Understanding of bacterial lignin extracellular degradation mechanisms by Pseudomonas putida KT2440 via secretomic analysis.
Autorzy:
Xu Z; Bioproducts, Sciences & Engineering Laboratory, Department of Biological Systems Engineering, ashington State University Tri-Cities, Joint Appointment: Pacific Northwest National Laboratory, 2710 Crimson Way, Richland, WA, 99354, USA. Peng B; Bioproducts, Sciences & Engineering Laboratory, Department of Biological Systems Engineering, ashington State University Tri-Cities, Joint Appointment: Pacific Northwest National Laboratory, 2710 Crimson Way, Richland, WA, 99354, USA. Kitata RB; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, 99352, USA. Nicora CD; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, 99352, USA. WeitzKK; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, 99352, USA. Pu Y; Joint Institute for Biological Sciences, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA. Shi T; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, 99352, USA. Cort JR; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, 99352, USA. Ragauskas AJ; Joint Institute for Biological Sciences, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.; Department of Chemical and Biomolecular Engineering, University of Tennessee, Knoxville, TN, 37996, USA.; Department of Forestry, Wildlife, and Fisheries, Center for Renewable Carbon, University of Tennessee Institute of Agriculture, Knoxville, TN, 37996, USA. Yang B; Bioproducts, Sciences & Engineering Laboratory, Department of Biological Systems Engineering, ashington State University Tri-Cities, Joint Appointment: Pacific Northwest National Laboratory, 2710 Crimson Way, Richland, WA, 99354, USA. .; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, 99352, USA. .
Proteomic and phosphoproteomic measurements enhance ability to predict ex vivo drug response in AML.
Autorzy:
Gosline SJC; Pacific Northwest National Laboratory, Seattle, WA, USA. Tognon C; Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA.; Division of Hematology & Medical Oncology, Department of Medicine, Oregon Health & Science University, Portland, OR, USA. Nestor M; Pacific Northwest National Laboratory, Seattle, WA, USA. Joshi S; Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA.; Division of Hematology & Medical Oncology, Department of Medicine, Oregon Health & Science University, Portland, OR, USA. Modak R; Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA. Damnernsawad A; Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA.; Division of Hematology & Medical Oncology, Department of Medicine, Oregon Health & Science University, Portland, OR, USA.; Department of Biology, Faculty of Science, Mahidol University, Bangkok, Thailand. Posso C; Pacific Northwest National Laboratory, Seattle, WA, USA. Moon J; Pacific Northwest National Laboratory, Seattle, WA, USA. Hansen JR; Pacific Northwest National Laboratory, Seattle, WA, USA. Hutchinson-Bunch C; Pacific Northwest National Laboratory, Seattle, WA, USA. Pino JC; Pacific Northwest National Laboratory, Seattle, WA, USA. Gritsenko MA; Pacific Northwest National Laboratory, Seattle, WA, USA. WeitzKK; Pacific Northwest National Laboratory, Seattle, WA, USA. Traer E; Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA.; Division of Hematology & Medical Oncology, Department of Medicine, Oregon Health & Science University, Portland, OR, USA. Tyner J; Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA.; Division of Hematology & Medical Oncology, Department of Medicine, Oregon Health & Science University, Portland, OR, USA. Druker B; Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA.; Division of Hematology & Medical Oncology, Department of Medicine, Oregon Health & Science University, Portland, OR, USA. Agarwal A; Knight Cancer Institute, Oregon Health & Science University, Portland, OR, USA.; Division of Hematology & Medical Oncology, Department of Medicine, Oregon Health & Science University, Portland, OR, USA.; Division of Oncological Sciences, Oregon Health & Science University, Portland, OR, USA.; Department of Cell, Developmental, and Cancer Biology, Oregon Health & Science University, Portland, OR, USA. Piehowski P; Pacific Northwest National Laboratory, Seattle, WA, USA. McDermott JE; Pacific Northwest National Laboratory, Seattle, WA, USA.; Department of Molecular Microbiology and Immunology, Oregon Health & Science University, Portland, OR, USA. Rodland K; Pacific Northwest National Laboratory, Seattle, WA, USA. .; Department of Cell, Developmental, and Cancer Biology, Oregon Health & Science University, Portland, OR, USA. .
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Źródło:
Clinical proteomics [Clin Proteomics] 2022 Jul 27; Vol. 19 (1), pp. 30. Date of Electronic Publication: 2022 Jul 27.
Residual tissue repositories as a resource for population-based cancer proteomic studies.
Autorzy:
Piehowski PD; 1Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354 USA. Petyuk VA; 1Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354 USA. Sontag RL; 1Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354 USA. Gritsenko MA; 1Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354 USA. WeitzKK; 1Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354 USA. Fillmore TL; 1Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354 USA. Moon J; 1Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354 USA. Makhlouf H; 2Division of Cancer Treatment and Diagnosis, National Cancer Institute, Rockville, MD 20850 USA. Chuaqui RF; 2Division of Cancer Treatment and Diagnosis, National Cancer Institute, Rockville, MD 20850 USA. Boja ES; 3Office of Cancer Clinical Proteomics Research, National Cancer Institute, Bethesda, MD 20892 USA. Rodriguez H; 3Office of Cancer Clinical Proteomics Research, National Cancer Institute, Bethesda, MD 20892 USA. Lee JSH; 4Center for Strategic Scientific Initiatives, National Cancer Institute, Bethesda, MD 20892 USA. Smith RD; 1Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354 USA. Carrick DM; 5Division of Cancer Control and Population Sciences, National Cancer Institute, Rockville, MD 20850 USA. Liu T; 1Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354 USA. Rodland KD; 1Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354 USA.
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Źródło:
Clinical proteomics [Clin Proteomics] 2018 Aug 03; Vol. 15, pp. 26. Date of Electronic Publication: 2018 Aug 03 (Print Publication: 2018).
Lipidomics reveals dramatic lipid compositional changes in the maturing postnatal lung.
Autorzy:
Dautel SE; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA. Kyle JE; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA. Clair G; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA. Sontag RL; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA. WeitzKK; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA. Shukla AK; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA. Nguyen SN; Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA. Kim YM; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA. Zink EM; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA. Luders T; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA. Frevert CW; Center for Lung Biology, University of Washington, Seattle, Washington, USA. Gharib SA; Center for Lung Biology, University of Washington, Seattle, Washington, USA. Laskin J; Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA. Carson JP; Texas Advanced Computing Center, University of Texas at Austin, Austin, TX 78758, USA. Metz TO; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA. Corley RA; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA. Ansong C; Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA.
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Źródło:
Scientific reports [Sci Rep] 2017 Feb 01; Vol. 7, pp. 40555. Date of Electronic Publication: 2017 Feb 01.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
Metabolic reprogramming during purine stress in the protozoan pathogen Leishmania donovani.
Autorzy:
Martin JL; Department of Biochemistry & Molecular Biology, Oregon Health & Science University, Portland, Oregon, United States of America. Yates PA; Department of Biochemistry & Molecular Biology, Oregon Health & Science University, Portland, Oregon, United States of America. Soysa R; Department of Biochemistry & Molecular Biology, Oregon Health & Science University, Portland, Oregon, United States of America. Alfaro JF; Division of Biological Sciences, Pacific Northwest National Laboratory, Richland, Washington, United States of America. Yang F; Division of Biological Sciences, Pacific Northwest National Laboratory, Richland, Washington, United States of America. Burnum-Johnson KE; Division of Biological Sciences, Pacific Northwest National Laboratory, Richland, Washington, United States of America. Petyuk VA; Division of Biological Sciences, Pacific Northwest National Laboratory, Richland, Washington, United States of America. WeitzKK; Division of Biological Sciences, Pacific Northwest National Laboratory, Richland, Washington, United States of America. Camp DG 2nd; Division of Biological Sciences, Pacific Northwest National Laboratory, Richland, Washington, United States of America. Smith RD; Division of Biological Sciences, Pacific Northwest National Laboratory, Richland, Washington, United States of America. Wilmarth PA; Department of Biochemistry & Molecular Biology, Oregon Health & Science University, Portland, Oregon, United States of America ; Proteomics Shared Resource Core, Oregon Health & Science University, Portland, Oregon, United States of America. David LL; Department of Biochemistry & Molecular Biology, Oregon Health & Science University, Portland, Oregon, United States of America ; Proteomics Shared Resource Core, Oregon Health & Science University, Portland, Oregon, United States of America. Ramasamy G; Seattle Biomedical Research Institute, Seattle, Washington, United States of America. Myler PJ; Seattle Biomedical Research Institute, Seattle, Washington, United States of America ; Department of Global Health and Department of Biomedical Informatics & Medical Education, University of Washington, Seattle, Washington, United States of America. Carter NS; Department of Biochemistry & Molecular Biology, Oregon Health & Science University, Portland, Oregon, United States of America.
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Źródło:
PLoS pathogens [PLoS Pathog] 2014 Feb 27; Vol. 10 (2), pp. e1003938. Date of Electronic Publication: 2014 Feb 27 (Print Publication: 2014).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
A method to determine lysine acetylation stoichiometries.
Autorzy:
Nakayasu ES; Biological Science Division and Environmental, Pacific Northwest National Laboratory, Richland, WA 99352, USA ; Bindley Bioscience Center, Discovery Park, Purdue University, West Lafayette, IN 47907, USA. Wu S; Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA 99352, USA. Sydor MA; Biological Science Division and Environmental, Pacific Northwest National Laboratory, Richland, WA 99352, USA. Shukla AK; Biological Science Division and Environmental, Pacific Northwest National Laboratory, Richland, WA 99352, USA. WeitzKK; Biological Science Division and Environmental, Pacific Northwest National Laboratory, Richland, WA 99352, USA. Moore RJ; Biological Science Division and Environmental, Pacific Northwest National Laboratory, Richland, WA 99352, USA. Hixson KK; Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA 99352, USA. Kim JS; Biological Science Division and Environmental, Pacific Northwest National Laboratory, Richland, WA 99352, USA ; Institute for Basic Science, Seoul National University, Seoul 151-747, Republic of Korea. Petyuk VA; Biological Science Division and Environmental, Pacific Northwest National Laboratory, Richland, WA 99352, USA. Monroe ME; Biological Science Division and Environmental, Pacific Northwest National Laboratory, Richland, WA 99352, USA. Pasa-Tolic L; Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA 99352, USA. Qian WJ; Biological Science Division and Environmental, Pacific Northwest National Laboratory, Richland, WA 99352, USA. Smith RD; Biological Science Division and Environmental, Pacific Northwest National Laboratory, Richland, WA 99352, USA. Adkins JN; Biological Science Division and Environmental, Pacific Northwest National Laboratory, Richland, WA 99352, USA. Ansong C; Biological Science Division and Environmental, Pacific Northwest National Laboratory, Richland, WA 99352, USA.
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