Temat: "Transcription Initiation Site" - OpacWWW

Skocz do pozycji: 1.

Tytuł:: Light-inducible carotenoid production controlled by a MarR-type regulator in Corynebacterium glutamicum.
Autorzy:: Sumi S; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Suzuki Y; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Matsuki T; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Yamamoto T; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Tsuruta Y; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Mise K; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Kawamura T; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Ito Y; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Shimada Y; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Watanabe E; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Watanabe S; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Toriyabe M; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Takano Shiratori H; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Ueda K; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan.
Takano H; Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, 252-0880, Japan. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2019 Sep 11; Vol. 9 (1), pp. 13136. Date of Electronic Publication: 2019 Sep 11.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Light*
Bacterial Proteins/*genetics
Carotenoids/*metabolism
Corynebacterium glutamicum/*genetics
Gene Expression Regulation, Bacterial/*radiation effects
Transcription, Genetic/*radiation effects
Amino Acid Sequence ; Bacterial Proteins/metabolism ; Base Sequence ; Corynebacterium glutamicum/metabolism ; Multigene Family/genetics ; Promoter Regions, Genetic/genetics ; Reverse Transcriptase Polymerase Chain Reaction ; Transcription Initiation Site

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Skocz do pozycji: 2.

Tytuł:: The novel EHEC gene asa overlaps the TEGT transporter gene in antisense and is regulated by NaCl and growth phase.
Autorzy:: Vanderhaeghen S; Lehrstuhl für Mikrobielle Ökologie, Wissenschaftszentrum Weihenstephan, Technische Universität München, Weihenstephaner Berg 3, 85354, Freising, Germany.
Zehentner B; Lehrstuhl für Mikrobielle Ökologie, Wissenschaftszentrum Weihenstephan, Technische Universität München, Weihenstephaner Berg 3, 85354, Freising, Germany.
Scherer S; Lehrstuhl für Mikrobielle Ökologie, Wissenschaftszentrum Weihenstephan, Technische Universität München, Weihenstephaner Berg 3, 85354, Freising, Germany.; ZIEL - Institute for Food & Health, Technische Universität München, Freising, Germany.
Neuhaus K; Lehrstuhl für Mikrobielle Ökologie, Wissenschaftszentrum Weihenstephan, Technische Universität München, Weihenstephaner Berg 3, 85354, Freising, Germany. .; Core Facility Microbiome/NGS, ZIEL - Institute for Food & Health, Technische Universität München, Weihenstephaner Berg 3, 85354, Freising, Germany. .
Ardern Z; Lehrstuhl für Mikrobielle Ökologie, Wissenschaftszentrum Weihenstephan, Technische Universität München, Weihenstephaner Berg 3, 85354, Freising, Germany.; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2018 Dec 14; Vol. 8 (1), pp. 17875. Date of Electronic Publication: 2018 Dec 14.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Regulation, Bacterial*
Escherichia coli O157/*genetics
Escherichia coli Proteins/*biosynthesis
Membrane Proteins/*biosynthesis
Sodium Chloride/*metabolism
Arginine/metabolism ; Blotting, Western ; Escherichia coli O157/growth & development ; Escherichia coli O157/metabolism ; Escherichia coli Proteins/genetics ; Gene Expression Profiling ; Membrane Proteins/genetics ; Promoter Regions, Genetic ; Real-Time Polymerase Chain Reaction ; Reverse Transcriptase Polymerase Chain Reaction ; Transcription Initiation Site

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Skocz do pozycji: 3.

Tytuł:: Molecular biology. Molecular basis of transcription pausing.
Autorzy:: Roberts JW; Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA. .; Pokaż więcej
Źródło:: Science (New York, N.Y.) [Science] 2014 Jun 13; Vol. 344 (6189), pp. 1226-7.
Typ publikacji:: Journal Article; Comment
MeSH Terms:: Gene Expression Regulation, Bacterial*
Regulatory Elements, Transcriptional*
Transcription Elongation, Genetic*
Transcription Initiation Site*
Transcription Initiation, Genetic*
Transcription, Genetic*
Codon, Initiator/*genetics
DNA-Directed RNA Polymerases/*metabolism
Escherichia coli/*genetics
Escherichia coli/*metabolism
Peptide Chain Initiation, Translational/*genetics

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Skocz do pozycji: 4.

Tytuł:: Interactions between RNA polymerase and the "core recognition element" counteract pausing.
Autorzy:: Vvedenskaya IO; Department of Genetics and Waksman Institute, Rutgers University, Piscataway, NJ 08854, USA.
Vahedian-Movahed H; Department of Chemistry and Waksman Institute, Rutgers University, Piscataway, NJ 08854, USA.
Bird JG; Department of Genetics and Waksman Institute, Rutgers University, Piscataway, NJ 08854, USA. Department of Chemistry and Waksman Institute, Rutgers University, Piscataway, NJ 08854, USA.
Knoblauch JG; Department of Genetics and Waksman Institute, Rutgers University, Piscataway, NJ 08854, USA.
Goldman SR; Department of Genetics and Waksman Institute, Rutgers University, Piscataway, NJ 08854, USA.
Zhang Y; Department of Chemistry and Waksman Institute, Rutgers University, Piscataway, NJ 08854, USA.
Ebright RH; Department of Chemistry and Waksman Institute, Rutgers University, Piscataway, NJ 08854, USA. .
Nickels BE; Department of Genetics and Waksman Institute, Rutgers University, Piscataway, NJ 08854, USA. .; Pokaż więcej
Źródło:: Science (New York, N.Y.) [Science] 2014 Jun 13; Vol. 344 (6189), pp. 1285-9.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:: Gene Expression Regulation, Bacterial*
Transcription Elongation, Genetic*
Transcription Initiation Site*
Transcription Initiation, Genetic*
DNA-Directed RNA Polymerases/*metabolism
Escherichia coli/*genetics
DNA-Directed RNA Polymerases/chemistry ; DNA-Directed RNA Polymerases/genetics ; Genome, Bacterial/genetics ; Phosphoric Monoester Hydrolases/chemistry ; Phosphoric Monoester Hydrolases/metabolism

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Skocz do pozycji: 5.

Tytuł:: Transcriptional Regulation of the β-Type Carbonic Anhydrase Gene bca by RamA in Corynebacterium glutamicum.
Autorzy:: Shah A; Institute of Microbiology and Biotechnology, University of Ulm, D-89069 Ulm, Germany.
Eikmanns BJ; Institute of Microbiology and Biotechnology, University of Ulm, D-89069 Ulm, Germany.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2016 Apr 27; Vol. 11 (4), pp. e0154382. Date of Electronic Publication: 2016 Apr 27 (Print Publication: 2016).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Regulation, Bacterial*
Transcription, Genetic*
Bacterial Proteins/*genetics
Carbonic Anhydrases/*genetics
Corynebacterium glutamicum/*genetics
Transcription Factors/*genetics
Acetates/metabolism ; Bacterial Proteins/metabolism ; Base Sequence ; Binding Sites ; Carbonic Anhydrases/metabolism ; Codon, Initiator ; Corynebacterium glutamicum/metabolism ; Gene Deletion ; Glucose/metabolism ; Promoter Regions, Genetic ; Protein Binding ; Transcription Factors/metabolism ; Transcription Initiation Site

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Skocz do pozycji: 6.

Tytuł:: NanR, a Transcriptional Regulator That Binds to the Promoters of Genes Involved in Sialic Acid Metabolism in the Anaerobic Pathogen Clostridium perfringens.
Autorzy:: Therit B; Department of Biological Sciences, Virginia Tech, Blacksburg, Virginia, United States of America.
Cheung JK; Department of Microbiology, Monash University, Clayton, VIC, Australia.
Rood JI; Department of Microbiology, Monash University, Clayton, VIC, Australia.
Melville SB; Department of Biological Sciences, Virginia Tech, Blacksburg, Virginia, United States of America.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2015 Jul 21; Vol. 10 (7), pp. e0133217. Date of Electronic Publication: 2015 Jul 21 (Print Publication: 2015).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Gene Expression Regulation, Bacterial*
Bacterial Proteins/*genetics
Clostridium Infections/*microbiology
Clostridium perfringens/*enzymology
Clostridium perfringens/*genetics
N-Acetylneuraminic Acid/*metabolism
Neuraminidase/*genetics
Bacterial Proteins/metabolism ; Base Sequence ; Clostridium perfringens/growth & development ; Clostridium perfringens/metabolism ; Genes, Bacterial ; Humans ; Molecular Sequence Data ; Neuraminidase/metabolism ; Operon ; Promoter Regions, Genetic ; Transcription Initiation Site ; Virulence Factors/genetics ; Virulence Factors/metabolism

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Skocz do pozycji: 7.

Tytuł:: The TyrR transcription factor regulates the divergent akr-ipdC operons of Enterobacter cloacae UW5.
Autorzy:: Coulson TJ; Department of Biology, University of New Brunswick, Fredericton, Canada.
Patten CL; Department of Biology, University of New Brunswick, Fredericton, Canada.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2015 Mar 26; Vol. 10 (3), pp. e0121241. Date of Electronic Publication: 2015 Mar 26 (Print Publication: 2015).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Regulation, Bacterial*
Operon*
Bacterial Proteins/*genetics
Bacterial Proteins/*metabolism
Enterobacter cloacae/*genetics
Enterobacter cloacae/*metabolism
Transcription Factors/*metabolism
Amino Acids, Aromatic/metabolism ; Base Sequence ; Binding Sites ; Chromosome Mapping ; Gene Expression ; Gene Order ; Genes, Reporter ; Molecular Sequence Data ; Mutagenesis, Site-Directed ; Promoter Regions, Genetic ; Protein Binding ; Sequence Alignment ; Transcription Initiation Site

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Skocz do pozycji: 8.

Tytuł:: PAS-LuxR transcriptional control of filipin biosynthesis in S. avermitilis.
Autorzy:: Vicente CM; Area de Microbiología, Facultad de Biología, Universidad de León, Campus de Vegazana s/n, 24071, León, Spain.
Santos-Aberturas J
Payero TD
Barreales EG
de Pedro A
Aparicio JF; Pokaż więcej
Źródło:: Applied microbiology and biotechnology [Appl Microbiol Biotechnol] 2014 Nov; Vol. 98 (22), pp. 9311-24. Date of Electronic Publication: 2014 Aug 09.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Regulation, Bacterial*
Filipin/*biosynthesis
Streptomyces/*genetics
Streptomyces/*metabolism
Transcription Factors/*metabolism
DNA, Bacterial/metabolism ; Electrophoretic Mobility Shift Assay ; Gene Deletion ; Gene Expression Profiling ; Genetic Complementation Test ; Protein Binding ; Real-Time Polymerase Chain Reaction ; Transcription Factors/genetics ; Transcription Initiation Site

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Skocz do pozycji: 9.

Tytuł:: Pervasive transcription: illuminating the dark matter of bacterial transcriptomes.
Autorzy:: Wade JT; Wadsworth Center, New York State Department of Health, Albany, New York 12208, USA, and the Department of Biomedical Sciences, University at Albany-State University of New York, Albany, New York 12201, USA.
Grainger DC; Institute of Microbiology and Infection, School of Biosciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.; Pokaż więcej
Źródło:: Nature reviews. Microbiology [Nat Rev Microbiol] 2014 Sep; Vol. 12 (9), pp. 647-53. Date of Electronic Publication: 2014 Jul 28.
Typ publikacji:: Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Review
MeSH Terms:: Gene Expression Regulation, Bacterial*
Transcription, Genetic*
Transcriptome*
Bacteria/*genetics
Genome, Bacterial/*genetics
RNA, Antisense/*genetics
Bacterial Proteins/genetics ; Evolution, Molecular ; RNA Stability ; RNA, Bacterial/genetics ; RNA, Messenger/genetics ; RNA, Untranslated/genetics ; Transcription Initiation Site

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Skocz do pozycji: 10.

Tytuł:: The superintegron integrase and the cassette promoters are co-regulated in Vibrio cholerae.
Autorzy:: Krin E; Institut Pasteur, Unité de Plasticité du Génome Bactérien, Département Génomes et Génétique, Paris, France; CNRS, UMR 3525, Paris, France.
Cambray G; Institut Pasteur, Unité de Plasticité du Génome Bactérien, Département Génomes et Génétique, Paris, France.
Mazel D; Institut Pasteur, Unité de Plasticité du Génome Bactérien, Département Génomes et Génétique, Paris, France; CNRS, UMR 3525, Paris, France.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2014 Mar 10; Vol. 9 (3), pp. e91194. Date of Electronic Publication: 2014 Mar 10 (Print Publication: 2014).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Regulation, Bacterial*/drug effects
Promoter Regions, Genetic*
Integrases/*metabolism
Integrons/*genetics
Vibrio cholerae/*genetics
Bacterial Proteins/metabolism ; Base Sequence ; Catabolite Repression/drug effects ; Catabolite Repression/genetics ; Culture Media ; Cyclic AMP/metabolism ; Genes, Bacterial ; Molecular Sequence Data ; SOS Response, Genetics/drug effects ; SOS Response, Genetics/genetics ; Sigma Factor/metabolism ; Sodium Chloride/pharmacology ; Temperature ; Transcription Initiation Site ; Vibrio cholerae/drug effects ; Vibrio cholerae/growth & development

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Skocz do pozycji: 11.

Tytuł:: Characterization of the SigD regulon of C. difficile and its positive control of toxin production through the regulation of tcdR.
Autorzy:: El Meouche I; Laboratoire G.R.A.M. (EA 2656 IFR 23 IHURBM), Université de Rouen, Rouen, France.
Peltier J; Laboratoire G.R.A.M. (EA 2656 IFR 23 IHURBM), Université de Rouen, Rouen, France.
Monot M; Laboratoire Pathogenèse des Bactéries Anaérobies, Institut Pasteur, Paris, France.
Soutourina O; Laboratoire Pathogenèse des Bactéries Anaérobies, Institut Pasteur, Paris, France ; Université Paris Diderot, Sorbonne Paris Cité, Cellule Pasteur, Paris, France.
Pestel-Caron M; Laboratoire G.R.A.M. (EA 2656 IFR 23 IHURBM), Université de Rouen, Rouen, France.
Dupuy B; Laboratoire Pathogenèse des Bactéries Anaérobies, Institut Pasteur, Paris, France.
Pons JL; Laboratoire G.R.A.M. (EA 2656 IFR 23 IHURBM), Université de Rouen, Rouen, France ; Laboratoire Ecosystème intestinal, Probiotiques, Antibiotiques (EA 4065, IFR IMTCE), Université Paris Descartes, Paris, France.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2013 Dec 16; Vol. 8 (12), pp. e83748. Date of Electronic Publication: 2013 Dec 16 (Print Publication: 2013).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Regulation, Bacterial*
Bacterial Proteins/*genetics
Bacterial Proteins/*metabolism
Bacterial Toxins/*biosynthesis
Bacterial Toxins/*genetics
Clostridioides difficile/*genetics
Clostridioides difficile/*metabolism
Base Sequence ; Binding Sites ; Clostridioides difficile/growth & development ; Consensus Sequence ; DNA-Directed RNA Polymerases/metabolism ; Flagella/genetics ; Flagella/metabolism ; Gene Silencing ; Genetic Complementation Test ; Mutation ; Phenotype ; Position-Specific Scoring Matrices ; Promoter Regions, Genetic ; Protein Binding ; Protein Biosynthesis ; Transcription Initiation Site ; Transcription, Genetic ; Transcriptome

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Skocz do pozycji: 12.

Tytuł:: Peroxide responsive regulator PerR of group A Streptococcus is required for the expression of phage-associated DNase Sda1 under oxidative stress.
Autorzy:: Wang CH; Departments of Medical Laboratory Science and Biotechnology, College of Medicine, National Cheng Kung University, Tainan, Taiwan.
Chiang-Ni C
Kuo HT
Zheng PX
Tsou CC
Wang S
Tsai PJ
Chuang WJ
Lin YS
Liu CC
Wu JJ; Pokaż więcej
Źródło:: PloS one [PLoS One] 2013 Dec 03; Vol. 8 (12), pp. e81882. Date of Electronic Publication: 2013 Dec 03 (Print Publication: 2013).
Typ publikacji:: Journal Article
MeSH Terms:: Gene Expression Regulation, Bacterial*
Oxidative Stress*
Bacterial Proteins/*metabolism
Bacteriophages/*physiology
Deoxyribonuclease I/*genetics
Repressor Proteins/*metabolism
Streptococcus pyogenes/*metabolism
Streptococcus pyogenes/*virology
Amino Acid Sequence ; Bacterial Proteins/chemistry ; Bacterial Proteins/genetics ; Binding Sites ; Metals/metabolism ; Molecular Sequence Data ; Mutation ; Promoter Regions, Genetic/genetics ; Repressor Proteins/chemistry ; Repressor Proteins/genetics ; Streptococcus pyogenes/genetics ; Transcription Initiation Site

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Skocz do pozycji: 13.

Tytuł:: Expression of mucoid induction factor MucE is dependent upon the alternate sigma factor AlgU in Pseudomonas aeruginosa.
Autorzy:: Yin Y
Damron FH
Withers TR
Pritchett CL
Wang X
Schurr MJ
Yu HD; Department of Biochemistry and Microbiology, Joan C, Edwards School of Medicine at Marshall University, Huntington, WV 25755, USA. .; Pokaż więcej
Źródło:: BMC microbiology [BMC Microbiol] 2013 Oct 18; Vol. 13, pp. 232. Date of Electronic Publication: 2013 Oct 18.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Gene Expression Regulation, Bacterial*
Transcription, Genetic*
Bacterial Proteins/*metabolism
Peptide Hydrolases/*biosynthesis
Pseudomonas aeruginosa/*genetics
Sigma Factor/*metabolism
Alginates ; Glucuronic Acid/biosynthesis ; Hexuronic Acids ; Promoter Regions, Genetic ; Transcription Initiation Site