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Wyszukujesz frazę ""Transcription, Genetic"" wg kryterium: Temat


Tytuł :
Molecular determinants for dsDNA translocation by the transcription-repair coupling and evolvability factor Mfd.
Autorzy :
Brugger C; Department of Molecular Biology, Cell Biology and Biochemistry, Brown University, Providence, RI, 02903, USA.
Zhang C; Laboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, CA, 92093, USA.
Suhanovsky MM; Department of Molecular Biology, Cell Biology and Biochemistry, Brown University, Providence, RI, 02903, USA.
Kim DD; Department of Molecular Biology, Cell Biology and Biochemistry, Brown University, Providence, RI, 02903, USA.
Sinclair AN; Department of Molecular Biology, Cell Biology and Biochemistry, Brown University, Providence, RI, 02903, USA.
Lyumkis D; Laboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, CA, 92093, USA.; Department of Computational and Structural Biology, The Scripps Research Institute, La Jolla, CA, 92093, USA.
Deaconescu AM; Department of Molecular Biology, Cell Biology and Biochemistry, Brown University, Providence, RI, 02903, USA. .
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Źródło :
Nature communications [Nat Commun] 2020 Jul 27; Vol. 11 (1), pp. 3740. Date of Electronic Publication: 2020 Jul 27.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
DNA Repair*
Transcription, Genetic*
Bacterial Proteins/*metabolism
DNA/*metabolism
Transcription Factors/*metabolism
Adenosine Triphosphate/metabolism ; Amino Acid Sequence ; Bacterial Proteins/chemistry ; Binding Sites ; DNA/chemistry ; DNA/ultrastructure ; Escherichia coli/metabolism ; Models, Molecular ; Protein Binding ; Protein Domains ; RNA Helicases/metabolism ; Transcription Factors/chemistry
Czasopismo naukowe
Tytuł :
A single P115Q mutation modulates specificity in the Corynebacterium pseudotuberculosis arginine repressor.
Autorzy :
Mariutti RB; Multiuser Center for Biomolecular Innovation, IBILCE/UNESP, São José do Rio Preto, SP, Brazil. Electronic address: .
Hernández-González JE; Department of Physics, IBILCE/UNESP, São José do Rio Preto, SP, Brazil.
Nascimento AFZ; Brazilian Synchrotron Light Laboratory (LNLS), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, SP, Brazil.
de Morais MAB; Brazilian Synchrotron Light Laboratory (LNLS), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, SP, Brazil.
Murakami MT; Brazilian Synchrotron Light Laboratory (LNLS), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, SP, Brazil.
Carareto CMA; Laboratory of Molecular Evolution IBILCE/UNESP, São José do Rio Preto, SP, Brazil.
Arni RK; Multiuser Center for Biomolecular Innovation, IBILCE/UNESP, São José do Rio Preto, SP, Brazil; Department of Physics, IBILCE/UNESP, São José do Rio Preto, SP, Brazil.
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Źródło :
Biochimica et biophysica acta. General subjects [Biochim Biophys Acta Gen Subj] 2020 Jul; Vol. 1864 (7), pp. 129597. Date of Electronic Publication: 2020 Mar 07.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeny*
Transcription, Genetic*
Bacterial Proteins/*genetics
Corynebacterium pseudotuberculosis/*genetics
Repressor Proteins/*genetics
Amino Acid Sequence/genetics ; Arginine/biosynthesis ; Arginine/genetics ; Binding Sites ; DNA, Bacterial/genetics ; Gene Expression Regulation, Bacterial ; Mutation/genetics ; Promoter Regions, Genetic/genetics ; Protein Binding/genetics
Czasopismo naukowe
Tytuł :
Structure-seq2 probing of RNA structure upon amino acid starvation reveals both known and novel RNA switches in Bacillus subtilis .
Autorzy :
Ritchey LE; Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802, USA.
Tack DC; Department of Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA.
Yakhnin H; Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA.; Center for RNA Molecular Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA.
Jolley EA; Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802, USA.; Center for RNA Molecular Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA.
Assmann SM; Department of Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA.
Bevilacqua PC; Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802, USA.; Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA.; Center for RNA Molecular Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA.
Babitzke P; Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA.; Center for RNA Molecular Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA.
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Źródło :
RNA (New York, N.Y.) [RNA] 2020 Oct; Vol. 26 (10), pp. 1431-1447. Date of Electronic Publication: 2020 Jul 01.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Amino Acids/*genetics
Bacillus subtilis/*genetics
Bacterial Proteins/*genetics
RNA, Bacterial/*genetics
Gene Expression Regulation, Bacterial/genetics ; Nucleic Acid Conformation ; RNA Stability/genetics ; Transcription, Genetic/genetics ; Transcriptome/genetics
Czasopismo naukowe
Tytuł :
SPRINT: a Cas13a-based platform for detection of small molecules.
Autorzy :
Iwasaki RS; Department of Biochemistry, University of Colorado, Boulder, CO 80309-0596, USA.
Batey RT; Department of Biochemistry, University of Colorado, Boulder, CO 80309-0596, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2020 Sep 25; Vol. 48 (17), pp. e101.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms :
Bacterial Proteins/*metabolism
Biosensing Techniques/*methods
CRISPR-Associated Proteins/*metabolism
Endodeoxyribonucleases/*metabolism
Enzyme Assays/*methods
Nucleic Acid Synthesis Inhibitors/*analysis
Bacterial Proteins/genetics ; CRISPR-Associated Proteins/genetics ; CRISPR-Cas Systems ; Endodeoxyribonucleases/genetics ; Fluorescent Dyes/chemistry ; Leptotrichia ; Ligands ; Nucleic Acid Synthesis Inhibitors/pharmacology ; Riboswitch ; Rifampin/analysis ; Transcription Factors/metabolism ; Transcription, Genetic/drug effects
SCR Organism :
Leptotrichia wadei
Czasopismo naukowe
Tytuł :
Multiple weak interactions between BvgA~P and ptx promoter DNA strongly activate transcription of pertussis toxin genes in Bordetella pertussis.
Autorzy :
Chen Q; Division of Bacterial, Parasitic, and Allergenic Products, Center For Biologics Evaluation and Research, FDA, Silver Spring, Maryland, United States of America.
Boucher PE; Division of Bacterial, Parasitic, and Allergenic Products, Center For Biologics Evaluation and Research, FDA, Silver Spring, Maryland, United States of America.
Stibitz S; Division of Bacterial, Parasitic, and Allergenic Products, Center For Biologics Evaluation and Research, FDA, Silver Spring, Maryland, United States of America.
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Źródło :
PLoS pathogens [PLoS Pathog] 2020 May 13; Vol. 16 (5), pp. e1008500. Date of Electronic Publication: 2020 May 13 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, U.S. Gov't, P.H.S.
MeSH Terms :
Bacterial Proteins*/genetics
Bacterial Proteins*/metabolism
Bordetella pertussis*/genetics
Bordetella pertussis*/metabolism
DNA, Bacterial*/genetics
DNA, Bacterial*/metabolism
Pertussis Toxin*/biosynthesis
Pertussis Toxin*/genetics
Promoter Regions, Genetic*
Transcription Factors*/genetics
Transcription Factors*/metabolism
Transcription, Genetic*
Adhesins, Bacterial/biosynthesis ; Adhesins, Bacterial/genetics ; Gene Expression Regulation, Bacterial/physiology ; Virulence Factors, Bordetella/biosynthesis ; Virulence Factors, Bordetella/genetics
Czasopismo naukowe
Tytuł :
Transcription in the acetoin catabolic pathway is regulated by AcoR and CcpA in Bacillus thuringiensis.
Autorzy :
Peng Q; State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China. Electronic address: .
Zhao X; College of Life Sciences, Northeast Agriculture University, Harbin, China.
Wen J; College of Life Sciences, Northeast Agriculture University, Harbin, China.
Huang M; College of Life Sciences, Northeast Agriculture University, Harbin, China.
Zhang J; State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China.
Song F; State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China. Electronic address: .
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Źródło :
Microbiological research [Microbiol Res] 2020 May; Vol. 235, pp. 126438. Date of Electronic Publication: 2020 Feb 12.
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression Regulation, Bacterial*
Multigene Family*
Transcription, Genetic*
Acetoin/*metabolism
Bacillus thuringiensis/*genetics
Bacterial Proteins/*genetics
Bacillus thuringiensis/metabolism ; Metabolic Networks and Pathways/genetics ; Operon
Czasopismo naukowe
Tytuł :
Four paralogous Gfh factors in the extremophilic bacterium Deinococcus peraridilitoris have distinct effects on various steps of transcription.
Autorzy :
Agapov A; Institute of Molecular Genetics, Russian Academy of Sciences, Moscow, 123182, Russia. Electronic address: .
Kulbachinskiy A; Institute of Molecular Genetics, Russian Academy of Sciences, Moscow, 123182, Russia. Electronic address: .
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Źródło :
Biochimie [Biochimie] 2020 Mar; Vol. 170, pp. 21-25. Date of Electronic Publication: 2019 Dec 13.
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression Regulation, Bacterial*
Transcription, Genetic*
Bacterial Proteins/*metabolism
DNA-Directed RNA Polymerases/*metabolism
Deinococcus/*genetics
RNA, Bacterial/*genetics
Amino Acid Sequence ; Bacterial Proteins/classification ; Bacterial Proteins/genetics ; DNA-Directed RNA Polymerases/genetics ; Deinococcus/growth & development ; Deinococcus/metabolism ; Nucleic Acid Conformation ; RNA Cleavage ; Sequence Homology
SCR Organism :
Deinococcus peraridilitoris
Czasopismo naukowe
Tytuł :
Antitermination protein P7 of bacteriophage Xp10 distinguishes different types of transcriptional pausing by bacterial RNA polymerase.
Autorzy :
Prostova M; Institute of Molecular Genetics, Russian Academy of Sciences, Moscow, 123182, Russia.
Kulbachinskiy A; Institute of Molecular Genetics, Russian Academy of Sciences, Moscow, 123182, Russia. Electronic address: .
Esyunina D; Institute of Molecular Genetics, Russian Academy of Sciences, Moscow, 123182, Russia. Electronic address: .
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Źródło :
Biochimie [Biochimie] 2020 Mar; Vol. 170, pp. 57-64. Date of Electronic Publication: 2019 Dec 26.
Typ publikacji :
Journal Article
MeSH Terms :
Transcription, Genetic*
Bacterial Proteins/*metabolism
Bacteriophages/*metabolism
DNA-Directed RNA Polymerases/*metabolism
RNA, Bacterial/*genetics
Viral Proteins/*metabolism
Xanthomonas/*enzymology
Bacterial Proteins/genetics ; DNA-Directed RNA Polymerases/genetics ; RNA, Bacterial/metabolism ; Viral Proteins/genetics
Czasopismo naukowe
Tytuł :
ChIP-seq analysis of Brucella reveals transcriptional regulation of GntR.
Autorzy :
Li Z; College of Biology and Food, Shangqiu Normal University, Shangqiu, China.
Li M; College of Animal Science and Technology, Shihezi University, Shihezi, China.
Zhang H; College of Animal Science and Technology, Shihezi University, Shihezi, China.
Wang S; College of Biology and Food, Shangqiu Normal University, Shangqiu, China.
Xi L; College of Biology and Food, Shangqiu Normal University, Shangqiu, China.
Zhang X; College of Biology and Food, Shangqiu Normal University, Shangqiu, China.
Yi J; College of Animal Science and Technology, Shihezi University, Shihezi, China.
Zhang H; College of Animal Science and Technology, Shihezi University, Shihezi, China.
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Źródło :
Journal of basic microbiology [J Basic Microbiol] 2020 Feb; Vol. 60 (2), pp. 149-157. Date of Electronic Publication: 2019 Nov 14.
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression Regulation, Bacterial*
Transcription, Genetic*
Bacterial Proteins/*genetics
Brucella abortus/*genetics
DNA-Binding Proteins/*genetics
Animals ; Brucella abortus/pathogenicity ; Chromatin Immunoprecipitation ; DNA-Binding Proteins/metabolism ; High-Throughput Nucleotide Sequencing ; Macrophages/microbiology ; Mice ; RAW 264.7 Cells ; Virulence/genetics
Czasopismo naukowe
Tytuł :
NarL, a Novel Repressor for CYP108j1 Expression during PAHs Degradation in Rhodococcus sp. P14.
Autorzy :
Kan J; Department of Biology, Shantou University, Shantou 515063, China.
Peng T; Department of Biology, Shantou University, Shantou 515063, China.
Huang T; Department of Biology, Shantou University, Shantou 515063, China.
Xiong G; Institute of Toxicology and Pharmacology for Natural Scientists, University Medical School Schleswig-Holstein, 24103 Kiel, Germany.
Hu Z; Department of Biology, Shantou University, Shantou 515063, China.
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Źródło :
International journal of molecular sciences [Int J Mol Sci] 2020 Feb 01; Vol. 21 (3). Date of Electronic Publication: 2020 Feb 01.
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression Regulation, Bacterial*
Transcription, Genetic*
Bacterial Proteins/*metabolism
Cytochrome P-450 Enzyme System/*metabolism
Polycyclic Aromatic Hydrocarbons/*metabolism
Repressor Proteins/*metabolism
Rhodococcus/*metabolism
Bacterial Proteins/genetics ; Base Sequence ; Cytochrome P-450 Enzyme System/genetics ; Operon ; Promoter Regions, Genetic ; Repressor Proteins/genetics ; Rhodococcus/genetics ; Rhodococcus/growth & development
Czasopismo naukowe
Tytuł :
sRNA EsrE Is Transcriptionally Regulated by the Ferric Uptake Regulator Fur in Escherichia coli .
Autorzy :
Hou B; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, P.R. China.; Department of Applied Biology, East China University of Science and Technology, Shanghai, P.R. China.
Yang X; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, P.R. China.
Xia H; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, P.R. China.
Wu H; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, P.R. China.; Department of Applied Biology, East China University of Science and Technology, Shanghai, P.R. China.
Ye J; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, P.R. China.; Department of Applied Biology, East China University of Science and Technology, Shanghai, P.R. China.
Zhang H; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, P.R. China.; Department of Applied Biology, East China University of Science and Technology, Shanghai, P.R. China.
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Źródło :
Journal of microbiology and biotechnology [J Microbiol Biotechnol] 2020 Jan 28; Vol. 30 (1), pp. 127-135.
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression Regulation, Bacterial*
Promoter Regions, Genetic*
Transcription, Genetic*
Bacterial Proteins/*genetics
Escherichia coli/*genetics
RNA, Bacterial/*genetics
Repressor Proteins/*genetics
Czasopismo naukowe
Tytuł :
Extremely Low Leakage Expression Systems Using Dual Transcriptional-Translational Control for Toxic Protein Production.
Autorzy :
Kato Y; Division of Biotechnology, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO), Oowashi 1-2, Tsukuba, Ibaraki 305-8634, Japan.
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Źródło :
International journal of molecular sciences [Int J Mol Sci] 2020 Jan 21; Vol. 21 (3). Date of Electronic Publication: 2020 Jan 21.
Typ publikacji :
Journal Article; Review
MeSH Terms :
Gene Expression Regulation, Bacterial*
Protein Processing, Post-Translational*
Transcription, Genetic*
Bacterial Proteins/*biosynthesis
Bacterial Proteins/*genetics
Bacterial Proteins/toxicity ; Escherichia coli/genetics ; Escherichia coli/metabolism ; Genes, Bacterial ; Plasmids ; Protein Biosynthesis/genetics ; Protein Biosynthesis/physiology ; RNA, Antisense/metabolism ; RNA, Catalytic/metabolism ; Riboswitch
Czasopismo naukowe
Tytuł :
Characterization of Cas12a nucleases reveals diverse PAM profiles between closely-related orthologs.
Autorzy :
Jacobsen T; Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC 27695, USA.
Ttofali F; Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC 27695, USA.
Liao C; Helmholtz Institute for RNA-based Infection Research (HIRI), Helmholtz-Centre for Infection Research (HZI), 97080 Würzburg, Germany.
Manchalu S; Helmholtz Institute for RNA-based Infection Research (HIRI), Helmholtz-Centre for Infection Research (HZI), 97080 Würzburg, Germany.
Gray BN; Benson Hill, St. Louis, MO, 63132, USA.
Beisel CL; Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC 27695, USA.; Helmholtz Institute for RNA-based Infection Research (HIRI), Helmholtz-Centre for Infection Research (HZI), 97080 Würzburg, Germany.; Medical Faculty, University of Würzburg, 97080 Würzburg, Germany.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2020 Jun 04; Vol. 48 (10), pp. 5624-5638.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Bacterial Proteins/*metabolism
CRISPR-Associated Proteins/*metabolism
Endodeoxyribonucleases/*metabolism
Bacterial Proteins/chemistry ; Bacterial Proteins/classification ; Bacterial Proteins/genetics ; CRISPR-Associated Proteins/chemistry ; CRISPR-Associated Proteins/classification ; CRISPR-Associated Proteins/genetics ; DNA Cleavage ; Endodeoxyribonucleases/chemistry ; Endodeoxyribonucleases/classification ; Endodeoxyribonucleases/genetics ; HEK293 Cells ; Humans ; Mutation ; Phylogeny ; Prevotella/enzymology ; Protein Biosynthesis ; Protein Domains ; Transcription, Genetic
Czasopismo naukowe
Tytuł :
AccR, a TetR Family Transcriptional Repressor, Coordinates Short-Chain Acyl Coenzyme A Homeostasis in Streptomyces avermitilis .
Autorzy :
Lyu M; State Key Laboratory of Agrobiotechnology and Key Laboratory of Soil Microbiology, Ministry of Agriculture, College of Biological Sciences, China Agricultural University, Beijing, China.
Cheng Y; State Key Laboratory of Agrobiotechnology and Key Laboratory of Soil Microbiology, Ministry of Agriculture, College of Biological Sciences, China Agricultural University, Beijing, China.
Han X; State Key Laboratory of Agrobiotechnology and Key Laboratory of Soil Microbiology, Ministry of Agriculture, College of Biological Sciences, China Agricultural University, Beijing, China.
Wen Y; State Key Laboratory of Agrobiotechnology and Key Laboratory of Soil Microbiology, Ministry of Agriculture, College of Biological Sciences, China Agricultural University, Beijing, China.
Song Y; State Key Laboratory of Agrobiotechnology and Key Laboratory of Soil Microbiology, Ministry of Agriculture, College of Biological Sciences, China Agricultural University, Beijing, China.
Li J; State Key Laboratory of Agrobiotechnology and Key Laboratory of Soil Microbiology, Ministry of Agriculture, College of Biological Sciences, China Agricultural University, Beijing, China.
Chen Z; State Key Laboratory of Agrobiotechnology and Key Laboratory of Soil Microbiology, Ministry of Agriculture, College of Biological Sciences, China Agricultural University, Beijing, China .
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Źródło :
Applied and environmental microbiology [Appl Environ Microbiol] 2020 Jun 02; Vol. 86 (12). Date of Electronic Publication: 2020 Jun 02 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Acyl Coenzyme A/*metabolism
Bacterial Proteins/*genetics
Carbon-Carbon Ligases/*genetics
Streptomyces/*physiology
Bacterial Proteins/metabolism ; Base Sequence ; Carbon-Carbon Ligases/metabolism ; Homeostasis ; Sequence Alignment ; Streptomyces/enzymology ; Streptomyces/genetics ; Transcription, Genetic
SCR Organism :
Streptomyces avermitilis
Czasopismo naukowe
Tytuł :
Transcriptional response to metal starvation in the emerging pathogen Mycoplasma genitalium is mediated by Fur-dependent and -independent regulatory pathways.
Autorzy :
Martínez-Torró C; Institut de Biotecnologia i Biomedicina and Departament de Bioquímica i Biologia Molecular, Universitat Autònoma de Barcelona, Barcelona, Spain.
Torres-Puig S; Institut de Biotecnologia i Biomedicina and Departament de Bioquímica i Biologia Molecular, Universitat Autònoma de Barcelona, Barcelona, Spain.
Monge M; Vall d'Hebron Institute of Oncology (VHIO), Barcelona, Spain.
Sánchez-Alba L; Institut de Biotecnologia i Biomedicina and Departament de Bioquímica i Biologia Molecular, Universitat Autònoma de Barcelona, Barcelona, Spain.
González-Martín M; Institut de Biotecnologia i Biomedicina and Departament de Bioquímica i Biologia Molecular, Universitat Autònoma de Barcelona, Barcelona, Spain.
Marcos-Silva M; Institut de Biotecnologia i Biomedicina and Departament de Bioquímica i Biologia Molecular, Universitat Autònoma de Barcelona, Barcelona, Spain.
Perálvarez-Marín A; Biophysics Unit, Department of Biochemistry and Molecular Biology, School of Medicine, Universitat Autònoma de Barcelona, Barcelona, Spain.
Canals F; Vall d'Hebron Institute of Oncology (VHIO), Barcelona, Spain.
Querol E; Institut de Biotecnologia i Biomedicina and Departament de Bioquímica i Biologia Molecular, Universitat Autònoma de Barcelona, Barcelona, Spain.
Piñol J; Institut de Biotecnologia i Biomedicina and Departament de Bioquímica i Biologia Molecular, Universitat Autònoma de Barcelona, Barcelona, Spain.
Pich OQ; Institut de Biotecnologia i Biomedicina and Departament de Bioquímica i Biologia Molecular, Universitat Autònoma de Barcelona, Barcelona, Spain.
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Źródło :
Emerging microbes & infections [Emerg Microbes Infect] 2019 Dec 20; Vol. 9 (1), pp. 5-19. Date of Electronic Publication: 2019 Dec 20 (Print Publication: 2020).
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression Regulation, Bacterial*/drug effects
Transcription, Genetic*/drug effects
Bacterial Proteins/*metabolism
Iron/*metabolism
Mycoplasma genitalium/*metabolism
Repressor Proteins/*metabolism
2,2'-Dipyridyl/pharmacology ; Amino Acid Sequence ; Bacterial Proteins/chemistry ; Homeostasis ; Models, Molecular ; Mycoplasma genitalium/genetics ; Promoter Regions, Genetic ; Proteomics ; Repressor Proteins/chemistry
Czasopismo naukowe
Tytuł :
Gre-family factors modulate DNA damage sensing by Deinococcus radiodurans RNA polymerase.
Autorzy :
Agapov A; Institute of Molecular Genetics, Russian Academy of Sciences, Moscow, Russia.
Esyunina D; Institute of Molecular Genetics, Russian Academy of Sciences, Moscow, Russia.
Kulbachinskiy A; Institute of Molecular Genetics, Russian Academy of Sciences, Moscow, Russia.
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Źródło :
RNA biology [RNA Biol] 2019 Dec; Vol. 16 (12), pp. 1711-1720. Date of Electronic Publication: 2019 Aug 21.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
DNA Repair*
Gene Expression Regulation, Bacterial*
Transcription, Genetic*
Bacterial Proteins/*genetics
DNA, Bacterial/*genetics
DNA-Directed RNA Polymerases/*genetics
Deinococcus/*genetics
Bacterial Proteins/metabolism ; Base Pairing ; Base Sequence ; Cations, Divalent ; DNA Damage ; DNA, Bacterial/metabolism ; DNA-Directed RNA Polymerases/metabolism ; Deinococcus/metabolism ; Manganese/metabolism ; Transcription Factors/genetics ; Transcription Factors/metabolism
Czasopismo naukowe
Tytuł :
Serotype-shifting gene rfbT is a direct transcriptional target of cAMP receptor protein (CRP) in V. cholerae O1.
Autorzy :
Li J; National Institute for Communicable Disease Control and Prevention, and State Key Laboratory for Infectious Disease Prevention and Control, Chinese Centre for Disease Control and Prevention, Changping, Beijing, China.
Lu S; National Institute for Communicable Disease Control and Prevention, and State Key Laboratory for Infectious Disease Prevention and Control, Chinese Centre for Disease Control and Prevention, Changping, Beijing, China. Electronic address: .
Kan B; National Institute for Communicable Disease Control and Prevention, and State Key Laboratory for Infectious Disease Prevention and Control, Chinese Centre for Disease Control and Prevention, Changping, Beijing, China; Collaborative Innovation Centre for Diagnosis and Treatment of Infectious Diseases, Hangzhou, China.
Liang W; National Institute for Communicable Disease Control and Prevention, and State Key Laboratory for Infectious Disease Prevention and Control, Chinese Centre for Disease Control and Prevention, Changping, Beijing, China; Collaborative Innovation Centre for Diagnosis and Treatment of Infectious Diseases, Hangzhou, China. Electronic address: .
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Źródło :
Biochemical and biophysical research communications [Biochem Biophys Res Commun] 2019 Nov 19; Vol. 519 (4), pp. 874-879. Date of Electronic Publication: 2019 Sep 25.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Gene Expression Regulation, Bacterial*
Transcription, Genetic*
Bacterial Proteins/*genetics
Cyclic AMP Receptor Protein/*genetics
Vibrio cholerae/*genetics
Bacterial Proteins/metabolism ; Binding Sites/genetics ; Cholera/microbiology ; Cyclic AMP/metabolism ; Cyclic AMP Receptor Protein/metabolism ; Promoter Regions, Genetic/genetics ; Serogroup ; Vibrio cholerae/classification ; Vibrio cholerae/metabolism
Czasopismo naukowe
Tytuł :
Nusbiarylins, a new class of antimicrobial agents: Rational design of bacterial transcription inhibitors targeting the interaction between the NusB and NusE proteins.
Autorzy :
Qiu Y; The Hong Kong Polytechnic University Shenzhen Research Institute, Shenzhen, China; State Key Laboratory of Chemical Biology and Drug Discovery, Department of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University, Kowloon, Hong Kong Special Administrative Region.
Chan ST; The Hong Kong Polytechnic University Shenzhen Research Institute, Shenzhen, China; State Key Laboratory of Chemical Biology and Drug Discovery, Department of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University, Kowloon, Hong Kong Special Administrative Region.
Lin L; Department of Microbiology, The Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, Hong Kong Special Administrative Region.
Shek TL; School of Pharmacy, Faculty of Medicine, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong Special Administrative Region.
Tsang TF; Department of Microbiology, The Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, Hong Kong Special Administrative Region.
Zhang Y; School of Pharmacy, Faculty of Medicine, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong Special Administrative Region.
Ip M; Department of Microbiology, The Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, Hong Kong Special Administrative Region.
Chan PK; Department of Microbiology, The Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, Hong Kong Special Administrative Region; Stanley Ho Centre for Emerging Infectious Diseases, The Chinese University of Hong Kong, Shatin, Hong Kong Special Administrative Region.
Blanchard N; Université de Haute-Alsace, Université de Strasbourg, CNRS, LIMA, UMR 7042, Mulhouse 68000, France.
Hanquet G; Laboratoire d'Innovation Moléculaire et Applications, ECPM, UMR 7042, Université de Strasbourg/Université de Haute-Alsace, CNRS, 67000 Strasbourg, France.
Zuo Z; School of Pharmacy, Faculty of Medicine, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong Special Administrative Region. Electronic address: .
Yang X; Department of Microbiology, The Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, Hong Kong Special Administrative Region. Electronic address: .
Ma C; The Hong Kong Polytechnic University Shenzhen Research Institute, Shenzhen, China; State Key Laboratory of Chemical Biology and Drug Discovery, Department of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University, Kowloon, Hong Kong Special Administrative Region. Electronic address: .
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Źródło :
Bioorganic chemistry [Bioorg Chem] 2019 Nov; Vol. 92, pp. 103203. Date of Electronic Publication: 2019 Aug 16.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Drug Design*
Anti-Bacterial Agents/*pharmacology
Bacteria/*drug effects
Bacterial Proteins/*antagonists & inhibitors
Transcription, Genetic/*drug effects
A549 Cells ; Anti-Bacterial Agents/chemical synthesis ; Anti-Bacterial Agents/chemistry ; Bacteria/genetics ; Bacteria/metabolism ; Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; Caco-2 Cells ; Cell Line ; Dose-Response Relationship, Drug ; Humans ; Microbial Sensitivity Tests ; Molecular Structure ; Structure-Activity Relationship ; Transcription, Genetic/genetics
Czasopismo naukowe
Tytuł :
RNA polymerases as moving barriers to condensin loop extrusion.
Autorzy :
Brandão HB; Graduate Program in Biophysics, Harvard University, Cambridge, MA 02138.
Paul P; Department of Biology, Indiana University, Bloomington, IN 47405.
van den Berg AA; Institute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA 02139.
Rudner DZ; Department of Microbiology and Immunobiology, Harvard Medical School, Boston, MA 02115.
Wang X; Department of Biology, Indiana University, Bloomington, IN 47405; .
Mirny LA; Graduate Program in Biophysics, Harvard University, Cambridge, MA 02138; .; Institute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA 02139.; Department of Physics, Massachusetts Institute of Technology, Cambridge, MA 02139.
Pokaż więcej
Źródło :
Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2019 Oct 08; Vol. 116 (41), pp. 20489-20499. Date of Electronic Publication: 2019 Sep 23.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Chromosomes, Bacterial*
Genome, Bacterial*
Transcription, Genetic*
Adenosine Triphosphatases/*metabolism
Bacillus subtilis/*metabolism
Bacterial Proteins/*metabolism
DNA-Binding Proteins/*metabolism
DNA-Directed RNA Polymerases/*metabolism
Multiprotein Complexes/*metabolism
RNA, Ribosomal/*metabolism
Adenosine Triphosphatases/chemistry ; Adenosine Triphosphatases/genetics ; Bacillus subtilis/genetics ; Bacterial Proteins/chemistry ; Bacterial Proteins/genetics ; DNA-Binding Proteins/chemistry ; DNA-Binding Proteins/genetics ; DNA-Directed RNA Polymerases/chemistry ; DNA-Directed RNA Polymerases/genetics ; Multiprotein Complexes/chemistry ; Multiprotein Complexes/genetics ; Protein Binding ; RNA, Ribosomal/chemistry ; RNA, Ribosomal/genetics
Czasopismo naukowe
Tytuł :
Transcription-Coupled Repair: From Cells to Single Molecules and Back Again.
Autorzy :
Strick TR; Institut Jacques Monod, CNRS and Université Paris 7, Paris Université, Paris, France; Institut de Biologie de l'Ecole normale supérieure, PSL Université, INSERM, CNRS, Paris, France; Equipe Labellisée de la Ligue Nationale Contre le Cancer, Paris, France; Horizons 2020 Innovative Training Network, DNAREPAIRMAN, Paris, France. Electronic address: .
Portman JR; Institut Jacques Monod, CNRS and Université Paris 7, Paris Université, Paris, France; Institut de Biologie de l'Ecole normale supérieure, PSL Université, INSERM, CNRS, Paris, France; Horizons 2020 Innovative Training Network, DNAREPAIRMAN, Paris, France.
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Źródło :
Journal of molecular biology [J Mol Biol] 2019 Sep 20; Vol. 431 (20), pp. 4093-4102. Date of Electronic Publication: 2019 Jun 06.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Review
MeSH Terms :
DNA Repair*
Transcription, Genetic*
Bacteria/*genetics
Bacteria/*metabolism
Bacterial Proteins/*metabolism
Transcription Factors/*metabolism
DNA Repair Enzymes/metabolism ; DNA-Directed RNA Polymerases/metabolism ; Protein Binding ; Protein Multimerization
Czasopismo naukowe

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