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Tytuł :
Dynamic expression of Ralstonia solanacearum virulence factors and metabolism-controlling genes during plant infection.
Autorzy :
de Pedro-Jové R; Department of Genetics, University of Barcelona, Barcelona, Catalonia, Spain.; Centre for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Bellaterra, Catalonia, Spain.
Puigvert M; Department of Genetics, University of Barcelona, Barcelona, Catalonia, Spain.; Centre for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Bellaterra, Catalonia, Spain.
Sebastià P; Centre for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Bellaterra, Catalonia, Spain.
Macho AP; Shanghai Center for Plant Stress Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 201602, China.
Monteiro JS; Departamento de Bioquímica, Universidade de São Paulo, São Paulo, Brazil.
Coll NS; Centre for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Bellaterra, Catalonia, Spain.
Setúbal JC; Departamento de Bioquímica, Universidade de São Paulo, São Paulo, Brazil.
Valls M; Department of Genetics, University of Barcelona, Barcelona, Catalonia, Spain. .; Centre for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Bellaterra, Catalonia, Spain. .
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Źródło :
BMC genomics [BMC Genomics] 2021 Mar 09; Vol. 22 (1), pp. 170. Date of Electronic Publication: 2021 Mar 09.
Typ publikacji :
Journal Article
Czasopismo naukowe
Tytuł :
Assessing the efficacy of eDNA metabarcoding for measuring microbial biodiversity within forest ecosystems.
Autorzy :
Ladin ZS; Department of Plant and Soil Sciences, University of Delaware, 264 Townsend Hall, Newark, DE, 19716, USA. .
Ferrell B; Department of Plant and Soil Sciences, Delaware Biotechnology Institute, University of Delaware, Newark, DE, 19716, USA.
Dums JT; Biotechnology Program, North Carolina State University, Raleigh, NC, 27695, USA.
Moore RM; Department of Plant and Soil Sciences, Delaware Biotechnology Institute, University of Delaware, Newark, DE, 19716, USA.
Levia DF; Department of Entomology and Wildlife Ecology, University of Delaware, 250 Townsend Hall, Newark, DE, 19716, USA.
Shriver WG; Departments of Geography and Spatial Sciences and Plant and Soil Sciences, University of Delaware, 216C Pearson Hall, Newark, DE, 19716, USA.
D'Amico V; US Forest Service, Northern Research Station, Newark, DE, USA.
Trammell TLE; Department of Plant and Soil Sciences, University of Delaware, 264 Townsend Hall, Newark, DE, 19716, USA.
Setubal JC; Instituto de Química, University of Sao Paulo, São Paulo, SP, 05508-000, Brazil.
Wommack KE; Department of Plant and Soil Sciences, University of Delaware, 264 Townsend Hall, Newark, DE, 19716, USA.
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Źródło :
Scientific reports [Sci Rep] 2021 Jan 15; Vol. 11 (1), pp. 1629. Date of Electronic Publication: 2021 Jan 15.
Typ publikacji :
Journal Article
Czasopismo naukowe
Tytuł :
Editorial: Computational Methods for Microbiome Analysis.
Autorzy :
Setubal JC; Department of Biochemistry, Institute of Chemistry, University of São Paulo, São Paulo, Brazil.
Stoye J; Faculty of Technology and Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, Germany.
Dutilh BE; Theoretical Biology and Bioinformatics, Department of Biology, Science for Life, Utrecht University, Utrecht, Netherlands.
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Źródło :
Frontiers in genetics [Front Genet] 2020 Dec 11; Vol. 11, pp. 623897. Date of Electronic Publication: 2020 Dec 11 (Print Publication: 2020).
Typ publikacji :
Editorial
Opinia redakcyjna
Tytuł :
Analysis of biliary MICRObiota in hepatoBILIOpancreatic diseases compared to healthy people [MICROBILIO]: Study protocol.
Autorzy :
Nascimento FSD; Faculty of Medicine FMUSP, University of São Paulo, São Paulo, São Paulo, Brazil.
Suzuki MO; Faculty of Medicine FMUSP, University of São Paulo, São Paulo, São Paulo, Brazil.
Taba JV; Faculty of Medicine FMUSP, University of São Paulo, São Paulo, São Paulo, Brazil.
de Mattos VC; Faculty of Medicine FMUSP, University of São Paulo, São Paulo, São Paulo, Brazil.
Pipek LZ; Faculty of Medicine FMUSP, University of São Paulo, São Paulo, São Paulo, Brazil.
D'Albuquerque EMC; Santa Marcelina Faculty, São Paulo, São Paulo, Brazil.
Iuamoto L; Colaborator, Center of Acupuncture, Department of Orthopaedics and Traumatology, University of Sao Paulo School of Medicine, São Paulo, São Paulo, Brazil.
Meyer A; Department of Gastroenterology, Hospital das Clínicas, HCFMUSP, São Paulo, São Paulo, Brazil.
Andraus W; Department of Gastroenterology, Hospital das Clínicas, HCFMUSP, São Paulo, São Paulo, Brazil.
Pinho JRR; Department of Gastroenterology, Hospital das Clínicas, HCFMUSP, São Paulo, São Paulo, Brazil.
de Moura EGH; Department of Gastroenterology, Hospital das Clínicas, HCFMUSP, São Paulo, São Paulo, Brazil.
Setubal JC; Department of Biochemistry, Institute of Chemistry, University of São Paulo, São Paulo, São Paulo, Brazil.
Carneiro-D'Albuquerque LA; Department of Gastroenterology, Hospital das Clínicas, HCFMUSP, São Paulo, São Paulo, Brazil.
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Źródło :
PloS one [PLoS One] 2020 Nov 19; Vol. 15 (11), pp. e0242553. Date of Electronic Publication: 2020 Nov 19 (Print Publication: 2020).
Typ publikacji :
Journal Article; Observational Study
MeSH Terms :
Microbiota*/genetics
Bile/*microbiology
Digestive System Diseases/*microbiology
Adult ; Case-Control Studies ; Cholangiopancreatography, Endoscopic Retrograde ; DNA, Bacterial/genetics ; Female ; Humans ; Liver Transplantation ; Living Donors ; Male ; Metagenome ; Middle Aged ; RNA, Bacterial/genetics ; RNA, Ribosomal, 16S/genetics ; Ribotyping ; Young Adult
Czasopismo naukowe
Tytuł :
Complete genome sequence and analysis of Alcaligenes faecalis strain Mc250, a new potential plant bioinoculant.
Autorzy :
Felestrino ÉB; Núcleo de Pesquisas em Ciências Biológicas (NUPEB), Universidade Federal de Ouro Preto, Ouro Preto, MG, Brazil.
Sanchez AB; Núcleo de Pesquisas em Ciências Biológicas (NUPEB), Universidade Federal de Ouro Preto, Ouro Preto, MG, Brazil.
Caneschi WL; Núcleo de Pesquisas em Ciências Biológicas (NUPEB), Universidade Federal de Ouro Preto, Ouro Preto, MG, Brazil.
Lemes CGC; Núcleo de Pesquisas em Ciências Biológicas (NUPEB), Universidade Federal de Ouro Preto, Ouro Preto, MG, Brazil.
Assis RAB; Núcleo de Pesquisas em Ciências Biológicas (NUPEB), Universidade Federal de Ouro Preto, Ouro Preto, MG, Brazil.
Cordeiro IF; Núcleo de Pesquisas em Ciências Biológicas (NUPEB), Universidade Federal de Ouro Preto, Ouro Preto, MG, Brazil.
Fonseca NP; Núcleo de Pesquisas em Ciências Biológicas (NUPEB), Universidade Federal de Ouro Preto, Ouro Preto, MG, Brazil.
Villa MM; Departamento de Ciências Biológicas (DECBI), Instituto de Ciências Exatas e Biológicas (ICEB), Universidade Federal de Ouro Preto (UFOP), Ouro Preto, MG, Brazil.
Vieira IT; Departamento de Ciências Biológicas (DECBI), Instituto de Ciências Exatas e Biológicas (ICEB), Universidade Federal de Ouro Preto (UFOP), Ouro Preto, MG, Brazil.
Kamino LHY; Instituto Prístino, Belo Horizonte, MG, Brazil.
do Carmo FF; Instituto Prístino, Belo Horizonte, MG, Brazil.
da Silva AM; Departamento de Bioquímica (DBQ), Instituto de Química (IQ), Universidade de São Paulo (USP), São Paulo, SP, Brazil.
Thomas AM; Departamento de Bioquímica (DBQ), Instituto de Química (IQ), Universidade de São Paulo (USP), São Paulo, SP, Brazil.
Patané JSL; Departamento de Bioquímica (DBQ), Instituto de Química (IQ), Universidade de São Paulo (USP), São Paulo, SP, Brazil.
Ferreira FC; Instituto de Biotecnologia Aplicada a Agropecuária (BIOAGRO), Universidade Federal de Viçosa (UFV), Viçosa, MG, Brazil.
de Freitas LG; Instituto de Biotecnologia Aplicada a Agropecuária (BIOAGRO), Universidade Federal de Viçosa (UFV), Viçosa, MG, Brazil.
Varani AM; Departamento de Tecnologia, Faculdade de Ciências Agrárias e Veterinárias de Jaboticabal (FCAV), Universidade Estadual Paulista (UNESP), São Paulo, SP, Brazil.
Ferro JA; Departamento de Tecnologia, Faculdade de Ciências Agrárias e Veterinárias de Jaboticabal (FCAV), Universidade Estadual Paulista (UNESP), São Paulo, SP, Brazil.
Silva RS; Faculdade de Computação (FACOM), Universidade Federal de Mato Grosso do Sul, Campo Grande, MS, Brazil.
Almeida NF; Faculdade de Computação (FACOM), Universidade Federal de Mato Grosso do Sul, Campo Grande, MS, Brazil.
Garcia CCM; Núcleo de Pesquisas em Ciências Biológicas (NUPEB), Universidade Federal de Ouro Preto, Ouro Preto, MG, Brazil.; Departamento de Ciências Biológicas (DECBI), Instituto de Ciências Exatas e Biológicas (ICEB), Universidade Federal de Ouro Preto (UFOP), Ouro Preto, MG, Brazil.
Setubal JC; Departamento de Bioquímica (DBQ), Instituto de Química (IQ), Universidade de São Paulo (USP), São Paulo, SP, Brazil.
Moreira LM; Núcleo de Pesquisas em Ciências Biológicas (NUPEB), Universidade Federal de Ouro Preto, Ouro Preto, MG, Brazil.; Departamento de Ciências Biológicas (DECBI), Instituto de Ciências Exatas e Biológicas (ICEB), Universidade Federal de Ouro Preto (UFOP), Ouro Preto, MG, Brazil.
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Źródło :
PloS one [PLoS One] 2020 Nov 05; Vol. 15 (11), pp. e0241546. Date of Electronic Publication: 2020 Nov 05 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Genome, Bacterial*
Whole Genome Sequencing*
Alcaligenes faecalis/*genetics
Citrus/*microbiology
Alcaligenes faecalis/drug effects ; Animals ; Anti-Bacterial Agents/pharmacology ; Base Sequence ; Citrus/parasitology ; DNA, Circular/genetics ; Drug Resistance, Microbial/drug effects ; Drug Resistance, Microbial/genetics ; Genomic Islands/genetics ; Iron/metabolism ; Metals, Heavy/toxicity ; Mimosa/microbiology ; Nematoda/physiology ; Phenols/metabolism ; Phylogeny
Czasopismo naukowe

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