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Wyszukujesz frazę ""Transcription, Genetic"" wg kryterium: Temat


Tytuł:
Analysis of core promoter and transcription factors screening of porcine ATG7 gene.
Autorzy:
Li M; Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China.
Xing W; Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China.
Wang B; Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China.
Qi N; Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China.
Liu J; Jiangsu Key Laboratory of Sericultural Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China. Electronic address: .
Yu S; Department of Occupational Medicine and Environmental Toxicology, Nantong Key Laboratory of Environmental Toxicology, School of Public Health, Nantong University, Nantong 226019, China. Electronic address: .
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Źródło:
Gene [Gene] 2024 Mar 20; Vol. 899, pp. 148138. Date of Electronic Publication: 2024 Jan 04.
Typ publikacji:
Journal Article
MeSH Terms:
Transcription Factors*
Transcription, Genetic*
Animals ; Swine/genetics ; Promoter Regions, Genetic ; Genes, Regulator
Czasopismo naukowe
Tytuł:
Influence of cell volume on the gene transcription rate.
Autorzy:
Pérez-Ortín JE; Instituto de Biotecnología y Biomedicina (BIOTECMED), Facultad de Biológicas, Universitat de València, C/ Dr. Moliner 50, E46100 Burjassot, Spain. Electronic address: .
García-Marcelo MJ; Instituto de Biotecnología y Biomedicina (BIOTECMED), Facultad de Biológicas, Universitat de València, C/ Dr. Moliner 50, E46100 Burjassot, Spain; Instituto de Biomedicina de Sevilla, Universidad de Sevilla-CSIC-Hospital Universitario V. del Rocío, Seville 41012, Spain; Departamento de Genética, Facultad de Biología, Universidad de Sevilla, Seville, Spain.
Delgado-Román I; Instituto de Biomedicina de Sevilla, Universidad de Sevilla-CSIC-Hospital Universitario V. del Rocío, Seville 41012, Spain; Departamento de Genética, Facultad de Biología, Universidad de Sevilla, Seville, Spain.
Muñoz-Centeno MC; Instituto de Biomedicina de Sevilla, Universidad de Sevilla-CSIC-Hospital Universitario V. del Rocío, Seville 41012, Spain; Departamento de Genética, Facultad de Biología, Universidad de Sevilla, Seville, Spain.
Chávez S; Instituto de Biomedicina de Sevilla, Universidad de Sevilla-CSIC-Hospital Universitario V. del Rocío, Seville 41012, Spain; Departamento de Genética, Facultad de Biología, Universidad de Sevilla, Seville, Spain.
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Źródło:
Biochimica et biophysica acta. Gene regulatory mechanisms [Biochim Biophys Acta Gene Regul Mech] 2024 Mar; Vol. 1867 (1), pp. 195008. Date of Electronic Publication: 2024 Jan 19.
Typ publikacji:
Journal Article; Review
MeSH Terms:
Transcription, Genetic*
DNA-Directed RNA Polymerases*/genetics
DNA-Directed RNA Polymerases*/metabolism
Saccharomyces cerevisiae/genetics ; Saccharomyces cerevisiae/metabolism ; RNA/metabolism ; Cell Size
Czasopismo naukowe
Tytuł:
Single-molecule visualization of twin-supercoiled domains generated during transcription.
Autorzy:
Janissen R; Department of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, South-Holland 2629HZ, The Netherlands.
Barth R; Department of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, South-Holland 2629HZ, The Netherlands.
Polinder M; Department of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, South-Holland 2629HZ, The Netherlands.
van der Torre J; Department of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, South-Holland 2629HZ, The Netherlands.
Dekker C; Department of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, South-Holland 2629HZ, The Netherlands.
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Źródło:
Nucleic acids research [Nucleic Acids Res] 2024 Feb 28; Vol. 52 (4), pp. 1677-1687.
Typ publikacji:
Journal Article
MeSH Terms:
DNA, Bacterial*/metabolism
DNA, Superhelical*/genetics
Transcription, Genetic*
DNA/genetics ; DNA-Directed RNA Polymerases/genetics ; DNA-Directed RNA Polymerases/metabolism ; RNA
Czasopismo naukowe
Tytuł:
Single-molecule RNA sizing enables quantitative analysis of alternative transcription termination.
Autorzy:
Patiño-Guillén G; Cavendish Laboratory, University of Cambridge, Cambridge, UK.
Pešović J; University of Belgrade - Faculty of Biology, Centre for Human Molecular Genetics, Belgrade, Serbia.
Panić M; University of Belgrade - Faculty of Biology, Centre for Human Molecular Genetics, Belgrade, Serbia.; Institute of Virology, Vaccines and Sera 'Torlak', Belgrade, Serbia.
Savić-Pavićević D; University of Belgrade - Faculty of Biology, Centre for Human Molecular Genetics, Belgrade, Serbia.
Bošković F; Cavendish Laboratory, University of Cambridge, Cambridge, UK. .
Keyser UF; Cavendish Laboratory, University of Cambridge, Cambridge, UK. .
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Źródło:
Nature communications [Nat Commun] 2024 Feb 24; Vol. 15 (1), pp. 1699. Date of Electronic Publication: 2024 Feb 24.
Typ publikacji:
Journal Article
MeSH Terms:
RNA*/genetics
Transcription, Genetic*
DNA-Directed RNA Polymerases/genetics ; DNA-Directed RNA Polymerases/metabolism ; DNA, Circular ; Nanotechnology
Czasopismo naukowe
Tytuł:
Economy of Effort or Sophisticated Programming? The Prevalence of Bidirectional Promoter Complexes in the Human Genome.
Autorzy:
Anderson EM; Cancer Innovation Laboratory, Center for Cancer Research, National Cancer Institute, Frederick, MD 21702, USA.
Anderson SK; Cancer Innovation Laboratory, Center for Cancer Research, National Cancer Institute, Frederick, MD 21702, USA.; Basic Science Program, Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USA.
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Źródło:
Genes [Genes (Basel)] 2024 Feb 18; Vol. 15 (2). Date of Electronic Publication: 2024 Feb 18.
Typ publikacji:
Journal Article; Review
MeSH Terms:
Transcription, Genetic*
Genome, Human*
Humans ; Prevalence ; Promoter Regions, Genetic ; Gene Expression Regulation/genetics
Czasopismo naukowe
Tytuł:
Development of Cell-Free Transcription-Translation Systems in Three Soil Pseudomonads.
Autorzy:
Meyerowitz JT; Division of Biology and Biological Engineering, California Institute of Technology 1200 E. California Blvd, MC 138-78, Pasadena, California 91125, United States.
Larsson EM; Division of Biology and Biological Engineering, California Institute of Technology 1200 E. California Blvd, MC 138-78, Pasadena, California 91125, United States.
Murray RM; Division of Biology and Biological Engineering, California Institute of Technology 1200 E. California Blvd, MC 138-78, Pasadena, California 91125, United States.
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Źródło:
ACS synthetic biology [ACS Synth Biol] 2024 Feb 16; Vol. 13 (2), pp. 530-537. Date of Electronic Publication: 2024 Feb 06.
Typ publikacji:
Journal Article
MeSH Terms:
Transcription, Genetic*
Protein Biosynthesis*/genetics
Cell-Free System/metabolism ; Escherichia coli/genetics ; DNA/metabolism
Czasopismo naukowe
Tytuł:
Transcription complexes recruit a chaperone to perform cotranscriptional processing of tRNA.
Autorzy:
Jarrous N; Department of Microbiology and Molecular Genetics, IMRIC, The Hebrew University-Hadassah Medical School, Jerusalem 9112010, Israel. Electronic address: .
Mani D; Department of Microbiology and Molecular Genetics, IMRIC, The Hebrew University-Hadassah Medical School, Jerusalem 9112010, Israel.
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Źródło:
Molecular cell [Mol Cell] 2024 Feb 15; Vol. 84 (4), pp. 619-620.
Typ publikacji:
Journal Article
MeSH Terms:
Transcription, Genetic*
RNA, Transfer*/genetics
Molecular Chaperones/genetics ; Molecular Chaperones/metabolism ; HSP70 Heat-Shock Proteins/genetics ; HSP70 Heat-Shock Proteins/metabolism ; RNA Polymerase III/metabolism
Czasopismo naukowe
Tytuł:
Mechanisms and Functions of the RNA Polymerase II General Transcription Machinery during the Transcription Cycle.
Autorzy:
Archuleta SR; Department of Biochemistry, University of Colorado Boulder, 596 UCB, Boulder, CO 80309, USA.
Goodrich JA; Department of Biochemistry, University of Colorado Boulder, 596 UCB, Boulder, CO 80309, USA.
Kugel JF; Department of Biochemistry, University of Colorado Boulder, 596 UCB, Boulder, CO 80309, USA.
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Źródło:
Biomolecules [Biomolecules] 2024 Feb 01; Vol. 14 (2). Date of Electronic Publication: 2024 Feb 01.
Typ publikacji:
Journal Article; Review
MeSH Terms:
RNA Polymerase II*/chemistry
Transcription, Genetic*
Humans ; Transcription Factors/metabolism ; Promoter Regions, Genetic ; RNA, Messenger
Czasopismo naukowe
Tytuł:
Translation selectively destroys non-functional transcription complexes.
Autorzy:
Woodgate J; Centre for Bacterial Cell Biology, Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle Upon Tyne, UK.
Mosaei H; Centre for Bacterial Cell Biology, Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle Upon Tyne, UK.
Brazda P; Centre for Bacterial Cell Biology, Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle Upon Tyne, UK.
Stevenson-Jones F; Centre for Bacterial Cell Biology, Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle Upon Tyne, UK.
Zenkin N; Centre for Bacterial Cell Biology, Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle Upon Tyne, UK. .
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Źródło:
Nature [Nature] 2024 Feb; Vol. 626 (8000), pp. 891-896. Date of Electronic Publication: 2024 Feb 07.
Typ publikacji:
Journal Article
MeSH Terms:
DNA-Directed RNA Polymerases*/chemistry
DNA-Directed RNA Polymerases*/metabolism
Escherichia coli*/genetics
Escherichia coli*/metabolism
Protein Biosynthesis*
Transcription, Genetic*
Catalytic Domain ; DNA Helicases/metabolism ; DNA Repair ; DNA, Bacterial/genetics ; DNA, Bacterial/metabolism ; Escherichia coli Proteins/metabolism ; Kinetics ; Ribosomes/metabolism ; Templates, Genetic ; Transcription Elongation, Genetic ; Genome, Bacterial
Czasopismo naukowe
Tytuł:
Pig-eRNAdb: a comprehensive enhancer and eRNA dataset of pigs.
Autorzy:
Wang Y; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Guangdong Laboratory of Lingnan Modern Agriculture, National Engineering Research Center for Breeding Swine Industry, State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science, South China Agricultural University, Guangzhou, 510642, China.
Jin W; Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China.
Pan X; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Guangdong Laboratory of Lingnan Modern Agriculture, National Engineering Research Center for Breeding Swine Industry, State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science, South China Agricultural University, Guangzhou, 510642, China.
Liao W; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Guangdong Laboratory of Lingnan Modern Agriculture, National Engineering Research Center for Breeding Swine Industry, State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science, South China Agricultural University, Guangzhou, 510642, China.
Shen Q; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Guangdong Laboratory of Lingnan Modern Agriculture, National Engineering Research Center for Breeding Swine Industry, State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science, South China Agricultural University, Guangzhou, 510642, China.
Cai J; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Guangdong Laboratory of Lingnan Modern Agriculture, National Engineering Research Center for Breeding Swine Industry, State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science, South China Agricultural University, Guangzhou, 510642, China.
Gong W; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Guangdong Laboratory of Lingnan Modern Agriculture, National Engineering Research Center for Breeding Swine Industry, State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science, South China Agricultural University, Guangzhou, 510642, China.
Tian Y; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Guangdong Laboratory of Lingnan Modern Agriculture, National Engineering Research Center for Breeding Swine Industry, State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science, South China Agricultural University, Guangzhou, 510642, China.
Xu D; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Guangdong Laboratory of Lingnan Modern Agriculture, National Engineering Research Center for Breeding Swine Industry, State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science, South China Agricultural University, Guangzhou, 510642, China.
Li Y; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Guangdong Laboratory of Lingnan Modern Agriculture, National Engineering Research Center for Breeding Swine Industry, State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science, South China Agricultural University, Guangzhou, 510642, China.
Li J; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Guangdong Laboratory of Lingnan Modern Agriculture, National Engineering Research Center for Breeding Swine Industry, State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science, South China Agricultural University, Guangzhou, 510642, China.
Gong J; Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China.
Zhang Z; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Guangdong Laboratory of Lingnan Modern Agriculture, National Engineering Research Center for Breeding Swine Industry, State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science, South China Agricultural University, Guangzhou, 510642, China. .
Yuan X; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Guangdong Laboratory of Lingnan Modern Agriculture, National Engineering Research Center for Breeding Swine Industry, State Key Laboratory of Swine and Poultry Breeding Industry, College of Animal Science, South China Agricultural University, Guangzhou, 510642, China. .
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Źródło:
Scientific data [Sci Data] 2024 Feb 01; Vol. 11 (1), pp. 157. Date of Electronic Publication: 2024 Feb 01.
Typ publikacji:
Dataset; Journal Article
MeSH Terms:
Enhancer Elements, Genetic*
Transcription, Genetic*
Animals ; Promoter Regions, Genetic ; RNA/genetics ; Swine
Czasopismo naukowe
Tytuł:
Using steady-state formula to estimate time-dependent parameters of stochastic gene transcription models.
Autorzy:
Zhang C; Guangzhou Center for Applied Mathematics, Guangzhou University, Guangzhou, 510006, PR China; College of Mathematics and Information Sciences, Guangzhou University, Guangzhou 51006, China.
Jiao F; Guangzhou Center for Applied Mathematics, Guangzhou University, Guangzhou, 510006, PR China; College of Mathematics and Information Sciences, Guangzhou University, Guangzhou 51006, China. Electronic address: .
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Źródło:
Bio Systems [Biosystems] 2024 Feb; Vol. 236, pp. 105128. Date of Electronic Publication: 2024 Jan 26.
Typ publikacji:
Journal Article
MeSH Terms:
Transcription, Genetic*
RNA*
Stochastic Processes
Czasopismo naukowe
Tytuł:
Transcription-replication interactions reveal bacterial genome regulation.
Autorzy:
Pountain AW; Institute for Systems Genetics, NYU Grossman School of Medicine, New York, NY, USA.
Jiang P; Institute for Systems Genetics, NYU Grossman School of Medicine, New York, NY, USA.; Department of Biology, New York University, New York, NY, USA.
Yao T; Department of Physics, University of Illinois at Urbana Champaign, Urbana, IL, USA.
Homaee E; Department of Physics, University of Illinois at Urbana Champaign, Urbana, IL, USA.; Center for Biophysics and Computational Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Guan Y; Department of Physics, University of Illinois at Urbana Champaign, Urbana, IL, USA.
McDonald KJC; Department of Physics, University of Illinois at Urbana Champaign, Urbana, IL, USA.
Podkowik M; Department of Medicine, Division of Infectious Diseases, NYU Grossman School of Medicine, New York, NY, USA.
Shopsin B; Department of Medicine, Division of Infectious Diseases, NYU Grossman School of Medicine, New York, NY, USA.; Department of Microbiology, NYU Grossman School of Medicine, New York, NY, USA.
Torres VJ; Department of Microbiology, NYU Grossman School of Medicine, New York, NY, USA.; Department of Host-Microbe Interactions, St. Jude Children's Research Hospital, Memphis, TN, USA.
Golding I; Department of Physics, University of Illinois at Urbana Champaign, Urbana, IL, USA.; Department of Microbiology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Yanai I; Institute for Systems Genetics, NYU Grossman School of Medicine, New York, NY, USA. .; Department of Biochemistry and Molecular Pharmacology, NYU Grossman School of Medicine, New York, NY, USA. .
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Źródło:
Nature [Nature] 2024 Feb; Vol. 626 (7999), pp. 661-669. Date of Electronic Publication: 2024 Jan 24.
Typ publikacji:
Journal Article
MeSH Terms:
Bacteria*/genetics
DNA Replication*/genetics
Gene Expression Regulation, Bacterial*
Genome, Bacterial*/genetics
Transcription, Genetic*/genetics
Gene Dosage/genetics ; Gene Regulatory Networks ; Operon/genetics ; Sequence Analysis, RNA ; Chromosomes, Bacterial/genetics
Czasopismo naukowe
Tytuł:
Time will tell: comparing timescales to gain insight into transcriptional bursting.
Autorzy:
Meeussen JVW; Division of Gene Regulation, The Netherlands Cancer Institute, Oncode Institute, Amsterdam 1066CX, The Netherlands.
Lenstra TL; Division of Gene Regulation, The Netherlands Cancer Institute, Oncode Institute, Amsterdam 1066CX, The Netherlands. Electronic address: .
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Źródło:
Trends in genetics : TIG [Trends Genet] 2024 Feb; Vol. 40 (2), pp. 160-174. Date of Electronic Publication: 2024 Jan 12.
Typ publikacji:
Journal Article; Review
MeSH Terms:
Transcription, Genetic*
Gene Expression Regulation*
Promoter Regions, Genetic ; Chromatin Assembly and Disassembly
Czasopismo naukowe
Tytuł:
Acidic growth conditions stabilize the ribosomal RNA gene cluster and extend lifespan through noncoding transcription repression.
Autorzy:
Hasegawa Y; Laboratory of Genome Regeneration, Institute for Quantitative Biosciences (IQB), The University of Tokyo, Bunkyo-ku, Japan.; Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Japan.
Ooka H; Laboratory of Genome Regeneration, Institute for Quantitative Biosciences (IQB), The University of Tokyo, Bunkyo-ku, Japan.; Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Japan.
Wakatsuki T; Laboratory of Genome Regeneration, Institute for Quantitative Biosciences (IQB), The University of Tokyo, Bunkyo-ku, Japan.; Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Japan.; Department of Life Science and Technology, Tokyo Institute of Technology, Midori-ku, Japan.
Sasaki M; Laboratory of Genome Regeneration, Institute for Quantitative Biosciences (IQB), The University of Tokyo, Bunkyo-ku, Japan.
Yamamoto A; Department of Industrial System Engineering, Hachinohe College, Hachinohe, Japan.
Kobayashi T; Laboratory of Genome Regeneration, Institute for Quantitative Biosciences (IQB), The University of Tokyo, Bunkyo-ku, Japan.; Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Japan.; Department of Life Science and Technology, Tokyo Institute of Technology, Midori-ku, Japan.; Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Bunkyo-ku, Japan.
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Źródło:
Genes to cells : devoted to molecular & cellular mechanisms [Genes Cells] 2024 Feb; Vol. 29 (2), pp. 111-130. Date of Electronic Publication: 2023 Dec 08.
Typ publikacji:
Journal Article
MeSH Terms:
Longevity*
Transcription, Genetic*
Animals ; Genes, rRNA ; DNA, Ribosomal/genetics ; Plant Extracts ; Mammals
Czasopismo naukowe
Tytuł:
Increased histone acetylation is the signature of repressed state on the genes transcribed by RNA polymerase III.
Autorzy:
Arimbasseri AG; Centre for Cellular and Molecular Biology, (Council of Scientific and Industrial Research), Uppal Road, Tarnaka, Hyderabad 500007, India.
Shukla A; Centre for Cellular and Molecular Biology, (Council of Scientific and Industrial Research), Uppal Road, Tarnaka, Hyderabad 500007, India.
Pradhan AK; Centre for Cellular and Molecular Biology, (Council of Scientific and Industrial Research), Uppal Road, Tarnaka, Hyderabad 500007, India.
Bhargava P; Centre for Cellular and Molecular Biology, (Council of Scientific and Industrial Research), Uppal Road, Tarnaka, Hyderabad 500007, India. Electronic address: .
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Źródło:
Gene [Gene] 2024 Jan 30; Vol. 893, pp. 147958. Date of Electronic Publication: 2023 Nov 03.
Typ publikacji:
Journal Article
MeSH Terms:
Nucleosomes*/genetics
Transcription, Genetic*
Histones/genetics ; Histones/metabolism ; RNA Polymerase III/genetics ; RNA Polymerase III/metabolism ; Acetylation ; RNA Polymerase II/genetics ; RNA Polymerase II/metabolism ; Saccharomyces cerevisiae/genetics ; Saccharomyces cerevisiae/metabolism
Czasopismo naukowe
Tytuł:
Direct observation of a condensate effect on super-enhancer controlled gene bursting.
Autorzy:
Du M; Department of Biological Physics, Max Planck Institute for Immunobiology and Epigenetics, Freiburg im Breisgau, Baden-Württemberg 79108, Germany.
Stitzinger SH; Department of Biological Physics, Max Planck Institute for Immunobiology and Epigenetics, Freiburg im Breisgau, Baden-Württemberg 79108, Germany.
Spille JH; Department of Biological Physics, Max Planck Institute for Immunobiology and Epigenetics, Freiburg im Breisgau, Baden-Württemberg 79108, Germany.
Cho WK; Department of Biological Physics, Max Planck Institute for Immunobiology and Epigenetics, Freiburg im Breisgau, Baden-Württemberg 79108, Germany.
Lee C; Department of Biological Physics, Max Planck Institute for Immunobiology and Epigenetics, Freiburg im Breisgau, Baden-Württemberg 79108, Germany.
Hijaz M; Department of Biological Physics, Max Planck Institute for Immunobiology and Epigenetics, Freiburg im Breisgau, Baden-Württemberg 79108, Germany.
Quintana A; Department of Biological Physics, Max Planck Institute for Immunobiology and Epigenetics, Freiburg im Breisgau, Baden-Württemberg 79108, Germany.
Cissé II; Department of Biological Physics, Max Planck Institute for Immunobiology and Epigenetics, Freiburg im Breisgau, Baden-Württemberg 79108, Germany. Electronic address: .
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Źródło:
Cell [Cell] 2024 Jan 18; Vol. 187 (2), pp. 331-344.e17. Date of Electronic Publication: 2024 Jan 08.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Gene Expression Regulation*
Super Enhancers*
Transcription, Genetic*
SOXB1 Transcription Factors*/genetics
DNA/genetics ; Enhancer Elements, Genetic ; Animals ; Mice ; Embryonic Stem Cells/metabolism ; Microscopy/methods
Czasopismo naukowe
Tytuł:
p300 is an obligate integrator of combinatorial transcription factor inputs.
Autorzy:
Ferrie JJ; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA; Howard Hughes Medical Institute, University of California, Berkeley, Berkeley, CA 94720, USA.
Karr JP; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Graham TGW; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA; Howard Hughes Medical Institute, University of California, Berkeley, Berkeley, CA 94720, USA.
Dailey GM; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Zhang G; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Tjian R; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA; Howard Hughes Medical Institute, University of California, Berkeley, Berkeley, CA 94720, USA. Electronic address: .
Darzacq X; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA. Electronic address: .
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Źródło:
Molecular cell [Mol Cell] 2024 Jan 18; Vol. 84 (2), pp. 234-243.e4. Date of Electronic Publication: 2023 Dec 29.
Typ publikacji:
Journal Article
MeSH Terms:
Transcription Factors*/genetics
Transcription Factors*/metabolism
Transcription, Genetic*
Gene Expression Regulation ; Histones/metabolism ; Chromatin/genetics
Czasopismo naukowe
Tytuł:
Pathogenic bacteria experience pervasive RNA polymerase backtracking during infection.
Autorzy:
Browning KR; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Merrikh H; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
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Źródło:
MBio [mBio] 2024 Jan 16; Vol. 15 (1), pp. e0273723. Date of Electronic Publication: 2023 Dec 14.
Typ publikacji:
Journal Article
MeSH Terms:
Transcription, Genetic*
DNA-Directed RNA Polymerases*/genetics
DNA-Directed RNA Polymerases*/metabolism
Escherichia coli/genetics ; Bacteria/genetics ; Bacteria/metabolism ; Virulence
Czasopismo naukowe
Tytuł:
Transcription readthrough is prevalent in healthy human tissues and associated with inherent genomic features.
Autorzy:
Caldas P; Associate Laboratory i4HB - Institute for Health and Bioeconomy, NOVA School of Science and Technology, Universidade NOVA de Lisboa, 2829-516, Caparica, Portugal. .; UCIBIO - Applied Molecular Biosciences Unit, Department of Life Sciences, NOVA School of Science and Technology, Universidade NOVA de Lisboa, 2829-516, Caparica, Portugal. .
Luz M; Associate Laboratory i4HB - Institute for Health and Bioeconomy, NOVA School of Science and Technology, Universidade NOVA de Lisboa, 2829-516, Caparica, Portugal.; UCIBIO - Applied Molecular Biosciences Unit, Department of Life Sciences, NOVA School of Science and Technology, Universidade NOVA de Lisboa, 2829-516, Caparica, Portugal.
Baseggio S; Associate Laboratory i4HB - Institute for Health and Bioeconomy, NOVA School of Science and Technology, Universidade NOVA de Lisboa, 2829-516, Caparica, Portugal.; UCIBIO - Applied Molecular Biosciences Unit, Department of Life Sciences, NOVA School of Science and Technology, Universidade NOVA de Lisboa, 2829-516, Caparica, Portugal.
Andrade R; Associate Laboratory i4HB - Institute for Health and Bioeconomy, NOVA School of Science and Technology, Universidade NOVA de Lisboa, 2829-516, Caparica, Portugal.; UCIBIO - Applied Molecular Biosciences Unit, Department of Life Sciences, NOVA School of Science and Technology, Universidade NOVA de Lisboa, 2829-516, Caparica, Portugal.
Sobral D; Associate Laboratory i4HB - Institute for Health and Bioeconomy, NOVA School of Science and Technology, Universidade NOVA de Lisboa, 2829-516, Caparica, Portugal.; UCIBIO - Applied Molecular Biosciences Unit, Department of Life Sciences, NOVA School of Science and Technology, Universidade NOVA de Lisboa, 2829-516, Caparica, Portugal.; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal.
Grosso AR; Associate Laboratory i4HB - Institute for Health and Bioeconomy, NOVA School of Science and Technology, Universidade NOVA de Lisboa, 2829-516, Caparica, Portugal. .; UCIBIO - Applied Molecular Biosciences Unit, Department of Life Sciences, NOVA School of Science and Technology, Universidade NOVA de Lisboa, 2829-516, Caparica, Portugal. .
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Źródło:
Communications biology [Commun Biol] 2024 Jan 15; Vol. 7 (1), pp. 100. Date of Electronic Publication: 2024 Jan 15.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Transcription, Genetic*
MicroRNAs*
Humans ; Genome ; Genomics ; Transcriptome
Czasopismo naukowe
Tytuł:
Quantification and modeling of turnover dynamics of de novo transcripts in Drosophila melanogaster.
Autorzy:
Grandchamp A; Institute for Evolution and Biodiversity, University of Münster, Münster, Germany.
Czuppon P; Institute for Evolution and Biodiversity, University of Münster, Münster, Germany.
Bornberg-Bauer E; Institute for Evolution and Biodiversity, University of Münster, Münster, Germany.; Department of Protein Evolution, Max Planck Institute for Biology, Tübingen, Germany.
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Źródło:
Nucleic acids research [Nucleic Acids Res] 2024 Jan 11; Vol. 52 (1), pp. 274-287.
Typ publikacji:
Journal Article
MeSH Terms:
Drosophila melanogaster*/genetics
Transcription, Genetic*
RNA, Untranslated*/chemistry
RNA, Untranslated*/genetics
RNA, Untranslated*/metabolism
Evolution, Molecular*
Animals ; Humans ; Biological Evolution ; Genome ; Genomics ; RNA ; Geography
Czasopismo naukowe

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