Department of Bioengineering, University of Texas at Dallas, 800 W Campbell Road, Richardson, TX 75080, USA.; Department of Biological Sciences, University of Texas at Dallas, 800 W Campbell Road, Richardson, TX 75080, USA.; Department of Physics, University of Texas at Dallas, 800 W Campbell Road, Richardson, TX 75080, USA.
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Źródło :
Nucleic Acids Research [Nucleic Acids Res] 2019 Sep 19; Vol. 47 (16), pp. e92.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info :
Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res. Subsets: MEDLINE
MeSH Terms :
Software*
DNA/*analysis
Electrophoresis, Agar Gel/*methods
Sequence Analysis, DNA/*statistics & numerical data
Animals ; Bacteriophage lambda/genetics ; Caenorhabditis elegans/genetics ; DNA/chemistry ; DNA/genetics ; DNA Fragmentation ; Endonucleases/chemistry ; Gene Library ; High-Throughput Nucleotide Sequencing/methods ; Humans ; Quality Control ; Sequence Analysis, DNA/methods
Czasopismo naukowe
Tytuł :
Quantitative MNase-seq accurately maps nucleosome occupancy levels.
Autorzy :
Chereji RV; Division of Developmental Biology, Eunice Kennedy Shriver National Institute for Child Health and Human Development, National Institutes of Health, Bethesda, MD, 20892, USA.
Bryson TD; Howard Hughes Medical Institute and Basic Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, 98109, USA.
Henikoff S; Howard Hughes Medical Institute and Basic Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, 98109, USA. .
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Źródło :
Genome Biology [Genome Biol] 2019 Sep 13; Vol. 20 (1), pp. 198. Date of Electronic Publication: 2019 Sep 13.
Typ publikacji :
Journal Article; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol. Subsets: MEDLINE
MeSH Terms :
Micrococcal Nuclease*
Nucleosomes*
Sequence Analysis, DNA*
Animals ; Base Sequence ; Cell Line ; Chromatin ; DNA/chemistry ; Drosophila melanogaster/genetics ; High-Throughput Nucleotide Sequencing ; Kinetics ; Transcription, Genetic
Czasopismo naukowe
Tytuł :
Profiling chromatin states using single-cell itChIP-seq.
Autorzy :
Ai S; Institute of Molecular Medicine, Beijing Key Laboratory of Cardiometabolic Molecular Medicine, Peking University, Beijing, China.
Xiong H; Institute of Molecular Medicine, Beijing Key Laboratory of Cardiometabolic Molecular Medicine, Peking University, Beijing, China.; Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, China.; Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, China.
Li CC; Institute of Molecular Medicine, Beijing Key Laboratory of Cardiometabolic Molecular Medicine, Peking University, Beijing, China.
Luo Y; Institute of Molecular Medicine, Beijing Key Laboratory of Cardiometabolic Molecular Medicine, Peking University, Beijing, China.; Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, China.; Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, China.
Shi Q; Center for Statistical Science, Center for Bioinformatics, Peking University, Beijing, China.
Liu Y; Institute of Molecular Medicine, Beijing Key Laboratory of Cardiometabolic Molecular Medicine, Peking University, Beijing, China.
Yu X; Institute of Molecular Medicine, Beijing Key Laboratory of Cardiometabolic Molecular Medicine, Peking University, Beijing, China.; Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, China.; Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, China.
Li C; Center for Statistical Science, Center for Bioinformatics, Peking University, Beijing, China.
He A; Institute of Molecular Medicine, Beijing Key Laboratory of Cardiometabolic Molecular Medicine, Peking University, Beijing, China. .; Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, China. .
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Źródło :
Nature Cell Biology [Nat Cell Biol] 2019 Sep; Vol. 21 (9), pp. 1164-1172. Date of Electronic Publication: 2019 Sep 03.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Macmillan Magazines Ltd. Country of Publication: England NLM ID: 100890575 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4679 (Electronic) Linking ISSN: 14657392 NLM ISO Abbreviation: Nat. Cell Biol. Subsets: MEDLINE
MeSH Terms :
Sequence Analysis, DNA*/methods
Chromatin/*metabolism
Endothelial Cells/*metabolism
Protein Processing, Post-Translational/*genetics
Animals ; Binding Sites ; Chromatin Immunoprecipitation/methods ; Epigenomics/methods ; Histones/metabolism ; Mice, Transgenic
Czasopismo naukowe

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