Temat: "Sequence Homology, Nucleic Acid" - OpacWWW

Skocz do pozycji: 1.

Tytuł:: Many, but not all, lineage-specific genes can be explained by homology detection failure.
Autorzy:: Weisman CM; Department of Molecular & Cellular Biology, Harvard University, Cambridge, Massachusetts, United States of America.
Murray AW; Department of Molecular & Cellular Biology, Harvard University, Cambridge, Massachusetts, United States of America.
Eddy SR; Department of Molecular & Cellular Biology, Harvard University, Cambridge, Massachusetts, United States of America.; Howard Hughes Medical Institute, Harvard University, Cambridge, Massachusetts, United States of America.; John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts, United States of America.; Pokaż więcej
Źródło:: PLoS biology [PLoS Biol] 2020 Nov 02; Vol. 18 (11), pp. e3000862. Date of Electronic Publication: 2020 Nov 02 (Print Publication: 2020).
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Sequence Homology, Nucleic Acid*
Sequence Analysis, DNA/*methods
Algorithms ; Biological Evolution ; Evolution, Molecular ; Genes, Fungal/genetics ; Genes, Insect/genetics ; Models, Genetic ; Phylogeny ; Species Specificity ; Structural Homology, Protein

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Skocz do pozycji: 2.

Tytuł:: Positional Correlation Natural Vector: A Novel Method for Genome Comparison.
Autorzy:: He L; Department of Mathematical Sciences, Tsinghua University, Beijing 100084, China.
Dong R; Department of Mathematical Sciences, Tsinghua University, Beijing 100084, China.
He RL; Department of Biological Sciences, Chicago State University, Chicago, IL 60628, USA.
Yau SS; Department of Mathematical Sciences, Tsinghua University, Beijing 100084, China.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2020 May 29; Vol. 21 (11). Date of Electronic Publication: 2020 May 29.
Typ publikacji:: Journal Article
MeSH Terms:: Phylogeny*
Sequence Homology, Nucleic Acid*
Sequence Analysis, DNA/*methods
Algorithms ; Genome, Bacterial ; Genome, Viral ; Sequence Alignment

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Skocz do pozycji: 3.

Tytuł:: RNAmountAlign: Efficient software for local, global, semiglobal pairwise and multiple RNA sequence/structure alignment.
Autorzy:: Bayegan AH; Biology Department, Boston College, Chestnut Hill, MA, United States of America.
Clote P; Biology Department, Boston College, Chestnut Hill, MA, United States of America.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2020 Jan 24; Vol. 15 (1), pp. e0227177. Date of Electronic Publication: 2020 Jan 24 (Print Publication: 2020).
Typ publikacji:: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Sequence Alignment*
Sequence Homology, Nucleic Acid*
Software*
Base Sequence/*genetics
Algorithms ; Data Accuracy ; Humans ; Models, Statistical ; Nucleic Acid Conformation ; Probability ; Sequence Analysis, RNA ; Time Factors

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Skocz do pozycji: 4.

Tytuł:: A Genetic Screen for Genes That Impact Peroxisomes in Drosophila Identifies Candidate Genes for Human Disease.
Autorzy:: Graves HK; Department of Molecular and Human Genetics.
Jangam S; Department of Molecular and Human Genetics.
Tan KL; Department of Molecular and Human Genetics.
Pignata A; Department of Molecular and Human Genetics.
Seto ES; Department of Molecular and Human Genetics.
Yamamoto S; Department of Molecular and Human Genetics, .; Department of Neuroscience.; Program in Developmental Biology, Baylor College of Medicine, Houston, TX 77030, and.; Jan and Dan Duncan Neurological Research Institute, Texas Children Hospital, Houston, TX 77030.
Wangler MF; Department of Molecular and Human Genetics, .; Program in Developmental Biology, Baylor College of Medicine, Houston, TX 77030, and.; Jan and Dan Duncan Neurological Research Institute, Texas Children Hospital, Houston, TX 77030.; Pokaż więcej
Źródło:: G3 (Bethesda, Md.) [G3 (Bethesda)] 2020 Jan 07; Vol. 10 (1), pp. 69-77. Date of Electronic Publication: 2020 Jan 07.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Genes, Insect*
Sequence Homology, Nucleic Acid*
Peroxisomes/*genetics
Zellweger Syndrome/*genetics
Animals ; Drosophila melanogaster ; Humans ; Mutation ; Peroxisomes/pathology ; X Chromosome/genetics

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Skocz do pozycji: 5.

Tytuł:: Misidentification of MLL3 and other mutations in cancer due to highly homologous genomic regions.
Autorzy:: Bowler TG; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Pradhan K; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Kong Y; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Bartenstein M; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Morrone KA; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Sridharan A; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Kessel RM; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Shastri A; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Giricz O; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Bhagat TD; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Gordon-Mitchell S; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Rohanizadegan M; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Hooda L; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Datt I; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Przychodzen BP; Cleveland Clinic, Cleveland, OH, USA.
Parmar S; MD Anderson Cancer Center, Houston, TX, USA.
Maqbool S; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Maciejewski JP; Cleveland Clinic, Cleveland, OH, USA.
Steidl U; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Greally JM; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.
Verma A; Albert Einstein College of Medicine, Montefiore Medical Center, Bronx, NY, USA.; Pokaż więcej
Źródło:: Leukemia & lymphoma [Leuk Lymphoma] 2019 Dec; Vol. 60 (13), pp. 3132-3137. Date of Electronic Publication: 2019 Jul 10.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Sequence Homology, Nucleic Acid*
DNA Mutational Analysis/*statistics & numerical data
DNA-Binding Proteins/*genetics
Databases, Genetic/*statistics & numerical data
Leukemia, Myeloid, Acute/*genetics
Algorithms ; Chromosome Mapping/methods ; Exons/genetics ; False Positive Reactions ; High-Throughput Nucleotide Sequencing ; Humans ; Leukemia, Myeloid, Acute/diagnosis ; Pseudogenes/genetics ; Exome Sequencing/statistics & numerical data

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Skocz do pozycji: 6.

Tytuł:: Knockout of Babesia bovis rad51 ortholog and its complementation by expression from the BbACc3 artificial chromosome platform.
Autorzy:: Mack EA; Department of Infectious Diseases and Immunology, College of Veterinary Medicine, University of Florida, Gainesville, Florida, United States of America.
Xiao YP; Department of Infectious Diseases and Immunology, College of Veterinary Medicine, University of Florida, Gainesville, Florida, United States of America.
Allred DR; Department of Infectious Diseases and Immunology, College of Veterinary Medicine, University of Florida, Gainesville, Florida, United States of America.; Genetics Institute, University of Florida, Gainesville, Florida, United States of America.; Emerging Pathogens Institute, University of Florida, Gainesville, Florida, United States of America.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2019 Aug 06; Vol. 14 (8), pp. e0215882. Date of Electronic Publication: 2019 Aug 06 (Print Publication: 2019).
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Gene Knockout Techniques*
Sequence Homology, Nucleic Acid*
Babesia bovis/*enzymology
Chromosomes, Artificial/*genetics
Rad51 Recombinase/*deficiency
Rad51 Recombinase/*genetics
Babesia bovis/genetics ; Centromere/genetics ; Gene Expression ; Models, Molecular ; Phenotype ; Protein Conformation ; Rad51 Recombinase/chemistry

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Skocz do pozycji: 7.

Tytuł:: Identifying, understanding, and correcting technical artifacts on the sex chromosomes in next-generation sequencing data.
Autorzy:: Webster TH; School of Life Sciences, Arizona State University, 427 E Tyler Mall, Tempe, AZ 85281, USA.; Department of Anthropology, University of Utah, 260 S Central Drive, Carolyn and Kem Gardner Commons, Suite 4625, Salt Lake City, UT 84112, USA.
Couse M; University of British Columbia, 2329 West Mall, Vancouver, BC, V6T 1Z4, Canada.; BC Children's Hospital Research Institute, 950 W 28th Avenue, Vancouver, BC, V5Z 4H4, Canada.
Grande BM; Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC, V5A 1S6, Canada.
Karlins E; Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, 9609 Medical Center Drive, MSC 9776, Bethesda, MD 20892, USA.
Phung TN; Interdepartmental Program in Bioinformatics, UCLA, 621 Charles E. Young Drive South, Los Angeles, CA 90095-1606, USA.
Richmond PA; BC Children's Hospital Research Institute, 950 W 28th Avenue, Vancouver, BC, V5Z 4H4, Canada.; Centre for Molecular Medicine and Therapeutics, University of British Columbia, 950 West 28th Avenue, Vancouver, BC, V52 4H4, Canada.
Whitford W; School of Biological Sciences, The University of Auckland, Private Bag 92019, Auckland 1142, New Zealand.; Centre for Brain Research, The University of Auckland, Private Bag 92019, Auckland 1142, New Zealand.
Wilson MA; School of Life Sciences, Arizona State University, 427 E Tyler Mall, Tempe, AZ 85281, USA.; Center for Evolution and Medicine, Arizona State University, 401 E. Tyler Mall, Tempe, AZ 85287, USA.; Pokaż więcej
Źródło:: GigaScience [Gigascience] 2019 Jul 01; Vol. 8 (7).
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Sequence Homology, Nucleic Acid*
Chromosomes, Human, X/*genetics
Chromosomes, Human, Y/*genetics
High-Throughput Nucleotide Sequencing/*methods
Sequence Analysis, DNA/*methods
Artifacts ; Contig Mapping/methods ; Contig Mapping/standards ; Female ; High-Throughput Nucleotide Sequencing/standards ; Humans ; Male ; Sequence Alignment/methods ; Sequence Alignment/standards ; Sequence Analysis, DNA/standards

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Skocz do pozycji: 8.

Tytuł:: Genomic sequence analyses of classical and non-classical lamprey progesterone receptor genes and the inference of homologous gene evolution in metazoans.
Autorzy:: Ren J; International Research Center for Marine Biosciences, Ministry of Science and Technology, Shanghai Ocean University, Shanghai, 201306, China.; Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources, Ministry of Education, Shanghai Ocean University, Shanghai, 201306, China.; Key Laboratory of Freshwater Aquatic Genetic Resources, Ministry of Agriculture, Shanghai Ocean University, Shanghai, 201306, China.
Chung-Davidson YW; Department of Fisheries and Wildlife, Michigan State University, East Lansing, MI, 48824, USA.
Jia L; International Research Center for Marine Biosciences, Ministry of Science and Technology, Shanghai Ocean University, Shanghai, 201306, China.
Li W; Department of Fisheries and Wildlife, Michigan State University, East Lansing, MI, 48824, USA. .; Pokaż więcej
Źródło:: BMC evolutionary biology [BMC Evol Biol] 2019 Jul 01; Vol. 19 (1), pp. 136. Date of Electronic Publication: 2019 Jul 01.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Evolution, Molecular*
Genomics*
Sequence Homology, Nucleic Acid*
Petromyzon/*genetics
Receptors, Progesterone/*genetics
Animals ; Phylogeny

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Skocz do pozycji: 9.

Tytuł:: GRASP2: fast and memory-efficient gene-centric assembly and homolog search for metagenomic sequencing data.
Autorzy:: Zhong C; Department of Electrical Engineering and Computer Science, University of Kansas, Lawrence, KS, 66045, USA. .
Yang Y; National Marine Biodiversity Institute of Korea, 101-75, Jangsan-ro, Janghang-eup, Seochun-gun, Chungchungnam-do, 33662, South Korea.
Yooseph S; Department of Computer Science, University of Central Florida, Orlando, FL, 32816, USA.; Pokaż więcej
Źródło:: BMC bioinformatics [BMC Bioinformatics] 2019 Jun 06; Vol. 20 (Suppl 11), pp. 276. Date of Electronic Publication: 2019 Jun 06.
Typ publikacji:: Journal Article
MeSH Terms:: Genes*
Sequence Homology, Nucleic Acid*
Software*
Metagenomics/*methods
Sequence Analysis, DNA/*methods
Algorithms ; Aquatic Organisms/genetics ; Microbiota/genetics ; ROC Curve ; Time Factors

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Skocz do pozycji: 10.

Tytuł:: Exploiting orthology and de novo transcriptome assembly to refine target sequence information.
Autorzy:: Söllner JF; Computational Biology & Genomics, Boehringer Ingelheim Pharma GmbH & Co. KG, Birkendorfer Strasse 65, 88397, Biberach an der Riss, Germany.; Drug Discovery Sciences, Boehringer Ingelheim Pharma GmbH & Co. KG, Birkendorfer Strasse 65, 88397, Biberach an der Riss, Germany.
Leparc G; Transl. Medicine + Clin. Pharmacology, Boehringer Ingelheim Pharma GmbH & Co. KG, Birkendorfer Strasse 65, 88397, Biberach an der Riss, Germany.
Zwick M; Computational Biology & Genomics, Boehringer Ingelheim Pharma GmbH & Co. KG, Birkendorfer Strasse 65, 88397, Biberach an der Riss, Germany.
Schönberger T; Drug Discovery Sciences, Boehringer Ingelheim Pharma GmbH & Co. KG, Birkendorfer Strasse 65, 88397, Biberach an der Riss, Germany.
Hildebrandt T; Computational Biology & Genomics, Boehringer Ingelheim Pharma GmbH & Co. KG, Birkendorfer Strasse 65, 88397, Biberach an der Riss, Germany.
Nieselt K; Integrative Transcriptomics, Center for Bioinformatics, University of Tübingen, Sand 14, 72076, Tübingen, Germany.
Simon E; Computational Biology & Genomics, Boehringer Ingelheim Pharma GmbH & Co. KG, Birkendorfer Strasse 65, 88397, Biberach an der Riss, Germany. .; Pokaż więcej
Źródło:: BMC medical genomics [BMC Med Genomics] 2019 May 23; Vol. 12 (1), pp. 69. Date of Electronic Publication: 2019 May 23.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Sequence Homology, Nucleic Acid*
Gene Expression Profiling/*methods
Animals ; Genomics ; Humans ; Sequence Analysis, RNA

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Skocz do pozycji: 11.

Tytuł:: A signal processing method for alignment-free metagenomic binning: multi-resolution genomic binary patterns.
Autorzy:: Kouchaki S; Evolution and Genomic Sciences, School of Biological Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester, M13 9PT, UK. .; Department of Engineering Science, University of Oxford, Oxford, OX3 7DQ, UK. .
Tapinos A; Evolution and Genomic Sciences, School of Biological Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester, M13 9PT, UK.
Robertson DL; Evolution and Genomic Sciences, School of Biological Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester, M13 9PT, UK. .; MRC-University of Glasgow Centre for Virus Research, Glasgow, G61 1QH, UK. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2019 Feb 15; Vol. 9 (1), pp. 2159. Date of Electronic Publication: 2019 Feb 15.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Sequence Homology, Nucleic Acid*
Bacteria/*classification
Bacteria/*genetics
Computational Biology/*methods
Metagenomics/*methods
Algorithms ; Gastrointestinal Microbiome ; Microbiota

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Skocz do pozycji: 12.

Tytuł:: CRISPR/Cas9-mediated mutagenesis of homologous genes in Chinese kale.
Autorzy:: Sun B; College of Horticulture, Sichuan Agricultural University, Chengdu, 611130, China.
Zheng A; College of Horticulture, Sichuan Agricultural University, Chengdu, 611130, China.
Jiang M; College of Horticulture, Sichuan Agricultural University, Chengdu, 611130, China.
Xue S; College of Horticulture, Sichuan Agricultural University, Chengdu, 611130, China.
Yuan Q; College of Horticulture, Sichuan Agricultural University, Chengdu, 611130, China.
Jiang L; College of Horticulture, Sichuan Agricultural University, Chengdu, 611130, China.
Chen Q; College of Horticulture, Sichuan Agricultural University, Chengdu, 611130, China.
Li M; College of Horticulture, Sichuan Agricultural University, Chengdu, 611130, China.
Wang Y; Institute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu, 611130, China.
Zhang Y; College of Horticulture, Sichuan Agricultural University, Chengdu, 611130, China.
Luo Y; College of Horticulture, Sichuan Agricultural University, Chengdu, 611130, China.
Wang X; Institute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu, 611130, China.
Zhang F; College of Horticulture, Sichuan Agricultural University, Chengdu, 611130, China. zhangf_.
Tang H; College of Horticulture, Sichuan Agricultural University, Chengdu, 611130, China. .; Institute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu, 611130, China. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2018 Nov 14; Vol. 8 (1), pp. 16786. Date of Electronic Publication: 2018 Nov 14.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Mutagenesis, Site-Directed*
Sequence Homology, Nucleic Acid*
Brassica/*genetics
CRISPR-Cas Systems/*genetics
Genes, Plant/*genetics
China ; Genetic Association Studies ; Mutation ; Plant Proteins/genetics ; Plants, Genetically Modified

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Skocz do pozycji: 13.

Tytuł:: Rapid and pervasive development- and tissue-specific homeolog expression partitioning in newly formed inter-subspecific rice segmental allotetraploids.
Autorzy:: Zhao L; Key laboratory of Molecular Epigenetics of Ministry of Education (MOE), Northeast Normal University, Changchun, 130024, China.
Han L; Key laboratory of Molecular Epigenetics of Ministry of Education (MOE), Northeast Normal University, Changchun, 130024, China.
Xiao C; Key laboratory of Molecular Epigenetics of Ministry of Education (MOE), Northeast Normal University, Changchun, 130024, China.
Lin X; Key laboratory of Molecular Epigenetics of Ministry of Education (MOE), Northeast Normal University, Changchun, 130024, China.
Xu C; Key laboratory of Molecular Epigenetics of Ministry of Education (MOE), Northeast Normal University, Changchun, 130024, China.
Yang C; Key laboratory of Molecular Epigenetics of Ministry of Education (MOE), Northeast Normal University, Changchun, 130024, China. .; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2018 Oct 19; Vol. 19 (1), pp. 756. Date of Electronic Publication: 2018 Oct 19.
Typ publikacji:: Journal Article
MeSH Terms:: Gene Expression Profiling*
Gene Expression Regulation, Developmental*
Polyploidy*
Sequence Homology, Nucleic Acid*
Oryza/*genetics
Oryza/*growth & development
Hybridization, Genetic ; Time Factors

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Skocz do pozycji: 14.

Tytuł:: Chromosome identification in Cucumis anguria revealed by cross-species single-copy gene FISH.
Autorzy:: Li Z; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Bi Y; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Wang X; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Wang Y; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Yang S; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Zhang Z; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Chen J; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.
Lou Q; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.; Pokaż więcej
Źródło:: Genome [Genome] 2018 Jun; Vol. 61 (6), pp. 397-404. Date of Electronic Publication: 2018 Apr 03.
Typ publikacji:: Journal Article
MeSH Terms:: Sequence Homology, Nucleic Acid*
Chromosomes, Plant/*genetics
Cucumis/*genetics
Genes, Plant ; Heterochromatin/genetics ; Karyotype

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Skocz do pozycji: 15.

Tytuł:: Long non‑coding RNA CTBP1‑AS2 upregulates USP22 to promote pancreatic carcinoma progression by sponging miR‑141‑3p.
Autorzy:: Zhang M; Department of General Surgery, People's Hospital of Ningxia Hui Autonomous Region, Ningxia Hui Autonomous Region, Yinchuan 750021, P.R. China.
Ma S; Department of General Surgery, People's Hospital of Ningxia Hui Autonomous Region, Ningxia Hui Autonomous Region, Yinchuan 750021, P.R. China.
Li X; Department of General Surgery, People's Hospital of Ningxia Hui Autonomous Region, Ningxia Hui Autonomous Region, Yinchuan 750021, P.R. China.
Yu H; Department of General Surgery, People's Hospital of Ningxia Hui Autonomous Region, Ningxia Hui Autonomous Region, Yinchuan 750021, P.R. China.
Tan Y; Department of Hepatopancreatobiliary Surgery, The 2nd Hospital of Kunming Medical University, Kunming, Yunnan 650101, P.R. China.
He J; Department of Hepatopancreatobiliary Surgery, The 2nd Hospital of Kunming Medical University, Kunming, Yunnan 650101, P.R. China.
Wei X; Department of General Surgery, People's Hospital of Ningxia Hui Autonomous Region, Ningxia Hui Autonomous Region, Yinchuan 750021, P.R. China.
Ma J; Department of General Surgery, People's Hospital of Ningxia Hui Autonomous Region, Ningxia Hui Autonomous Region, Yinchuan 750021, P.R. China.; Pokaż więcej
Źródło:: Molecular medicine reports [Mol Med Rep] 2022 Mar; Vol. 25 (3). Date of Electronic Publication: 2022 Jan 18.
Typ publikacji:: Journal Article
MeSH Terms:: Gene Expression Regulation, Neoplastic*
MicroRNAs/*genetics
Pancreatic Neoplasms/*genetics
RNA, Long Noncoding/*genetics
Ubiquitin Thiolesterase/*genetics
Apoptosis/genetics ; Base Sequence ; Cell Line ; Cell Line, Tumor ; Cell Movement/genetics ; Cell Proliferation/genetics ; Disease Progression ; Female ; HEK293 Cells ; Humans ; Male ; Middle Aged ; Pancreatic Neoplasms/metabolism ; Pancreatic Neoplasms/pathology ; RNA Interference ; Sequence Homology, Nucleic Acid ; Ubiquitin Thiolesterase/metabolism ; Up-Regulation

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Skocz do pozycji: 16.

Tytuł:: A Case Study of the Morphological and Molecular Variation within a Ciliate Genus: Taxonomic Descriptions of Three Dysteria Species (Ciliophora, Cyrtophoria), with the Establishment of a New Species.
Autorzy:: Zhao X; School of Marine Sciences, Ningbo University, Ningbo 315800, China.
Zhang H; School of Marine Sciences, Ningbo University, Ningbo 315800, China.
Zhang Q; Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai 264003, China.
Qu Z; State Key Laboratory of Marine Environmental Science, College of the Environment & Ecology, Xiamen University, Xiamen 361104, China.
Warren A; Department of Life Sciences, Natural History Museum, London SW7 5BD, UK.
Wu D; School of Marine Sciences, Ningbo University, Ningbo 315800, China.
Chen X; School of Marine Sciences, Ningbo University, Ningbo 315800, China.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2022 Feb 03; Vol. 23 (3). Date of Electronic Publication: 2022 Feb 03.
Typ publikacji:: Journal Article
MeSH Terms:: Phylogeny*
Ciliophora/*classification
Ciliophora/*genetics
Base Sequence ; China ; DNA, Ribosomal/genetics ; Geography ; Likelihood Functions ; RNA, Ribosomal/genetics ; Ribosome Subunits, Small/genetics ; Sequence Homology, Nucleic Acid ; Species Specificity

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Skocz do pozycji: 17.

Tytuł:: Alternative splicing after gene duplication drives CEACAM1-paralog diversification in the horse.
Autorzy:: Mißbach S; Institute of Immunology, Friedrich-Loeffler-Institut, Suedufer 10, Greifswald, Insel Riems, Germany.; Plattform Degenerative Erkrankungen, Deutsches Primatenzentrum GmbH, Goettingen, Germany.
Aleksic D; Institute of Immunology, Friedrich-Loeffler-Institut, Suedufer 10, Greifswald, Insel Riems, Germany.
Blaschke L; Institute of Immunology, Friedrich-Loeffler-Institut, Suedufer 10, Greifswald, Insel Riems, Germany.
Hassemer T; Institute of Immunology, Friedrich-Loeffler-Institut, Suedufer 10, Greifswald, Insel Riems, Germany.; Department of Cellular Biochemistry, Max-Planck-Institute of Biochemistry, Martinsried, Germany.
Lee KJ; Institute of Immunology, Friedrich-Loeffler-Institut, Suedufer 10, Greifswald, Insel Riems, Germany.; Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea.
Mansfeld M; Institute of Immunology, Friedrich-Loeffler-Institut, Suedufer 10, Greifswald, Insel Riems, Germany.
Hänske J; Institute of Immunology, Friedrich-Loeffler-Institut, Suedufer 10, Greifswald, Insel Riems, Germany.
Handler J; Clinic for Horses, Veterinary Faculty, Freie Universität Berlin, Oertzenweg 19b, D-14163, Berlin, Germany.
Kammerer R; Institute of Immunology, Friedrich-Loeffler-Institut, Suedufer 10, Greifswald, Insel Riems, Germany. .; Friedrich-Loeffler-Institut, Bundesforschungsinstitut für Tiergesundheit, Federal Research Institute for Animal Health, Südufer 10, D, 17493, Greifswald, Insel Riems, Germany. .; Pokaż więcej
Źródło:: BMC evolutionary biology [BMC Evol Biol] 2018 Mar 15; Vol. 18 (1), pp. 32. Date of Electronic Publication: 2018 Mar 15.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Duplication*
Genetic Variation*
Sequence Homology, Nucleic Acid*
Alternative Splicing/*genetics
Antigens, CD/*genetics
Cell Adhesion Molecules/*genetics
Horses/*genetics
Amino Acid Motifs ; Amino Acid Sequence ; Animals ; Antigens, CD/chemistry ; Base Sequence ; Cell Adhesion Molecules/chemistry ; Codon/genetics ; Exons/genetics ; Humans ; Leukocytes, Mononuclear/metabolism ; Protein Domains ; Protein Isoforms/genetics ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Rabbits

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Skocz do pozycji: 18.

Tytuł:: Defining objective clusters for rabies virus sequences using affinity propagation clustering.
Autorzy:: Fischer S; Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Epidemiology, Greifswald-Insel Riems, Germany.
Freuling CM; Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Molecular Virology and Cell Biology, OIE Reference Laboratory for Rabies, WHO Collaborating Centre for Rabies Surveillance and Research, Greifswald-Insel Riems, Germany.
Müller T; Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Molecular Virology and Cell Biology, OIE Reference Laboratory for Rabies, WHO Collaborating Centre for Rabies Surveillance and Research, Greifswald-Insel Riems, Germany.
Pfaff F; Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Diagnostic Virology, Greifswald-Insel Riems, Germany.
Bodenhofer U; Institute of Bioinformatics, Johannes Kepler University Linz, Linz, Austria.
Höper D; Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Molecular Virology and Cell Biology, OIE Reference Laboratory for Rabies, WHO Collaborating Centre for Rabies Surveillance and Research, Greifswald-Insel Riems, Germany.
Fischer M; Institute of Mathematics and Computer Science, University Greifswald, Greifswald, Germany.
Marston DA; Wildlife Zoonoses and Vector-Borne Diseases Research Group, Animal and Plant Health Agency (APHA), OIE Reference Laboratory for Rabies, WHO Collaborating Centre for Characterization of Lyssaviruses, Weybridge, United Kingdom.
Fooks AR; Wildlife Zoonoses and Vector-Borne Diseases Research Group, Animal and Plant Health Agency (APHA), OIE Reference Laboratory for Rabies, WHO Collaborating Centre for Characterization of Lyssaviruses, Weybridge, United Kingdom.
Mettenleiter TC; Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Molecular Virology and Cell Biology, OIE Reference Laboratory for Rabies, WHO Collaborating Centre for Rabies Surveillance and Research, Greifswald-Insel Riems, Germany.
Conraths FJ; Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Epidemiology, Greifswald-Insel Riems, Germany.
Homeier-Bachmann T; Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Epidemiology, Greifswald-Insel Riems, Germany.; Pokaż więcej
Źródło:: PLoS neglected tropical diseases [PLoS Negl Trop Dis] 2018 Jan 22; Vol. 12 (1), pp. e0006182. Date of Electronic Publication: 2018 Jan 22 (Print Publication: 2018).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Cluster Analysis*
Phylogeny*
Sequence Homology, Nucleic Acid*
Computational Biology/*methods
RNA, Viral/*genetics
Rabies virus/*classification
Rabies virus/*genetics
Algorithms

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Tytuł:: HERV-W group evolutionary history in non-human primates: characterization of ERV-W orthologs in Catarrhini and related ERV groups in Platyrrhini.
Autorzy:: Grandi N; Department of Life and Environmental Sciences, University of Cagliari, Cagliari, Italy.
Cadeddu M; Department of Life and Environmental Sciences, University of Cagliari, Cagliari, Italy.
Blomberg J; Department of Medical Sciences, Uppsala University, Uppsala, Sweden.
Mayer J; Institute of Human Genetics, University of Saarland, Homburg, Germany.
Tramontano E; Department of Life and Environmental Sciences, University of Cagliari, Cagliari, Italy. .; Istituto di Ricerca Genetica e Biomedica (IRGB), CNR, Monserrato, Italy. .; Pokaż więcej
Źródło:: BMC evolutionary biology [BMC Evol Biol] 2018 Jan 19; Vol. 18 (1), pp. 6. Date of Electronic Publication: 2018 Jan 19.
Typ publikacji:: Journal Article
MeSH Terms:: Biological Evolution*
Sequence Homology, Nucleic Acid*
Catarrhini/*virology
Endogenous Retroviruses/*genetics
Platyrrhini/*virology
Animals ; Base Sequence ; Evolution, Molecular ; Genome ; Humans ; Phylogeny ; Species Specificity

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Tytuł:: Genome-wide promoter analysis, homology modeling and protein interaction network of Dehydration Responsive Element Binding (DREB) gene family in Solanum tuberosum.
Autorzy:: Ain-Ali QU; Department of Plant Biotechnology, Atta-ur-Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan.
Mushtaq N; Department of Plant Biotechnology, Atta-ur-Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan.
Amir R; Department of Plant Biotechnology, Atta-ur-Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan.
Gul A; Department of Plant Biotechnology, Atta-ur-Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan.
Tahir M; Department of Plant Biotechnology, Atta-ur-Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan.
Munir F; Department of Plant Biotechnology, Atta-ur-Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2021 Dec 16; Vol. 16 (12), pp. e0261215. Date of Electronic Publication: 2021 Dec 16 (Print Publication: 2021).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Promoter Regions, Genetic/*genetics
Solanum tuberosum/*genetics
Transcription Factors/*genetics
Arabidopsis/genetics ; Dehydration/genetics ; Droughts ; Gene Expression/genetics ; Gene Expression Regulation, Plant/genetics ; Genome-Wide Association Study/methods ; Plant Proteins/genetics ; Plants, Genetically Modified/genetics ; Protein Interaction Mapping/methods ; Protein Interaction Maps/genetics ; Salt Stress/genetics ; Sequence Homology, Nucleic Acid ; Solanum tuberosum/growth & development ; Stress, Physiological/genetics ; Transcription Factors/metabolism

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