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Wyszukujesz frazę ""Sequence Analysis, DNA"" wg kryterium: Temat


Tytuł :
Alvis: a tool for contig and read ALignment VISualisation and chimera detection.
Autorzy :
Martin S; Earlham Institute, Norwich Research Park, Norwich, UK.
Leggett RM; Earlham Institute, Norwich Research Park, Norwich, UK. .
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Źródło :
BMC bioinformatics [BMC Bioinformatics] 2021 Mar 16; Vol. 22 (1), pp. 124. Date of Electronic Publication: 2021 Mar 16.
Typ publikacji :
Journal Article
MeSH Terms :
Chimera*
High-Throughput Nucleotide Sequencing*
Sequence Analysis, DNA*
Data Visualization ; Genome ; Humans
Czasopismo naukowe
Tytuł :
[Identification of a novel HLA-DQB1*03 allele caused by variant of a single nucleotide].
Autorzy :
Quan Z; Institute of Transfusion Medicine, Shenzhen Blood Center, Shenzhen, Guangdong 518020, China. 958567432@ qq.com.
Zou H
Zhong Y
Chen H
Deng Z
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Źródło :
Zhonghua yi xue yi chuan xue za zhi = Zhonghua yixue yichuanxue zazhi = Chinese journal of medical genetics [Zhonghua Yi Xue Yi Chuan Xue Za Zhi] 2021 Mar 10; Vol. 38 (3), pp. 282-285.
Typ publikacji :
Case Reports; Journal Article
MeSH Terms :
HLA-DQ beta-Chains*/genetics
Nucleotides*
Sequence Analysis, DNA*
Alleles ; Base Sequence ; Humans ; Male ; Polymorphism, Single Nucleotide
Czasopismo naukowe
Tytuł :
An Algorithm for Gene Fragment Reconstruction.
Autorzy :
Fang N; School of Sciences, Southwest Petroleum University, Chengdu, 610500, Sichuan, People's Republic of China.
Wang K; School of Mathematics and Statistics, Southwest University, Chongqing, 400715, People's Republic of China. .
Tong D; Department of Urology, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China. .
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Źródło :
Interdisciplinary sciences, computational life sciences [Interdiscip Sci] 2021 Mar; Vol. 13 (1), pp. 118-127. Date of Electronic Publication: 2021 Feb 20.
Typ publikacji :
Journal Article
MeSH Terms :
Algorithms*
Sequence Analysis, DNA*
Base Sequence ; Models, Theoretical ; Statistics as Topic
Czasopismo naukowe
Tytuł :
Genome-wide RAD sequencing resolves the evolutionary history of serrate leaf Juniperus and reveals discordance with chloroplast phylogeny.
Autorzy :
Uckele KA; Department of Biology, MS 314, University of Nevada, Reno, Max Fleischmann Agriculture Building, 1664 N Virginia St., Reno, NV 89557, USA. Electronic address: .
Adams RP; Baylor University, Utah Lab, 201 N 5500 W, Hurricane, UT 84790, USA. Electronic address: .
Schwarzbach AE; Department of Health and Biomedical Sciences, University of Texas - Rio Grande Valley, 1 W University Drive, Brownsville, TX 78520, USA. Electronic address: .
Parchman TL; Department of Biology, MS 314, University of Nevada, Reno, Max Fleischmann Agriculture Building, 1664 N Virginia St., Reno, NV 89557, USA. Electronic address: .
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Mar; Vol. 156, pp. 107022. Date of Electronic Publication: 2020 Nov 24.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Genome, Plant*
Phylogeny*
Sequence Analysis, DNA*
Chloroplasts/*genetics
Juniperus/*genetics
Plant Leaves/*anatomy & histology
Base Sequence ; Bayes Theorem ; DNA, Chloroplast/genetics ; Fossils ; Geography ; Hybridization, Genetic ; Likelihood Functions
Czasopismo naukowe
Tytuł :
In situ genome sequencing resolves DNA sequence and structure in intact biological samples.
Autorzy :
Payne AC; Media Arts and Sciences, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard University, Cambridge, MA 02142, USA.
Chiang ZD; Broad Institute of MIT and Harvard University, Cambridge, MA 02142, USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA.
Reginato PL; Media Arts and Sciences, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard University, Cambridge, MA 02142, USA.; Department of Biological Engineering, MIT, Cambridge, MA, 02139, USA.; Department of Genetics, Harvard Medical School, Boston, MA 02115, USA.; Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA 02115, USA.
Mangiameli SM; Broad Institute of MIT and Harvard University, Cambridge, MA 02142, USA.
Murray EM; Broad Institute of MIT and Harvard University, Cambridge, MA 02142, USA.
Yao CC; Broad Institute of MIT and Harvard University, Cambridge, MA 02142, USA.; Department of Brain and Cognitive Sciences, MIT, Cambridge, MA 02139, USA.
Markoulaki S; Whitehead Institute for Biomedical Research, Cambridge, MA 02139, USA.
Earl AS; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA.
Labade AS; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA.
Jaenisch R; Whitehead Institute for Biomedical Research, Cambridge, MA 02139, USA.; Department of Biology, MIT, Cambridge, MA 02139, USA.
Church GM; Department of Genetics, Harvard Medical School, Boston, MA 02115, USA.; Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA 02115, USA.
Boyden ES; Media Arts and Sciences, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA. .; Department of Biological Engineering, MIT, Cambridge, MA, 02139, USA.; Department of Brain and Cognitive Sciences, MIT, Cambridge, MA 02139, USA.; McGovern Institute, MIT, Cambridge, MA 02139, USA.; Koch Institute, MIT, Cambridge, MA 02139, USA.; Howard Hughes Medical Institute, Cambridge, MA 02139, USA.; Centers for Neurobiological Engineering and Extreme Bionics, MIT, Cambridge, MA 02139, USA.
Buenrostro JD; Broad Institute of MIT and Harvard University, Cambridge, MA 02142, USA. .; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA.
Chen F; Broad Institute of MIT and Harvard University, Cambridge, MA 02142, USA. .; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA.
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Źródło :
Science (New York, N.Y.) [Science] 2021 Feb 26; Vol. 371 (6532). Date of Electronic Publication: 2020 Dec 31.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Genome*
Genome, Human*
Sequence Analysis, DNA*
Animals ; Base Sequence ; Cell Nucleus/genetics ; Cell Nucleus/ultrastructure ; Chromatin/chemistry ; Chromatin/ultrastructure ; Chromosome Positioning ; Chromosomes, Human/ultrastructure ; Chromosomes, Mammalian/ultrastructure ; Embryo, Mammalian ; Embryonic Development ; Epigenesis, Genetic ; Fibroblasts ; High-Throughput Nucleotide Sequencing ; Humans ; Mice ; Single-Cell Analysis ; Spatial Analysis
Czasopismo naukowe
Tytuł :
Whole genome sequencing in the Middle Eastern Qatari population identifies genetic associations with 45 clinically relevant traits.
Autorzy :
Thareja G; Bioinformatics Core, Weill Cornell Medicine-Qatar, Education City, Doha, Qatar.
Al-Sarraj Y; College of Health and Life Sciences, Hamad Bin Khalifa University, Education City, Doha, Qatar.; Qatar Biomedical Research Institute (QBRI), Hamad Bin Khalifa University, Doha, Qatar.
Belkadi A; Bioinformatics Core, Weill Cornell Medicine-Qatar, Education City, Doha, Qatar.; Department of Biophysics and Physiology, Weill Cornell Medicine, New York, NY, USA.
Almotawa M; College of Health and Life Sciences, Hamad Bin Khalifa University, Education City, Doha, Qatar.; Qatar Biomedical Research Institute (QBRI), Hamad Bin Khalifa University, Doha, Qatar.
Suhre K; Bioinformatics Core, Weill Cornell Medicine-Qatar, Education City, Doha, Qatar. .; Department of Biophysics and Physiology, Weill Cornell Medicine, New York, NY, USA. .
Albagha OME; College of Health and Life Sciences, Hamad Bin Khalifa University, Education City, Doha, Qatar. .; Qatar Biomedical Research Institute (QBRI), Hamad Bin Khalifa University, Doha, Qatar. .; Centre for Genomic and Experimental Medicine, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK. .
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Corporate Authors :
Qatar Genome Program Research (QGPR) Consortium
Źródło :
Nature communications [Nat Commun] 2021 Feb 23; Vol. 12 (1), pp. 1250. Date of Electronic Publication: 2021 Feb 23.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Genetics, Population*
Genome, Human*
Genome-Wide Association Study*
Quantitative Trait, Heritable*
Sequence Analysis, DNA*
Biological Specimen Banks ; Gene Frequency/genetics ; Genetic Loci ; Humans ; Japan ; Linkage Disequilibrium/genetics ; Multifactorial Inheritance/genetics ; Principal Component Analysis ; Qatar
Czasopismo naukowe
Tytuł :
Respiratory viral co-infections among SARS-CoV-2 cases confirmed by virome capture sequencing.
Autorzy :
Kim KW; School of Women's and Children's Health, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia.; Virology Research Laboratory, Serology and Virology Division (SAViD), NSW Health Pathology, Prince of Wales Hospital, Sydney, NSW, Australia.
Deveson IW; Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Sydney, Australia.; St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia.
Pang CNI; School of Biotechnology and Biomolecular Sciences, Faculty of Science, University of New South Wales, Sydney, NSW, Australia.
Yeang M; Virology Research Laboratory, Serology and Virology Division (SAViD), NSW Health Pathology, Prince of Wales Hospital, Sydney, NSW, Australia.
Naing Z; Virology Research Laboratory, Serology and Virology Division (SAViD), NSW Health Pathology, Prince of Wales Hospital, Sydney, NSW, Australia.
Adikari T; School of Medical Sciences, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia.; The Kirby Institute for Infection and Immunity, University of New South Wales, Sydney, NSW, Australia.
Hammond JM; Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Sydney, Australia.
Stevanovski I; Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Sydney, Australia.
Beukers AG; Department of Infectious Diseases and Microbiology, NSW Health Pathology, Royal Prince Alfred Hospital, Sydney, NSW, Australia.
Verich A; The Kirby Institute for Infection and Immunity, University of New South Wales, Sydney, NSW, Australia.
Yin S; Research Technology Services, Research Infrastructure Division, University of New South Wales, Sydney, NSW, Australia.
McFarlane D; Research Technology Services, Research Infrastructure Division, University of New South Wales, Sydney, NSW, Australia.
Wilkins MR; School of Biotechnology and Biomolecular Sciences, Faculty of Science, University of New South Wales, Sydney, NSW, Australia.
Stelzer-Braid S; Virology Research Laboratory, Serology and Virology Division (SAViD), NSW Health Pathology, Prince of Wales Hospital, Sydney, NSW, Australia.; School of Medical Sciences, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia.
Bull RA; School of Medical Sciences, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia.; The Kirby Institute for Infection and Immunity, University of New South Wales, Sydney, NSW, Australia.
Craig ME; School of Women's and Children's Health, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia.; Virology Research Laboratory, Serology and Virology Division (SAViD), NSW Health Pathology, Prince of Wales Hospital, Sydney, NSW, Australia.; Institute of Endocrinology and Diabetes, The Children's Hospital At Westmead, Sydney, NSW, Australia.
van Hal SJ; Department of Infectious Diseases and Microbiology, NSW Health Pathology, Royal Prince Alfred Hospital, Sydney, NSW, Australia.; Central Clinical School, University of Sydney, Sydney, NSW, Australia.
Rawlinson WD; School of Women's and Children's Health, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia. .; Virology Research Laboratory, Serology and Virology Division (SAViD), NSW Health Pathology, Prince of Wales Hospital, Sydney, NSW, Australia. .; School of Biotechnology and Biomolecular Sciences, Faculty of Science, University of New South Wales, Sydney, NSW, Australia. .; School of Medical Sciences, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia. .
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Źródło :
Scientific reports [Sci Rep] 2021 Feb 16; Vol. 11 (1), pp. 3934. Date of Electronic Publication: 2021 Feb 16.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Sequence Analysis, DNA*
COVID-19/*diagnosis
COVID-19/*virology
Coinfection/*diagnosis
Coinfection/*virology
SARS-CoV-2/*genetics
Virome/*genetics
Australia/epidemiology ; Coinfection/epidemiology ; Computational Biology ; Genome, Viral ; Humans ; Open Reading Frames/genetics ; Reproducibility of Results ; Whole Genome Sequencing
Czasopismo naukowe
Tytuł :
Sequence three million genomes across Africa.
Autorzy :
Wonkam A
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Źródło :
Nature [Nature] 2021 Feb; Vol. 590 (7845), pp. 209-211.
Typ publikacji :
Journal Article
MeSH Terms :
Genomics*/economics
Genomics*/organization & administration
Sequence Analysis, DNA*/economics
African Continental Ancestry Group/*genetics
Genome, Human/*genetics
Africa/ethnology ; Anemia, Sickle Cell/genetics ; Goals ; Hearing Loss/genetics ; Human Genome Project/economics ; Humans
Czasopismo naukowe
Tytuł :
A pilot study of next generation sequencing-liquid biopsy on cell-free DNA as a novel non-invasive diagnostic tool for Klippel-Trenaunay syndrome.
Autorzy :
Palmieri M; Medical Genetics, 9313University of Siena, Siena, Italy.
Pinto AM; Genetica Medica, 161157Azienda Ospedaliera Universitaria Senese, Siena, Italia.
di Blasio L; 18524Candiolo Cancer Institute FPO-IRCCS, Candiolo, Italy.; Department of Oncology, University of Torino, Torino, Italy.
Currò A; Medical Genetics, 9313University of Siena, Siena, Italy.; Genetica Medica, 161157Azienda Ospedaliera Universitaria Senese, Siena, Italia.
Monica V; 18524Candiolo Cancer Institute FPO-IRCCS, Candiolo, Italy.; Department of Oncology, University of Torino, Torino, Italy.
Sarno LD; Medical Genetics, 9313University of Siena, Siena, Italy.
Doddato G; Medical Genetics, 9313University of Siena, Siena, Italy.; Genetica Medica, 161157Azienda Ospedaliera Universitaria Senese, Siena, Italia.
Baldassarri M; Genetica Medica, 161157Azienda Ospedaliera Universitaria Senese, Siena, Italia.
Frullanti E; Medical Genetics, 9313University of Siena, Siena, Italy.
Giliberti A; Medical Genetics, 9313University of Siena, Siena, Italy.; Genetica Medica, 161157Azienda Ospedaliera Universitaria Senese, Siena, Italia.
Mussolin B; 18524Candiolo Cancer Institute FPO-IRCCS, Candiolo, Italy.
Fallerini C; Medical Genetics, 9313University of Siena, Siena, Italy.; Genetica Medica, 161157Azienda Ospedaliera Universitaria Senese, Siena, Italia.
Molinaro F; Chirurgia Pediatrica, 161157Azienda Ospedaliera Universitaria Senese, Siena, Italia.
Vaghi M; Chirurgia Vascolare, 18550Ospedale Maggiore di Crema, Largo Ugo Dossena, Italy.
Renieri A; Medical Genetics, 9313University of Siena, Siena, Italy.; Genetica Medica, 161157Azienda Ospedaliera Universitaria Senese, Siena, Italia.
Primo L; 18524Candiolo Cancer Institute FPO-IRCCS, Candiolo, Italy.; Department of Oncology, University of Torino, Torino, Italy.
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Źródło :
Vascular [Vascular] 2021 Feb; Vol. 29 (1), pp. 85-91. Date of Electronic Publication: 2020 Jun 26.
Typ publikacji :
Journal Article
MeSH Terms :
High-Throughput Nucleotide Sequencing*
Mosaicism*
Mutation*
Sequence Analysis, DNA*
Cell-Free Nucleic Acids/*genetics
Class I Phosphatidylinositol 3-Kinases/*genetics
DNA/*genetics
Klippel-Trenaunay-Weber Syndrome/*diagnosis
Adult ; Cell-Free Nucleic Acids/blood ; Clinical Decision-Making ; DNA/blood ; Female ; Genetic Markers ; Humans ; Klippel-Trenaunay-Weber Syndrome/blood ; Klippel-Trenaunay-Weber Syndrome/genetics ; Klippel-Trenaunay-Weber Syndrome/therapy ; Liquid Biopsy ; Male ; Middle Aged ; Phenotype ; Pilot Projects ; Predictive Value of Tests ; Prognosis
Czasopismo naukowe
Tytuł :
Comparative Analysis of Genomic Alterations across Castration Sensitive and Castration Resistant Prostate Cancer via Circulating Tumor DNA Sequencing.
Autorzy :
Fan L; Department of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Fei X; Department of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Zhu Y; Department of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Pan J; Department of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Sha J; Department of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Chi C; Department of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Gong Y; Department of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Du X; Department of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Zhou L; Department of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Dong B; Department of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Xue W; Department of Urology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
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Źródło :
The Journal of urology [J Urol] 2021 Feb; Vol. 205 (2), pp. 461-469. Date of Electronic Publication: 2020 Sep 08.
Typ publikacji :
Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Sequence Analysis, DNA*
Circulating Tumor DNA/*blood
Circulating Tumor DNA/*genetics
Prostatic Neoplasms/*blood
Prostatic Neoplasms/*genetics
Aged ; Androgen Antagonists/therapeutic use ; Genomics ; Humans ; Male ; Middle Aged ; Prostatic Neoplasms/drug therapy ; Prostatic Neoplasms, Castration-Resistant/blood ; Prostatic Neoplasms, Castration-Resistant/genetics ; Retrospective Studies
Czasopismo naukowe
Tytuł :
Subtraction-free and bisulfite-free specific sequencing of 5-methylcytosine and its oxidized derivatives at base resolution.
Autorzy :
Liu Y; Ludwig Institute for Cancer Research, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK.; Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK.; Exact Sciences Innovation, Innovation Building, Oxford, OX3 7FZ, UK.
Hu Z; Ovarian Cancer Cell Laboratory, MRC Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, OX3 9DS, UK.; Nuffield Department of Women's & Reproductive Health, University of Oxford, Oxford, OX3 9DU, UK.
Cheng J; Ludwig Institute for Cancer Research, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK.; Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK.
Siejka-Zielińska P; Ludwig Institute for Cancer Research, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK.; Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK.
Chen J; Ludwig Institute for Cancer Research, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK.; Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK.
Inoue M; Ludwig Institute for Cancer Research, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK.; Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK.
Ahmed AA; Ovarian Cancer Cell Laboratory, MRC Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, OX3 9DS, UK.; Nuffield Department of Women's & Reproductive Health, University of Oxford, Oxford, OX3 9DU, UK.
Song CX; Ludwig Institute for Cancer Research, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK. .; Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK. .
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Źródło :
Nature communications [Nat Commun] 2021 Jan 27; Vol. 12 (1), pp. 618. Date of Electronic Publication: 2021 Jan 27.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Sequence Analysis, DNA*
5-Methylcytosine/*metabolism
Sulfites/*metabolism
5-Methylcytosine/analogs & derivatives ; Animals ; Base Sequence ; Mice ; Mouse Embryonic Stem Cells/metabolism ; Oxidation-Reduction ; Pyridines/metabolism
Czasopismo naukowe
Tytuł :
Chromosomal assembly of the Antarctic toothfish ( Dissostichus mawsoni ) genome using third-generation DNA sequencing and Hi-C technology.
Autorzy :
Jae Lee S; College of Life Sciences and Biotechnology, Korea University, Seoul 02841, Republic of Korea.
Kim JH; Division of Polar Life Science, Korea Polar Research Institute, Incheon 21990, Republic of Korea.
Jo E; College of Life Sciences and Biotechnology, Korea University, Seoul 02841, Republic of Korea.; Unit of Research for Practical Application, Korea Polar Research Institute, Incheon 21990, Republic of Korea.
Choi E; College of Life Sciences and Biotechnology, Korea University, Seoul 02841, Republic of Korea.
Kim J; College of Life Sciences and Biotechnology, Korea University, Seoul 02841, Republic of Korea.
Choi SG; National Institute of Fisheries Science (NIFS), Busan 46083, Republic of Korea.
Chung S; National Institute of Fisheries Science (NIFS), Busan 46083, Republic of Korea.
Kim HW; Department of Marine Biology, Pukyong National University, Busan 48513, Republic of Korea. E-mail: .
Park H; College of Life Sciences and Biotechnology, Korea University, Seoul 02841, Republic of Korea. E-mail:.
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Źródło :
Zoological research [Zool Res] 2021 Jan 18; Vol. 42 (1), pp. 124-129.
Typ publikacji :
Letter
MeSH Terms :
DNA/*genetics
Perciformes/*genetics
Sequence Analysis, DNA/*veterinary
Animal Distribution ; Animals ; Genome ; Protein Isoforms/genetics ; Sequence Analysis, DNA/methods
Opinia redakcyjna
Tytuł :
Efficient assembly of nanopore reads via highly accurate and intact error correction.
Autorzy :
Chen Y; State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, #7 Jinsui Road, Tianhe District, Guangzhou, People's Republic of China.
Nie F; School of Information Science and Engineering, Central South University, Changsha, 410083, People's Republic of China.
Xie SQ; Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants, Ministry of Education, Hainan University, Haikou, 570228, People's Republic of China.; Hainan Key Laboratory for Biology of Tropical Ornamental Plant Germplasm, College of Forestry, Hainan University, Haikou, 570228, People's Republic of China.
Zheng YF; State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, #7 Jinsui Road, Tianhe District, Guangzhou, People's Republic of China.
Dai Q; College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310018, People's Republic of China.
Bray T; Oxford Nanopore Technologies, Gosling Building, Edmund Halley Road, Oxford Science Park, Oxford, OX4 4DQ, UK.
Wang YX; College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310018, People's Republic of China.
Xing JF; Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants, Ministry of Education, Hainan University, Haikou, 570228, People's Republic of China.; Hainan Key Laboratory for Biology of Tropical Ornamental Plant Germplasm, College of Forestry, Hainan University, Haikou, 570228, People's Republic of China.
Huang ZJ; School of Marine Sciences, Sun Yat-sen University, Guangzhou, Guangdong, People's Republic of China.; State Key Laboratory of Biocontrol, Sun Yat-sen University, Guangzhou, Guangdong, People's Republic of China.; Southern Marine Sciences and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, Guangdong, People's Republic of China.
Wang DP; Nextomics Biosciences Co., Ltd, Wuhan, People's Republic of China.
He LJ; State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, #7 Jinsui Road, Tianhe District, Guangzhou, People's Republic of China.
Luo F; School of Computing, Clemson University, Clemson, SC, 29634-0974, USA. .
Wang JX; School of Information Science and Engineering, Central South University, Changsha, 410083, People's Republic of China. .; Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha, 410083, China. .
Liu YZ; State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, #7 Jinsui Road, Tianhe District, Guangzhou, People's Republic of China. .; Research Units of Ocular Development and Regeneration, Chinese Academy of Medical Sciences, Beijing, People's Republic of China. .
Xiao CL; State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, #7 Jinsui Road, Tianhe District, Guangzhou, People's Republic of China. .
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Źródło :
Nature communications [Nat Commun] 2021 Jan 04; Vol. 12 (1), pp. 60. Date of Electronic Publication: 2021 Jan 04.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Nanopores*
Sequence Analysis, DNA*
Cell Line ; Chromosomes, Human/genetics ; Genome, Human ; Humans ; Retinoblastoma/genetics ; Software
Czasopismo naukowe
Tytuł :
Web-Based Base Editing Toolkits: BE-Designer and BE-Analyzer.
Autorzy :
Hwang GH; Department of Chemistry, Hanyang University, Seoul, South Korea.; Research Institute for Convergence of Basic Sciences, Hanyang University, Seoul, South Korea.
Bae S; Department of Chemistry, Hanyang University, Seoul, South Korea. .; Research Institute for Convergence of Basic Sciences, Hanyang University, Seoul, South Korea. .
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Źródło :
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2021; Vol. 2189, pp. 81-88.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
CRISPR-Cas Systems*
Gene Editing*
Internet*
Sequence Analysis, DNA*
Software*
Czasopismo naukowe
Tytuł :
An Insight into Oligopeptide Transporter 3 (OPT3) Family Proteins.
Autorzy :
Kurt F; Department of Plant Production and Technologies, Faculty of Applied Sciences, Mus Alparslan University, Mus, Turkey.
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Źródło :
Protein and peptide letters [Protein Pept Lett] 2021; Vol. 28 (1), pp. 43-54.
Typ publikacji :
Journal Article
MeSH Terms :
Sequence Alignment*
Sequence Analysis, DNA*
Membrane Transport Proteins/*genetics
Plant Proteins/*genetics
Plants/*genetics
Membrane Transport Proteins/metabolism ; Plant Proteins/metabolism ; Plants/metabolism
Czasopismo naukowe
Tytuł :
Synthetic Gene Circuit Analysis and Optimization.
Autorzy :
Otero-Muras I; BioProcess Engineering Group, IIM-CSIC, Spanish National Research Council, Vigo, Spain. .
Banga JR; BioProcess Engineering Group, IIM-CSIC, Spanish National Research Council, Vigo, Spain.
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Źródło :
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2021; Vol. 2189, pp. 89-103.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Gene Regulatory Networks*
Genes, Synthetic*
Reading Frames*
Sequence Analysis, DNA*
Synthetic Biology*
Czasopismo naukowe
Tytuł :
Poor performance of DNA barcoding and the impact of RAD loci filtering on the species delimitation of an Iberian ant-eating spider.
Autorzy :
Ortiz D; Department of Botany and Zoology, Faculty of Science, Masaryk University, Brno, Czech Republic. Electronic address: .
Pekár S; Department of Botany and Zoology, Faculty of Science, Masaryk University, Brno, Czech Republic.
Bilat J; Geneva Natural History Museum, Geneva, Switzerland.
Alvarez N; Geneva Natural History Museum, Geneva, Switzerland; Department of Genetics & Evolution, University of Geneva, Geneva, Switzerland.
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Jan; Vol. 154, pp. 106997. Date of Electronic Publication: 2020 Oct 24.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
DNA Barcoding, Taxonomic*
Genetic Loci*
Phylogeny*
Restriction Mapping*
Sequence Analysis, DNA*
Spiders/*genetics
Animals ; Cell Nucleus/genetics ; Cluster Analysis ; Electron Transport Complex IV/genetics ; Genetics, Population ; Genomics ; Geography ; Likelihood Functions ; Mitochondria/genetics ; Species Specificity ; Spiders/classification
Czasopismo naukowe
Tytuł :
Computational Design of Multiplex Oligonucleotide-Based Assays.
Autorzy :
Hendling M; Center for Health & Bioresources, Molecular Diagnostics, Austrian Institute of Technology GmbH, Vienna, Austria. .
Barišić I; Center for Health & Bioresources, Molecular Diagnostics, Austrian Institute of Technology GmbH, Vienna, Austria.
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Źródło :
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2021; Vol. 2189, pp. 19-30.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Algorithms*
Sequence Analysis, DNA*
Software*
Oligonucleotides/*genetics
Czasopismo naukowe
Tytuł :
Efficient phasing and imputation of low-coverage sequencing data using large reference panels.
Autorzy :
Rubinacci S; Department of Computational Biology, University of Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, University of Lausanne, Lausanne, Switzerland.
Ribeiro DM; Department of Computational Biology, University of Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, University of Lausanne, Lausanne, Switzerland.
Hofmeister RJ; Department of Computational Biology, University of Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, University of Lausanne, Lausanne, Switzerland.
Delaneau O; Department of Computational Biology, University of Lausanne, Lausanne, Switzerland. .; Swiss Institute of Bioinformatics, University of Lausanne, Lausanne, Switzerland. .
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Źródło :
Nature genetics [Nat Genet] 2021 Jan; Vol. 53 (1), pp. 120-126. Date of Electronic Publication: 2021 Jan 07.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Sequence Analysis, DNA*
Genome, Human ; Genotype ; Humans ; Likelihood Functions ; Polymorphism, Single Nucleotide/genetics ; Reference Standards
Czasopismo naukowe
Tytuł :
Clonal Analysis of Patient-Derived Samples Using Cellular Barcodes.
Autorzy :
Jacobs S; Department of Ageing Biology and Stem Cells, European Research Institute for the Biology of Ageing (ERIBA), University Medical Center Groningen (UMCG), University of Groningen, Groningen, The Netherlands.
Bystrykh LV; Department of Ageing Biology and Stem Cells, European Research Institute for the Biology of Ageing (ERIBA), University Medical Center Groningen (UMCG), University of Groningen, Groningen, The Netherlands.
Belderbos ME; Department of Ageing Biology and Stem Cells, European Research Institute for the Biology of Ageing (ERIBA), University Medical Center Groningen (UMCG), University of Groningen, Groningen, The Netherlands. .; Princess Máxima Center for Pediatric Oncology, Utrecht, The Netherlands. .
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Źródło :
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2021; Vol. 2185, pp. 317-344.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
DNA Barcoding, Taxonomic*
Gene Library*
Hematopoietic Stem Cells*
Sequence Analysis, DNA*
HEK293 Cells ; Humans
Czasopismo naukowe

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