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Wyszukujesz frazę ""Sequence Homology, Nucleic Acid"" wg kryterium: Temat


Tytuł :
RecA finds homologous DNA by reduced dimensionality search.
Autorzy :
Wiktor J; Department of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Gynnå AH; Department of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Leroy P; Department of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Larsson J; Department of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Coceano G; Department of Applied Physics, Science for Life Laboratory, KTH Royal Institute of Technology, Stockholm, Sweden.
Testa I; Department of Applied Physics, Science for Life Laboratory, KTH Royal Institute of Technology, Stockholm, Sweden.
Elf J; Department of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden. .
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Źródło :
Nature [Nature] 2021 Sep; Vol. 597 (7876), pp. 426-429. Date of Electronic Publication: 2021 Sep 01.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Models, Biological*
Recombinational DNA Repair*
Sequence Homology, Nucleic Acid*
DNA, Bacterial/*metabolism
Escherichia coli/*enzymology
Escherichia coli/*genetics
Rec A Recombinases/*metabolism
DNA Breaks, Double-Stranded ; DNA, Single-Stranded/metabolism ; Time Factors
Czasopismo naukowe
Tytuł :
Characterization of a GlgC homolog from extremely halophilic archaeon Haloarcula japonica.
Autorzy :
Sueda R; School of Life Science and Technology, Tokyo Institute of Technology, Midori-ku, Yokohama, Japan.
Yoshida K; School of Life Science and Technology, Tokyo Institute of Technology, Midori-ku, Yokohama, Japan.
Onodera M; School of Life Science and Technology, Tokyo Institute of Technology, Midori-ku, Yokohama, Japan.
Fukui T; School of Life Science and Technology, Tokyo Institute of Technology, Midori-ku, Yokohama, Japan.
Yatsunami R; School of Life Science and Technology, Tokyo Institute of Technology, Midori-ku, Yokohama, Japan.
Nakamura S; School of Life Science and Technology, Tokyo Institute of Technology, Midori-ku, Yokohama, Japan.; National Institute of Technology, Numazu College, Numazu, Shizuoka, Japan.
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Źródło :
Bioscience, biotechnology, and biochemistry [Biosci Biotechnol Biochem] 2021 May 25; Vol. 85 (6), pp. 1441-1447.
Typ publikacji :
Journal Article
MeSH Terms :
Sequence Homology, Nucleic Acid*
Archaeal Proteins/*genetics
Haloarcula/*genetics
Archaeal Proteins/metabolism ; Glycogen/biosynthesis ; Guanosine Triphosphate/metabolism ; Haloarcula/metabolism ; Operon/genetics
Czasopismo naukowe
Tytuł :
Learning a genome-wide score of human-mouse conservation at the functional genomics level.
Autorzy :
Kwon SB; Bioinformatics Interdepartmental Program, University of California, Los Angeles, CA, USA.; Department of Biological Chemistry, University of California, Los Angeles, CA, USA.
Ernst J; Bioinformatics Interdepartmental Program, University of California, Los Angeles, CA, USA. .; Department of Biological Chemistry, University of California, Los Angeles, CA, USA. .; Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research at University of California, Los Angeles, CA, USA. .; Computer Science Department, University of California, Los Angeles, CA, USA. .; Department of Computational Medicine, University of California, Los Angeles, CA, USA. .; Jonsson Comprehensive Cancer Center, University of California, Los Angeles, CA, USA. .; Molecular Biology Institute, University of California, Los Angeles, CA, USA. .
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Źródło :
Nature communications [Nat Commun] 2021 May 03; Vol. 12 (1), pp. 2495. Date of Electronic Publication: 2021 May 03.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Sequence Homology, Nucleic Acid*
Computational Biology/*methods
DNA/*genetics
Genome, Human/*genetics
Transcriptome/*genetics
Animals ; Epigenomics/methods ; Genomics/methods ; Humans ; Mice ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Identification of a novel NPR1 homolog gene, OsNH5N16, which contributes to broad-spectrum resistance in rice.
Autorzy :
Son S; National Institute of Agricultural Sciences, Rural Development Administration, Jeonju, 54874, Republic of Korea.
Moon SJ; Animal and Plant Quarantine Agency, Junbu Reginal Office, Incheon, 22346, Republic of Korea.
Kim H; National Institute of Agricultural Sciences, Rural Development Administration, Jeonju, 54874, Republic of Korea; Jeongup-si Agricultural Technology Center, Jeongup, 56141, Republic of Korea.
Lee KS; National Institute of Agricultural Sciences, Rural Development Administration, Jeonju, 54874, Republic of Korea.
Park SR; National Institute of Agricultural Sciences, Rural Development Administration, Jeonju, 54874, Republic of Korea. Electronic address: .
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Źródło :
Biochemical and biophysical research communications [Biochem Biophys Res Commun] 2021 Apr 16; Vol. 549, pp. 200-206. Date of Electronic Publication: 2021 Mar 04.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Disease Resistance*
Genes, Plant*
Sequence Homology, Nucleic Acid*
Oryza/*genetics
Oryza/*microbiology
Plant Diseases/*microbiology
Plant Proteins/*metabolism
Amino Acid Sequence ; Fusarium/physiology ; Gene Expression Regulation, Plant ; Plant Proteins/chemistry ; Plant Proteins/genetics ; Promoter Regions, Genetic/genetics ; Salicylic Acid/pharmacology ; Transcription, Genetic ; Up-Regulation/genetics ; Xanthomonas/physiology
SCR Organism :
Fusarium fujikuroi; Xanthomonas oryzae
Czasopismo naukowe
Tytuł :
OrthoDB in 2020: evolutionary and functional annotations of orthologs.
Autorzy :
Zdobnov EM; Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland.
Kuznetsov D; Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland.
Tegenfeldt F; Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland.
Manni M; Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland.
Berkeley M; Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland.
Kriventseva EV; Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2021 Jan 08; Vol. 49 (D1), pp. D389-D393.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Databases, Genetic*
Evolution, Molecular*
Molecular Sequence Annotation*
Sequence Homology, Nucleic Acid*
Animals ; Software ; User-Computer Interface
Czasopismo naukowe
Tytuł :
Many, but not all, lineage-specific genes can be explained by homology detection failure.
Autorzy :
Weisman CM; Department of Molecular & Cellular Biology, Harvard University, Cambridge, Massachusetts, United States of America.
Murray AW; Department of Molecular & Cellular Biology, Harvard University, Cambridge, Massachusetts, United States of America.
Eddy SR; Department of Molecular & Cellular Biology, Harvard University, Cambridge, Massachusetts, United States of America.; Howard Hughes Medical Institute, Harvard University, Cambridge, Massachusetts, United States of America.; John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts, United States of America.
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Źródło :
PLoS biology [PLoS Biol] 2020 Nov 02; Vol. 18 (11), pp. e3000862. Date of Electronic Publication: 2020 Nov 02 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Sequence Homology, Nucleic Acid*
Sequence Analysis, DNA/*methods
Algorithms ; Biological Evolution ; Evolution, Molecular ; Genes, Fungal/genetics ; Genes, Insect/genetics ; Models, Genetic ; Phylogeny ; Species Specificity ; Structural Homology, Protein
Czasopismo naukowe
Tytuł :
AGO CLIP-based imputation of potent siRNA sequences targeting SARS-CoV-2 with antifibrotic miRNA-like activity.
Autorzy :
Ahn SH; Department of Life Sciences, Korea University, Seoul, Korea.
Gu D; Department of Life Sciences, Korea University, Seoul, Korea.
Koh Y; Division of Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul, Korea.
Lee HS; Department of Life Sciences, Korea University, Seoul, Korea.
Chi SW; Department of Life Sciences, Korea University, Seoul, Korea. .
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Źródło :
Scientific reports [Sci Rep] 2021 Sep 27; Vol. 11 (1), pp. 19161. Date of Electronic Publication: 2021 Sep 27.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Argonaute Proteins/*genetics
COVID-19/*prevention & control
MicroRNAs/*genetics
RNA, Small Interfering/*genetics
SARS-CoV-2/*genetics
A549 Cells ; Argonaute Proteins/metabolism ; Base Sequence ; Binding Sites/genetics ; COVID-19/virology ; Cell Line ; Coronavirus RNA-Dependent RNA Polymerase/genetics ; Coronavirus RNA-Dependent RNA Polymerase/metabolism ; Gene Expression Profiling/methods ; HeLa Cells ; Humans ; Pulmonary Fibrosis/genetics ; Pulmonary Fibrosis/metabolism ; RNA Interference ; RNA-Seq/methods ; SARS-CoV-2/physiology ; Sequence Homology, Nucleic Acid
Czasopismo naukowe
Tytuł :
Spatial regulation by multiple Gremlin1 enhancers provides digit development with cis-regulatory robustness and evolutionary plasticity.
Autorzy :
Malkmus J; Developmental Genetics, Department of Biomedicine, University of Basel, Basel, Switzerland.
Ramos Martins L; Developmental Genetics, Department of Biomedicine, University of Basel, Basel, Switzerland.
Jhanwar S; Developmental Genetics, Department of Biomedicine, University of Basel, Basel, Switzerland.; Swiss Institute for Bioinformatics, University of Basel, Basel, Switzerland.
Kircher B; Department of Biology, University of Florida, Gainesville, FL, USA.
Palacio V; Developmental Genetics, Department of Biomedicine, University of Basel, Basel, Switzerland.
Sheth R; Developmental Genetics, Department of Biomedicine, University of Basel, Basel, Switzerland.
Leal F; Department of Biology, University of Florida, Gainesville, FL, USA.
Duchesne A; Université Paris-Saclay, INRAE, AgroParisTech, GABI, Jouy-en-Josas, France.
Lopez-Rios J; Development and Evolution, Centro Andaluz de Biología del Desarrollo, CSIC-Universidad Pablo de Olavide-Junta de Andalucía, Seville, Spain.
Peterson KA; The Jackson Laboratory, Bar Harbor, ME, USA.
Reinhardt R; Developmental Genetics, Department of Biomedicine, University of Basel, Basel, Switzerland.
Onimaru K; Laboratory for Bioinformatics Research, RIKEN BDR, Wako City, Saitama, Japan.
Cohn MJ; Department of Biology, University of Florida, Gainesville, FL, USA.; Department of Molecular Genetics and Microbiology, Genetics Institute, University of Florida, Gainesville, FL, USA.
Zuniga A; Developmental Genetics, Department of Biomedicine, University of Basel, Basel, Switzerland. .
Zeller R; Developmental Genetics, Department of Biomedicine, University of Basel, Basel, Switzerland. .
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Źródło :
Nature communications [Nat Commun] 2021 Sep 21; Vol. 12 (1), pp. 5557. Date of Electronic Publication: 2021 Sep 21.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Enhancer Elements, Genetic*
Gene Expression Regulation, Developmental*
Animal Fins/*metabolism
Intercellular Signaling Peptides and Proteins/*genetics
Limb Buds/*metabolism
Animal Fins/cytology ; Animal Fins/growth & development ; Animals ; Base Sequence ; Biological Evolution ; Boidae ; Cattle ; Chickens ; Embryo, Mammalian ; Embryo, Nonmammalian ; Iguanas ; Intercellular Signaling Peptides and Proteins/metabolism ; Limb Buds/cytology ; Limb Buds/growth & development ; Mice ; Mice, Transgenic ; Phylogeny ; Protein Isoforms/genetics ; Protein Isoforms/metabolism ; Rabbits ; Reverse Genetics/methods ; Sequence Alignment ; Sequence Homology, Nucleic Acid ; Sharks ; Signal Transduction ; Swine
Czasopismo naukowe
Tytuł :
Comparative study of predicted miRNA between Indonesia and China (Wuhan) SARS-CoV-2: a bioinformatics analysis.
Autorzy :
Rahmadi A; Faculty of Medicine, Universitas Muhammadiyah Prof. DR. Hamka, Jakarta, 12130, Indonesia.
Fasyah I; Faculty of Medicine, Universitas Muhammadiyah Prof. DR. Hamka, Jakarta, 12130, Indonesia.
Sudigyo D; Bioinformatics and Data Science Research Center, Bina Nusantara University, Jakarta, 11480, Indonesia. .
Budiarto A; Bioinformatics and Data Science Research Center, Bina Nusantara University, Jakarta, 11480, Indonesia.; School of Computer Science, Bina Nusantara University, Jakarta, 11480, Indonesia.
Mahesworo B; Bioinformatics and Data Science Research Center, Bina Nusantara University, Jakarta, 11480, Indonesia.
Hidayat AA; Bioinformatics and Data Science Research Center, Bina Nusantara University, Jakarta, 11480, Indonesia.
Pardamean B; Bioinformatics and Data Science Research Center, Bina Nusantara University, Jakarta, 11480, Indonesia.; BINUS Graduate Program-Master of Computer Science Program, Bina Nusantara University, Jakarta, 11480, Indonesia.
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Źródło :
Genes & genomics [Genes Genomics] 2021 Sep; Vol. 43 (9), pp. 1079-1086. Date of Electronic Publication: 2021 Jun 21.
Typ publikacji :
Journal Article
MeSH Terms :
COVID-19/*genetics
MicroRNAs/*genetics
SARS-CoV-2/*genetics
COVID-19/epidemiology ; COVID-19/virology ; China ; Humans ; Indonesia ; SARS-CoV-2/pathogenicity ; Sequence Homology, Nucleic Acid
Czasopismo naukowe
Tytuł :
Comparison of SARS-CoV-2 N gene real-time RT-PCR targets and commercially available mastermixes.
Autorzy :
Brown JR; Microbiology, Virology and Infection Prevention and Control, Great Ormond Street Hospital for Children NHS Foundation Trust, London, United Kingdom. Electronic address: .
O'Sullivan DM; National Measurement Laboratory at LGC, Teddington, United Kingdom.
Shah D; Microbiology, Virology and Infection Prevention and Control, Great Ormond Street Hospital for Children NHS Foundation Trust, London, United Kingdom.
Atkinson L; Microbiology, Virology and Infection Prevention and Control, Great Ormond Street Hospital for Children NHS Foundation Trust, London, United Kingdom.
Pereira RPA; National Measurement Laboratory at LGC, Teddington, United Kingdom.
Whale AS; National Measurement Laboratory at LGC, Teddington, United Kingdom.
Busby EJ; National Measurement Laboratory at LGC, Teddington, United Kingdom.
Huggett JF; National Measurement Laboratory at LGC, Teddington, United Kingdom; School of Biosciences & Medicine, Faculty of Health & Medical Sciences, University of Surrey, United Kingdom.
Harris K; Microbiology, Virology and Infection Prevention and Control, Great Ormond Street Hospital for Children NHS Foundation Trust, London, United Kingdom.
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Źródło :
Journal of virological methods [J Virol Methods] 2021 Sep; Vol. 295, pp. 114215. Date of Electronic Publication: 2021 Jun 21.
Typ publikacji :
Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
COVID-19 Nucleic Acid Testing/*methods
Coronavirus Nucleocapsid Proteins/*genetics
SARS-CoV-2/*isolation & purification
COVID-19/diagnosis ; COVID-19 Nucleic Acid Testing/instrumentation ; DNA Primers/genetics ; Humans ; Nose/virology ; Pharynx/virology ; Phosphoproteins/genetics ; RNA, Viral/genetics ; Reagent Kits, Diagnostic ; Real-Time Polymerase Chain Reaction ; Reverse Transcriptase Polymerase Chain Reaction ; SARS-CoV-2/genetics ; Sensitivity and Specificity ; Sequence Homology, Nucleic Acid
Czasopismo naukowe
Tytuł :
No species-level losses of s2m suggests critical role in replication of SARS-related coronaviruses.
Autorzy :
Gilbert C; Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France.
Tengs T; Section of Molecular Toxicology, Department of Environmental Health, Norwegian Institute of Public Health, Oslo, Norway. .
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Źródło :
Scientific reports [Sci Rep] 2021 Aug 09; Vol. 11 (1), pp. 16145. Date of Electronic Publication: 2021 Aug 09.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Coronaviridae/*genetics
Interspersed Repetitive Sequences/*genetics
RNA, Viral/*genetics
SARS-CoV-2/*genetics
Virus Replication/*genetics
Animals ; Base Sequence ; COVID-19/virology ; Coronaviridae/classification ; Evolution, Molecular ; Gene Transfer, Horizontal ; Humans ; Phylogeny ; SARS-CoV-2/physiology ; Sequence Homology, Nucleic Acid ; Species Specificity
Czasopismo naukowe
Tytuł :
Molecular characterization of a novel partitivirus and a fusarivirus coinfecting the fungus Nigrospora sphaerica.
Autorzy :
Zhong J; Department of Plant Protection, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.; Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, Hunan Agricultural University, Nongda Road 1, Furong District, Changsha City, Hunan Province, 410128, People's Republic of China.
Yang ZZ; Department of Plant Protection, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Yang X; Department of Plant Protection, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Guo ZJ; Department of Plant Protection, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Xie W; Department of Plant Protection, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Zhang YJ; Department of Plant Protection, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, 100081, China. .
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Źródło :
Archives of virology [Arch Virol] 2021 Aug; Vol. 166 (8), pp. 2325-2331. Date of Electronic Publication: 2021 May 31.
Typ publikacji :
Journal Article
MeSH Terms :
Ascomycota/*virology
Fungal Viruses/*classification
Whole Genome Sequencing/*methods
Fungal Viruses/genetics ; Fungal Viruses/isolation & purification ; Genome Size ; Genome, Viral ; Open Reading Frames ; Phylogeny ; Plant Diseases/microbiology ; Sequence Homology, Nucleic Acid
SCR Organism :
Nigrospora sphaerica
Czasopismo naukowe
Tytuł :
Molecular dissection of two homoeologous wheat genes encoding RING H2-type E3 ligases: TaSIRFP-3A and TaSIRFP-3B.
Autorzy :
Park YC; Plant Genomics Lab, Department of Bio-Resources Sciences, Kangwon National University, Chuncheon, 24341, Republic of Korea.
Jang CS; Plant Genomics Lab, Department of Bio-Resources Sciences, Kangwon National University, Chuncheon, 24341, Republic of Korea. .
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Źródło :
Planta [Planta] 2020 Jul 21; Vol. 252 (2), pp. 26. Date of Electronic Publication: 2020 Jul 21.
Typ publikacji :
Journal Article
MeSH Terms :
Genes, Plant*
Sequence Homology, Nucleic Acid*
Plant Proteins/*genetics
Triticum/*enzymology
Triticum/*genetics
Ubiquitin-Protein Ligases/*genetics
Arabidopsis/drug effects ; Arabidopsis/genetics ; Arabidopsis/growth & development ; Cold Temperature ; Gene Expression Regulation, Plant/drug effects ; Germination/drug effects ; Glucosyltransferases/metabolism ; Plant Development/drug effects ; Plant Leaves/drug effects ; Plant Leaves/physiology ; Plant Proteins/metabolism ; Plants, Genetically Modified ; Proteasome Endopeptidase Complex/metabolism ; Protein Binding/drug effects ; Proteolysis/drug effects ; Sucrose/pharmacology ; Triticum/drug effects ; Ubiquitin-Protein Ligases/metabolism ; Ubiquitination/drug effects
Czasopismo naukowe
Tytuł :
Identifying SARS-CoV-2-related coronaviruses in Malayan pangolins.
Autorzy :
Lam TT; Joint Institute of Virology (Shantou University and The University of Hong Kong), Guangdong-Hongkong Joint Laboratory of Emerging Infectious Diseases, Shantou University, Shantou, P. R. China.; State Key Laboratory of Emerging Infectious Diseases, School of Public Health, The University of Hong Kong, Hong Kong, P. R. China.
Jia N; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, P. R. China.
Zhang YW; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, P. R. China.
Shum MH; State Key Laboratory of Emerging Infectious Diseases, School of Public Health, The University of Hong Kong, Hong Kong, P. R. China.
Jiang JF; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, P. R. China.
Zhu HC; Joint Institute of Virology (Shantou University and The University of Hong Kong), Guangdong-Hongkong Joint Laboratory of Emerging Infectious Diseases, Shantou University, Shantou, P. R. China.; State Key Laboratory of Emerging Infectious Diseases, School of Public Health, The University of Hong Kong, Hong Kong, P. R. China.
Tong YG; Beijing Advanced Innovation Center for Soft Matter Science and Engineering (BAIC-SM), College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, P. R. China.
Shi YX; Guangzhou Customs Technology Center, Guangzhou, P. R. China.
Ni XB; State Key Laboratory of Emerging Infectious Diseases, School of Public Health, The University of Hong Kong, Hong Kong, P. R. China.
Liao YS; State Key Laboratory of Emerging Infectious Diseases, School of Public Health, The University of Hong Kong, Hong Kong, P. R. China.
Li WJ; Beijing Advanced Innovation Center for Soft Matter Science and Engineering (BAIC-SM), College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, P. R. China.
Jiang BG; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, P. R. China.
Wei W; Life Sciences Institute, Guangxi Medical University, Nanning, P. R. China.
Yuan TT; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, P. R. China.
Zheng K; Guangzhou Customs Technology Center, Guangzhou, P. R. China.
Cui XM; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, P. R. China.
Li J; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, P. R. China.
Pei GQ; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, P. R. China.
Qiang X; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, P. R. China.
Cheung WY; State Key Laboratory of Emerging Infectious Diseases, School of Public Health, The University of Hong Kong, Hong Kong, P. R. China.
Li LF; School of Information and Management, Guangxi Medical University, Nanning, P. R. China.
Sun FF; Guangzhou Customs Technology Center, Guangzhou, P. R. China.
Qin S; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, P. R. China.
Huang JC; Guangzhou Customs Technology Center, Guangzhou, P. R. China.
Leung GM; State Key Laboratory of Emerging Infectious Diseases, School of Public Health, The University of Hong Kong, Hong Kong, P. R. China.
Holmes EC; Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences and School of Medical Sciences, The University of Sydney, Sydney, New South Wales, Australia.
Hu YL; Life Sciences Institute, Guangxi Medical University, Nanning, P. R. China. .; Center for Genomic and Personalized Medicine, Guangxi Medical University, Nanning, P. R. China. .
Guan Y; Joint Institute of Virology (Shantou University and The University of Hong Kong), Guangdong-Hongkong Joint Laboratory of Emerging Infectious Diseases, Shantou University, Shantou, P. R. China. .; State Key Laboratory of Emerging Infectious Diseases, School of Public Health, The University of Hong Kong, Hong Kong, P. R. China. .
Cao WC; State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, P. R. China. .
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Źródło :
Nature [Nature] 2020 Jul; Vol. 583 (7815), pp. 282-285. Date of Electronic Publication: 2020 Mar 26.
Typ publikacji :
Comparative Study; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Evolution, Molecular*
Sequence Homology, Nucleic Acid*
Betacoronavirus/*genetics
Betacoronavirus/*isolation & purification
Eutheria/*virology
Genome, Viral/*genetics
Amino Acid Sequence ; Animals ; Betacoronavirus/chemistry ; Betacoronavirus/classification ; COVID-19 ; China/epidemiology ; Chiroptera/virology ; Coronavirus Infections/epidemiology ; Coronavirus Infections/transmission ; Coronavirus Infections/virology ; Disease Reservoirs/virology ; Genomics ; Humans ; Malaysia ; Pandemics ; Phylogeny ; Pneumonia, Viral/epidemiology ; Pneumonia, Viral/transmission ; Pneumonia, Viral/virology ; Recombination, Genetic ; SARS-CoV-2 ; Sequence Alignment ; Spike Glycoprotein, Coronavirus/chemistry ; Spike Glycoprotein, Coronavirus/genetics ; Zoonoses/virology
Czasopismo naukowe
Tytuł :
Isolation of SARS-CoV-2-related coronavirus from Malayan pangolins.
Autorzy :
Xiao K; Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou, China.; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China.
Zhai J; Guangzhou Zoo & Guangzhou Wildlife Research Center, Guangzhou, China.
Feng Y; Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou, China.; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China.
Zhou N; Guangzhou Zoo & Guangzhou Wildlife Research Center, Guangzhou, China.
Zhang X; Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou, China.; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China.
Zou JJ; Guangdong Provincial Wildlife Rescue Center, Guangzhou, China.
Li N; Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou, China.; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China.
Guo Y; Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou, China.; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China.
Li X; Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Shen X; Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Zhang Z; Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Shu F; Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou, China.; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China.
Huang W; Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou, China.; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China.
Li Y; State Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing, China.
Zhang Z; State Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing, China.
Chen RA; Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou, China.; Zhaoqing Branch Center of Guangdong Laboratory for Lingnan Modern Agricultural Science and Technology, Zhaoqing, China.
Wu YJ; Guangzhou Zoo & Guangzhou Wildlife Research Center, Guangzhou, China.
Peng SM; Guangzhou Zoo & Guangzhou Wildlife Research Center, Guangzhou, China.
Huang M; Guangzhou Zoo & Guangzhou Wildlife Research Center, Guangzhou, China.
Xie WJ; Guangzhou Zoo & Guangzhou Wildlife Research Center, Guangzhou, China.
Cai QH; Guangzhou Zoo & Guangzhou Wildlife Research Center, Guangzhou, China.
Hou FH; Guangdong Provincial Wildlife Rescue Center, Guangzhou, China.
Chen W; Guangzhou Zoo & Guangzhou Wildlife Research Center, Guangzhou, China. .
Xiao L; Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou, China. .; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China. .
Shen Y; Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou, China. .; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, China. .
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Źródło :
Nature [Nature] 2020 Jul; Vol. 583 (7815), pp. 286-289. Date of Electronic Publication: 2020 May 07.
Typ publikacji :
Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Evolution, Molecular*
Sequence Homology, Nucleic Acid*
Betacoronavirus/*genetics
Betacoronavirus/*isolation & purification
Eutheria/*virology
Genome, Viral/*genetics
Animals ; Betacoronavirus/classification ; COVID-19 ; China ; Chiroptera/virology ; Chlorocebus aethiops ; Coronavirus Envelope Proteins ; Coronavirus Infections/epidemiology ; Coronavirus Infections/pathology ; Coronavirus Infections/transmission ; Coronavirus Infections/veterinary ; Coronavirus Infections/virology ; Coronavirus M Proteins ; Coronavirus Nucleocapsid Proteins ; Disease Reservoirs/virology ; Genomics ; Host Specificity ; Humans ; Lung/pathology ; Lung/virology ; Malaysia ; Nucleocapsid Proteins/genetics ; Pandemics ; Phosphoproteins ; Phylogeny ; Pneumonia, Viral/epidemiology ; Pneumonia, Viral/transmission ; Pneumonia, Viral/virology ; Polymerase Chain Reaction ; Recombination, Genetic ; SARS-CoV-2 ; Sequence Alignment ; Sequence Analysis, RNA ; Spike Glycoprotein, Coronavirus/genetics ; Vero Cells ; Viral Envelope Proteins/genetics ; Viral Matrix Proteins/genetics ; Zoonoses/transmission ; Zoonoses/virology
Czasopismo naukowe
Tytuł :
Homeologs of Brassica SOC1, a central regulator of flowering time, are differentially regulated due to partitioning of evolutionarily conserved transcription factor binding sites in promoters.
Autorzy :
Sri T; Department of Biotechnology, TERI School of Advanced Studies, 10, Institutional Area, Vasant Kunj, New Delhi 110070, India.
Gupta B; Department of Biotechnology, TERI School of Advanced Studies, 10, Institutional Area, Vasant Kunj, New Delhi 110070, India.
Tyagi S; Department of Biotechnology, TERI School of Advanced Studies, 10, Institutional Area, Vasant Kunj, New Delhi 110070, India.
Singh A; Department of Biotechnology, TERI School of Advanced Studies, 10, Institutional Area, Vasant Kunj, New Delhi 110070, India. Electronic address: .
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2020 Jun; Vol. 147, pp. 106777. Date of Electronic Publication: 2020 Feb 29.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Conserved Sequence*/genetics
Evolution, Molecular*
Gene Expression Regulation, Plant*
Sequence Homology, Nucleic Acid*
Brassica/*genetics
Flowers/*genetics
Plant Proteins/*genetics
Transcription Factors/*metabolism
Base Sequence ; Binding Sites ; Brassica/metabolism ; DNA Copy Number Variations/genetics ; Genes, Reporter ; Phylogeny ; Polyploidy ; Promoter Regions, Genetic ; Protein Binding ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Time Factors
Czasopismo naukowe
Tytuł :
Functional identification and characterization of IpMSTNa, a novel orthologous myostatin (MSTN) gene in channel catfish Ictalurus punctatus.
Autorzy :
Zhang S; Freshwater Fisheries Research Institute of Jiangsu Province, Nanjing 210017, China; BGI Education Center, University of Chinese Academy of Sciences, Shenzhen 518083, China; The Jiangsu Provincial Platform for Conservation and Utilization of Agricultural Germplasm, Nanjing 210014, China.
Li Y; Nanjing Brain Hospital affiliated to Nanjing Medical University, Nanjing 210029, China.
Shao J; Freshwater Fisheries Research Institute of Jiangsu Province, Nanjing 210017, China.
Liu H; Freshwater Fisheries Research Institute of Jiangsu Province, Nanjing 210017, China.
Wang J; Freshwater Fisheries Research Institute of Jiangsu Province, Nanjing 210017, China.
Wang M; Freshwater Fisheries Research Institute of Jiangsu Province, Nanjing 210017, China; The Jiangsu Provincial Platform for Conservation and Utilization of Agricultural Germplasm, Nanjing 210014, China.
Chen X; Freshwater Fisheries Research Institute of Jiangsu Province, Nanjing 210017, China; The Jiangsu Provincial Platform for Conservation and Utilization of Agricultural Germplasm, Nanjing 210014, China. Electronic address: .
Bian W; Freshwater Fisheries Research Institute of Jiangsu Province, Nanjing 210017, China; The Jiangsu Provincial Platform for Conservation and Utilization of Agricultural Germplasm, Nanjing 210014, China. Electronic address: .
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Źródło :
International journal of biological macromolecules [Int J Biol Macromol] 2020 Jun 01; Vol. 152, pp. 1-10. Date of Electronic Publication: 2020 Feb 08.
Typ publikacji :
Journal Article
MeSH Terms :
Sequence Homology, Nucleic Acid*
Ictaluridae/*genetics
Myostatin/*genetics
Amino Acid Sequence ; Animals ; Base Sequence ; Gene Expression Regulation, Developmental ; Genomics ; Humans ; Ictaluridae/growth & development ; Models, Molecular ; Myostatin/chemistry ; Myostatin/metabolism ; Organ Specificity ; Protein Conformation, alpha-Helical
Czasopismo naukowe
Tytuł :
Reconstructing phylogenetic relationships based on repeat sequence similarities.
Autorzy :
Vitales D; Institut Botànic de Barcelona (IBB, CSIC-Ajuntament de Barcelona), Barcelona, Catalonia, Spain; Laboratori de Botànica (UB) - Unitat associada al CSIC, Facultat de Farmàcia i Ciències de l'Alimentació, Universitat de Barcelona, Av. Joan XXIII 27-31, 08028 Barcelona, Catalonia, Spain. Electronic address: .
Garcia S; Institut Botànic de Barcelona (IBB, CSIC-Ajuntament de Barcelona), Barcelona, Catalonia, Spain.
Dodsworth S; School of Life Sciences, University of Bedfordshire, Luton, United Kingdom.
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2020 Jun; Vol. 147, pp. 106766. Date of Electronic Publication: 2020 Feb 28.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeny*
Sequence Homology, Nucleic Acid*
Repetitive Sequences, Nucleic Acid/*genetics
Animals ; Databases, Genetic ; Evolution, Molecular ; Genetic Markers ; Magnoliopsida/genetics ; Species Specificity
Czasopismo naukowe
Tytuł :
Positional Correlation Natural Vector: A Novel Method for Genome Comparison.
Autorzy :
He L; Department of Mathematical Sciences, Tsinghua University, Beijing 100084, China.
Dong R; Department of Mathematical Sciences, Tsinghua University, Beijing 100084, China.
He RL; Department of Biological Sciences, Chicago State University, Chicago, IL 60628, USA.
Yau SS; Department of Mathematical Sciences, Tsinghua University, Beijing 100084, China.
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Źródło :
International journal of molecular sciences [Int J Mol Sci] 2020 May 29; Vol. 21 (11). Date of Electronic Publication: 2020 May 29.
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeny*
Sequence Homology, Nucleic Acid*
Sequence Analysis, DNA/*methods
Algorithms ; Genome, Bacterial ; Genome, Viral ; Sequence Alignment
Czasopismo naukowe
Tytuł :
Vestiges of the Bacterial Signal Recognition Particle-Based Protein Targeting in Mitochondria.
Autorzy :
Pyrih J; Institute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice (Budweis), Czech Republic.; Laboratory of Molecular and Evolutionary Parasitology, RAPID Group, School of Biosciences, University of Kent, Canterbury, United Kingdom.
Pánek T; Department of Biology and Ecology, Faculty of Science, University of Ostrava, Ostrava, Czech Republic.; Department of Zoology, Faculty of Science, Charles University, Prague, Czech Republic.
Durante IM; Institute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice (Budweis), Czech Republic.
Rašková V; Institute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice (Budweis), Czech Republic.; Faculty of Sciences, University of South Bohemia, České Budějovice (Budweis), Czech Republic.
Cimrhanzlová K; Institute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice (Budweis), Czech Republic.; Faculty of Sciences, University of South Bohemia, České Budějovice (Budweis), Czech Republic.
Kriegová E; Institute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice (Budweis), Czech Republic.
Tsaousis AD; Laboratory of Molecular and Evolutionary Parasitology, RAPID Group, School of Biosciences, University of Kent, Canterbury, United Kingdom.
Eliáš M; Department of Biology and Ecology, Faculty of Science, University of Ostrava, Ostrava, Czech Republic.
Lukeš J; Institute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice (Budweis), Czech Republic.; Faculty of Sciences, University of South Bohemia, České Budějovice (Budweis), Czech Republic.
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Źródło :
Molecular biology and evolution [Mol Biol Evol] 2021 Jul 29; Vol. 38 (8), pp. 3170-3187.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Biological Evolution*
Genome, Mitochondrial*
Bacterial Proteins/*genetics
Escherichia coli Proteins/*genetics
Naegleria/*genetics
Receptors, Cytoplasmic and Nuclear/*genetics
Signal Recognition Particle/*genetics
Sequence Homology, Nucleic Acid
Czasopismo naukowe

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