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Tytuł :
A Genome Epidemiological Study of SARS-CoV-2 Introduction into Japan.
Autorzy :
Sekizuka T; Pathogen Genomics Center, National Institute of Infectious Diseases, Tokyo, Japan.
Itokawa K; Pathogen Genomics Center, National Institute of Infectious Diseases, Tokyo, Japan.
Hashino M; Pathogen Genomics Center, National Institute of Infectious Diseases, Tokyo, Japan.
Kawano-Sugaya T; Pathogen Genomics Center, National Institute of Infectious Diseases, Tokyo, Japan.
Tanaka R; Pathogen Genomics Center, National Institute of Infectious Diseases, Tokyo, Japan.
Yatsu K; Pathogen Genomics Center, National Institute of Infectious Diseases, Tokyo, Japan.
Ohnishi A; Sapporo City Institute of Public Health, Sapporo, Japan.
Goto K; Ibaraki Prefectural Institute of Public Health, Ibaraki, Japan.
Tsukagoshi H; Gunma Prefectural Institute of Public Health and Environmental Sciences, Gunma, Japan.
Ehara H; Saitama Prefectural Institute of Public Health, Saitama, Japan.
Sadamasu K; Department of Microbiology, Tokyo Metropolitan Institute of Public Health, Tokyo, Japan.
Taira M; Division of Virology and Medical Zoology, Chiba Prefectural Institute of Public Health, Chiba, Japan.
Shibata S; Microbiology Department, Nagoya City Public Health Research Institute, Aichi, Japan.
Nomoto R; Department of Infectious Diseases, Kobe Institute of Health, Kobe, Hyogo, Japan.
Hiroi S; Division of Microbiology, Osaka Institute of Public Health, Osaka, Japan.
Toho M; Fukui Prefectural Institute of Public Health and Environmental Science, Fukui, Japan.
Shimada T; Infectious Disease Surveillance Center, National Institute of Infectious Diseases, Tokyo, Japan.
Matsui T; Infectious Disease Surveillance Center, National Institute of Infectious Diseases, Tokyo, Japan.
Sunagawa T; Infectious Disease Surveillance Center, National Institute of Infectious Diseases, Tokyo, Japan.
Kamiya H; Infectious Disease Surveillance Center, National Institute of Infectious Diseases, Tokyo, Japan.
Yahata Y; Infectious Disease Surveillance Center, National Institute of Infectious Diseases, Tokyo, Japan.
Yamagishi T; Infectious Disease Surveillance Center, National Institute of Infectious Diseases, Tokyo, Japan.
Suzuki M; Infectious Disease Surveillance Center, National Institute of Infectious Diseases, Tokyo, Japan.
Wakita T; National Institute of Infectious Diseases, Tokyo, Japan.
Kuroda M; Pathogen Genomics Center, National Institute of Infectious Diseases, Tokyo, Japan .
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Źródło :
MSphere [mSphere] 2020 Nov 11; Vol. 5 (6). Date of Electronic Publication: 2020 Nov 11.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Whole Genome Sequencing*
Betacoronavirus/*genetics
Coronavirus Infections/*epidemiology
Pneumonia, Viral/*epidemiology
RNA, Viral/*analysis
Betacoronavirus/isolation & purification ; Clinical Laboratory Techniques ; Coronavirus Infections/diagnosis ; Coronavirus Infections/transmission ; Coronavirus Infections/virology ; Emigration and Immigration ; Haplotypes ; Health Policy ; Humans ; Japan/epidemiology ; Pandemics ; Pneumonia, Viral/diagnosis ; Pneumonia, Viral/transmission ; Pneumonia, Viral/virology
SCR Disease Name :
COVID-19
Czasopismo naukowe
Tytuł :
SARS-CoV-2 Whole Genome Amplification and Sequencing for Effective Population-Based Surveillance and Control of Viral Transmission.
Autorzy :
Harilal D; Al Jalila Genomics Center, Al Jalila Children's Hospital, Dubai, United Arab Emirates.
Ramaswamy S; Al Jalila Genomics Center, Al Jalila Children's Hospital, Dubai, United Arab Emirates.
Loney T; College of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates.
Suwaidi HA; College of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates.
Khansaheb H; Medical Education & Research Department, Dubai Health Authority, Dubai, United Arab Emirates.
Alkhaja A; Medical Education & Research Department, Dubai Health Authority, Dubai, United Arab Emirates.
Varghese R; Microbiology and Infection Control Unit, Pathology and Genetics Department, Latifa Women and Children Hospital, Dubai Health Authority, Dubai, United Arab Emirates.
Deesi Z; Microbiology and Infection Control Unit, Pathology and Genetics Department, Latifa Women and Children Hospital, Dubai Health Authority, Dubai, United Arab Emirates.
Nowotny N; College of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates.; Institute of Virology, University of Veterinary Medicine Vienna, Vienna, Austria.
Alsheikh-Ali A; College of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates.
Abou Tayoun A; Al Jalila Genomics Center, Al Jalila Children's Hospital, Dubai, United Arab Emirates.; College of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates.
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Źródło :
Clinical chemistry [Clin Chem] 2020 Nov 01; Vol. 66 (11), pp. 1450-1458.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Betacoronavirus/*genetics
Coronavirus Infections/*transmission
Pneumonia, Viral/*transmission
Whole Genome Sequencing/*methods
Costs and Cost Analysis ; Genome, Viral ; Humans ; Information Storage and Retrieval ; Pandemics ; Phylogeny ; Population Surveillance ; Whole Genome Sequencing/economics
SCR Disease Name :
COVID-19
Czasopismo naukowe
Tytuł :
Whole-genome resequencing provides insights into the evolution and divergence of the native domestic yaks of the Qinghai-Tibet Plateau.
Autorzy :
Chai ZX; Key Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization, Sichuan Province and Ministry of Education, Southwest Minzu University, Chengdu, China.
Xin JW; State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Institute of Animal Science and Veterinary Research, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, China.
Zhang CF; State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Institute of Animal Science and Veterinary Research, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, China.
Dawayangla; State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Institute of Animal Science and Veterinary Research, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, China.
Luosang; State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Institute of Animal Science and Veterinary Research, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, China.
Zhang Q; State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Institute of Animal Science and Veterinary Research, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, China.
Pingcuozhandui; State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Institute of Animal Science and Veterinary Research, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, China.
Li C; State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Institute of Animal Science and Veterinary Research, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, China.
Zhu Y; State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Institute of Animal Science and Veterinary Research, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, China.
Cao HW; State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Institute of Animal Science and Veterinary Research, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, China.
Wang H; Key Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization, Sichuan Province and Ministry of Education, Southwest Minzu University, Chengdu, China.
Han JL; CAAS-ILRI Joint Laboratory on Livestock and Forage Genetic Resources, Institute of Animal Science, Chinese Academy of Agriculture Sciences (CAAS), Beijing, China.
Ji QM; State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Institute of Animal Science and Veterinary Research, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, China. .
Zhong JC; Key Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization, Sichuan Province and Ministry of Education, Southwest Minzu University, Chengdu, China. .
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Źródło :
BMC evolutionary biology [BMC Evol Biol] 2020 Oct 27; Vol. 20 (1), pp. 137. Date of Electronic Publication: 2020 Oct 27.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Evolution, Molecular*
Genetic Variation*
Phylogeny*
Whole Genome Sequencing*
Cattle/*genetics
Animals ; China ; Domestication ; Genome ; Genomics ; Tibet
Czasopismo naukowe
Tytuł :
Whole genome sequence analysis of pulmonary function and COPD in 19,996 multi-ethnic participants.
Autorzy :
Zhao X; Center for Statistical Genetics, and Department of Biostatistics, University of Michigan, Ann Arbor, MI, 48109, USA.
Qiao D; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, 02115, USA.
Yang C; Center for Public Health Genomics, University of Virginia, Charlottesville, VA, 22908, USA.
Kasela S; New York Genome Center, New York, NY, 10013, USA.; Department of Systems Biology, Columbia University, New York, NY, 10032, USA.
Kim W; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, 02115, USA.
Ma Y; Center for Public Health Genomics, University of Virginia, Charlottesville, VA, 22908, USA.
Shrine N; Genetic Epidemiology Group, Department of Health Sciences, University of Leicester, Leicester, LE1 7RH, United Kingdom.
Batini C; Genetic Epidemiology Group, Department of Health Sciences, University of Leicester, Leicester, LE1 7RH, United Kingdom.
Sofer T; Department of Medicine, Harvard Medical School, Boston, MA, 02115, USA.; Division of Sleep and Circadian Disorders, Brigham and Women's Hospital, Boston, MA, 02115, USA.
Taliun SAG; Center for Statistical Genetics, and Department of Biostatistics, University of Michigan, Ann Arbor, MI, 48109, USA.
Sakornsakolpat P; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, 02115, USA.
Balte PP; Department of Medicine, Columbia University Medical Center, New York, NY, 10032, USA.
Prokopenko D; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, 02115, USA.
Yu B; Department of Epidemiology, Human Genetics & Environmental Sciences, UTHealth School of Public Health, Houston, TX, 77030, USA.
Lange LA; Division of Biomedical Informatics and Personalized Medicine, Department of Medicine, University of Colorado School of Medicine Anschutz Medical Campus, Aurora, CO, 80045, USA.
Dupuis J; Department of Biostatistics, Boston University School of Public Health, Boston, MA, 02118, USA.
Cade BE; Department of Medicine, Harvard Medical School, Boston, MA, 02115, USA.; Division of Sleep and Circadian Disorders, Brigham and Women's Hospital, Boston, MA, 02115, USA.
Lee J; Division of Sleep and Circadian Disorders, Brigham and Women's Hospital, Boston, MA, 02115, USA.
Gharib SA; Division of Pulmonary, Critical Care and Sleep Medicine, University of Washington, Seattle, WA, 98109, USA.
Daya M; Division of Biomedical Informatics and Personalized Medicine, Department of Medicine, University of Colorado School of Medicine Anschutz Medical Campus, Aurora, CO, 80045, USA.
Laurie CA; Department of Biostatistics, University of Washington, Seattle, WA, 98195, USA.
Ruczinski I; Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, 21205, USA.
Cupples LA; Department of Biostatistics, Boston University School of Public Health, Boston, MA, 02118, USA.; Boston University and the National Heart Lung and Blood Institute's Framingham Heart Study, Framingham, MA, 01702, USA.
Loehr LR; Department of Medicine, UNC School of Medicine, Chapel Hill, NC, 27599, USA.
Bartz TM; Department of Biostatistics, University of Washington, Seattle, WA, 98195, USA.
Morrison AC; Human Genetics Center, Department of Epidemiology, Human Genetics, and Environmental Sciences, School of Public Health, The University of Texas Health Science Center at Houston, Houston, TX, 77030, USA.
Psaty BM; Cardiovascular Health Research Unit, Departments of Medicine, Epidemiology, and Health Services, University of Washington, Seattle, WA, 98101, USA.; Kaiser Permanente Washington Health Research Institute, Seattle, WA, 98101, USA.
Vasan RS; Boston University and the National Heart Lung and Blood Institute's Framingham Heart Study, Framingham, MA, 01702, USA.; Department of Preventive Medicine and Epidemiology, Boston University School of Medicine and Public Health, Boston, MA, 02118, USA.
Wilson JG; Department of Physiology and Biophysics, University of Mississippi Medical Center, Jackson, MS, 39216, USA.
Taylor KD; The Institute for Translational Genomics and Population Sciences, The Department of Pediatrics, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA, 90502, USA.
Durda P; Department of Pathology and Laboratory Medicine, Robert Larner, M.D. College of Medicine, University of Vermont, Burlington, VT, 05405, USA.
Johnson WC; Department of Biostatistics, University of Washington, Seattle, WA, 98195, USA.
Cornell E; Department of Pathology and Laboratory Medicine, Robert Larner, M.D. College of Medicine, University of Vermont, Burlington, VT, 05405, USA.
Guo X; The Institute for Translational Genomics and Population Sciences, The Department of Pediatrics, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA, 90502, USA.
Liu Y; Department of Medicine, Division of Cardiology, Duke Molecular Physiology Institute, Duke University Medical Center, Durham, NC, 27701, USA.
Tracy RP; Department of Pathology and Laboratory Medicine, Robert Larner, M.D. College of Medicine, University of Vermont, Burlington, VT, 05405, USA.
Ardlie KG; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.
Aguet F; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.
VanDenBerg DJ; Department of Preventive Medicine, University of Southern California, Los Angeles, CA, 90033, USA.
Papanicolaou GJ; Division of Cardiovascular Sciences, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, MD, 20892, USA.
Rotter JI; The Institute for Translational Genomics and Population Sciences, The Department of Pediatrics, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA, 90502, USA.
Barnes KC; Division of Biomedical Informatics and Personalized Medicine, Department of Medicine, University of Colorado School of Medicine Anschutz Medical Campus, Aurora, CO, 80045, USA.
Jain D; Department of Biostatistics, University of Washington, Seattle, WA, 98195, USA.
Nickerson DA; Department of Genome Sciences, University of Washington, Seattle, WA, 98195, USA.
Muzny DM; The Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Metcalf GA; The Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Doddapaneni H; The Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Dugan-Perez S; The Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Gupta N; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.
Gabriel S; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.
Rich SS; Center for Public Health Genomics, University of Virginia, Charlottesville, VA, 22908, USA.
O'Connor GT; Boston University School Of Medicine, Pulmonary Center, Boston, MA, 02118, USA.
Redline S; Department of Medicine, Harvard Medical School, Boston, MA, 02115, USA.; Division of Sleep and Circadian Disorders, Brigham and Women's Hospital, Boston, MA, 02115, USA.; Division of Pulmonary, Critical Care, and Sleep Medicine, Beth Israel Deaconess Medical Center, Boston, MA, 02215, USA.
Reed RM; Division of Pulmonary and Critical Care Medicine, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.
Laurie CC; Department of Biostatistics, University of Washington, Seattle, WA, 98195, USA.
Daviglus ML; Institute for Minority Health Research, University of Illinois at Chicago, Chicago, IL, 60612, USA.
Preudhomme LK; Department of Psychology, University of Miami, Miami, FL, 33124, USA.
Burkart KM; Department of Medicine, Columbia University Medical Center, New York, NY, 10032, USA.
Kaplan RC; Department of Epidemiology and Population Health, Albert Einstein College of Medicine, Bronx, New York, NY, 10461, USA.; Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, 98109, USA.
Wain LV; Genetic Epidemiology Group, Department of Health Sciences, University of Leicester, Leicester, LE1 7RH, United Kingdom.; National Institute for Health Research, Leicester Respiratory Biomedical Research Centre, Glenfield Hospital, Leicester, LE3 9QP, UK.
Tobin MD; Genetic Epidemiology Group, Department of Health Sciences, University of Leicester, Leicester, LE1 7RH, United Kingdom.; National Institute for Health Research, Leicester Respiratory Biomedical Research Centre, Glenfield Hospital, Leicester, LE3 9QP, UK.
London SJ; Epidemiology Branch, National Institute of Environmental Health Sciences, National Institutes of Health, Department of Health and Human Services, Durham, NC, 27709, USA.
Lappalainen T; New York Genome Center, New York, NY, 10013, USA.; Department of Systems Biology, Columbia University, New York, NY, 10032, USA.
Oelsner EC; Department of Medicine, Columbia University Medical Center, New York, NY, 10032, USA.
Abecasis GR; Center for Statistical Genetics, and Department of Biostatistics, University of Michigan, Ann Arbor, MI, 48109, USA.
Silverman EK; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, 02115, USA.
Barr RG; Department of Medicine, Columbia University Medical Center, New York, NY, 10032, USA.
Cho MH; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, 02115, USA. .
Manichaikul A; Center for Public Health Genomics, University of Virginia, Charlottesville, VA, 22908, USA. .
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Corporate Authors :
NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium
TOPMed Lung Working Group
Źródło :
Nature communications [Nat Commun] 2020 Oct 14; Vol. 11 (1), pp. 5182. Date of Electronic Publication: 2020 Oct 14.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms :
Genetic Loci*
Whole Genome Sequencing*
African Americans/*genetics
Pulmonary Disease, Chronic Obstructive/*genetics
Respiratory Physiological Phenomena/*genetics
Adult ; Aged ; Aged, 80 and over ; Alpha-Ketoglutarate-Dependent Dioxygenase FTO/genetics ; Calcium-Binding Proteins/genetics ; Feasibility Studies ; Female ; Follow-Up Studies ; Genetic Predisposition to Disease ; Genome-Wide Association Study ; Humans ; Intracellular Signaling Peptides and Proteins/genetics ; Lung/physiopathology ; Male ; Middle Aged ; Polymorphism, Single Nucleotide ; Protein Inhibitors of Activated STAT/genetics ; Pulmonary Disease, Chronic Obstructive/ethnology ; Pulmonary Disease, Chronic Obstructive/physiopathology ; Small Ubiquitin-Related Modifier Proteins/genetics
Czasopismo naukowe
Tytuł :
MethHaplo: combining allele-specific DNA methylation and SNPs for haplotype region identification.
Autorzy :
Zhou Q; National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China.; Agricultural Bioinformatics Key Laboratory of Hubei Province, Hubei Engineering Technology Research Center of Agricultural Big Data, 3D Genomics Research Center, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China.
Wang Z; College of Life Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Li J; College of Life Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Sung WK; Agricultural Bioinformatics Key Laboratory of Hubei Province, Hubei Engineering Technology Research Center of Agricultural Big Data, 3D Genomics Research Center, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China.; Department of Computer Science, National University of Singapore, Singapore, 117417, Singapore.; Department of Computational and Systems Biology, Genome Institute of Singapore, Singapore, 138672, Singapore.
Li G; National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China. .; Agricultural Bioinformatics Key Laboratory of Hubei Province, Hubei Engineering Technology Research Center of Agricultural Big Data, 3D Genomics Research Center, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China. .
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Źródło :
BMC bioinformatics [BMC Bioinformatics] 2020 Oct 12; Vol. 21 (1), pp. 451. Date of Electronic Publication: 2020 Oct 12.
Typ publikacji :
Journal Article
MeSH Terms :
Alleles*
DNA Methylation*
Polymorphism, Single Nucleotide*
Whole Genome Sequencing*
Haplotypes/*genetics
Epigenesis, Genetic ; Software
Czasopismo naukowe
Tytuł :
Single-nucleotide polymorphisms in a vancomycin-resistant Staphylococcus aureus strain based on whole-genome sequencing.
Autorzy :
Kim JW; Division of Antimicrobial Resistance, Center for Infectious Diseases Research, National Institute of Health, Korea Centers for Disease Control and Prevention, Osong Health Technology Administration Complex, 187, Osongsaengmyeong 2-ro, Osong-eup, Heungdeok-gu, Cheongju-si, Republic of Korea.
Lee KJ; Division of Antimicrobial Resistance, Center for Infectious Diseases Research, National Institute of Health, Korea Centers for Disease Control and Prevention, Osong Health Technology Administration Complex, 187, Osongsaengmyeong 2-ro, Osong-eup, Heungdeok-gu, Cheongju-si, Republic of Korea. .
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Źródło :
Archives of microbiology [Arch Microbiol] 2020 Oct; Vol. 202 (8), pp. 2255-2261. Date of Electronic Publication: 2020 Jun 13.
Typ publikacji :
Journal Article
MeSH Terms :
Polymorphism, Single Nucleotide*
Whole Genome Sequencing*
Anti-Bacterial Agents/*pharmacology
Staphylococcus aureus/*drug effects
Staphylococcus aureus/*genetics
Vancomycin/*pharmacology
Vancomycin Resistance/*genetics
Cell Wall/genetics ; Humans ; Microbial Sensitivity Tests
Czasopismo naukowe
Tytuł :
The mosaic genome of indigenous African cattle as a unique genetic resource for African pastoralism.
Autorzy :
Kim K; Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.; C&K Genomics, Seoul, Republic of Korea.
Kwon T; Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.
Dessie T; International Livestock Research Institute (ILRI), Addis Ababa, Ethiopia.
Yoo D; Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul, Republic of Korea.
Mwai OA; International Livestock Research Institute (ILRI), Nairobi, Kenya.
Jang J; Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul, Republic of Korea.
Sung S; C&K Genomics, Seoul, Republic of Korea.
Lee S; C&K Genomics, Seoul, Republic of Korea.
Salim B; Department of Parasitology, Faculty of Veterinary Medicine, University of Khartoum, Khartoum North, Sudan.
Jung J; Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.
Jeong H; Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul, Republic of Korea.
Tarekegn GM; Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.; Department of Animal Production and Technology, Bahir Dar University, Bahir Dar, Ethiopia.
Tijjani A; International Livestock Research Institute (ILRI), Addis Ababa, Ethiopia.; The Centre for Tropical Livestock Genetics and Health (CTLGH), The Roslin Institute, The University of Edinburgh, Midlothian, UK.
Lim D; Animal Genomics & Bioinformatics Division, National Institute of Animal Science, RDA, Wanju, Republic of Korea.
Cho S; C&K Genomics, Seoul, Republic of Korea.
Oh SJ; International Agricultural Development and Cooperation Center, Jeonbuk National University, Jeonju, Republic of Korea.
Lee HK; Department of Animal Biotechnology, College of Agriculture and Life Sciences, Jeonbuk National University, Jeonju, Republic of Korea.
Kim J; Department of Animal Science, College of Agriculture and Life Sciences, Gyeongsang National University, Jinju, Republic of Korea.
Jeong C; School of Biological Sciences, Seoul National University, Seoul, Republic of Korea.
Kemp S; International Livestock Research Institute (ILRI), Nairobi, Kenya.; The Centre for Tropical Livestock Genetics and Health (CTLGH), The Roslin Institute, The University of Edinburgh, Midlothian, UK.
Hanotte O; International Livestock Research Institute (ILRI), Addis Ababa, Ethiopia. .; The Centre for Tropical Livestock Genetics and Health (CTLGH), The Roslin Institute, The University of Edinburgh, Midlothian, UK. .; School of Life Sciences, University of Nottingham, Nottingham, UK. .
Kim H; Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea. .; C&K Genomics, Seoul, Republic of Korea. .; Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul, Republic of Korea. .
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Źródło :
Nature genetics [Nat Genet] 2020 Oct; Vol. 52 (10), pp. 1099-1110. Date of Electronic Publication: 2020 Sep 28.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Breeding*
Whole Genome Sequencing*
Adaptation, Physiological/*genetics
Genome/*genetics
Africa ; Alleles ; Animals ; Cattle ; Genotype ; Hot Temperature/adverse effects ; Humans ; Mosaicism ; Polymorphism, Single Nucleotide/genetics ; Reproduction/genetics ; Taurine/genetics
Czasopismo naukowe
Tytuł :
Genopo: a nanopore sequencing analysis toolkit for portable Android devices.
Autorzy :
Samarakoon H; Department of Computer Engineering, University of Peradeniya, Peradeniya, Sri Lanka.
Punchihewa S; Department of Computer Engineering, University of Peradeniya, Peradeniya, Sri Lanka.
Senanayake A; Department of Computer Engineering, University of Peradeniya, Peradeniya, Sri Lanka.
Hammond JM; Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Sydney, NSW, Australia.
Stevanovski I; Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Sydney, NSW, Australia.
Ferguson JM; Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Sydney, NSW, Australia.
Ragel R; Department of Computer Engineering, University of Peradeniya, Peradeniya, Sri Lanka.
Gamaarachchi H; Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Sydney, NSW, Australia. .; School of Computer Science and Engineering, University of New South Wales, Sydney, NSW, Australia. .
Deveson IW; Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Sydney, NSW, Australia. .; St Vincent's Clinical School, University of New South Wales, Sydney, NSW, Australia. .
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Źródło :
Communications biology [Commun Biol] 2020 Sep 29; Vol. 3 (1), pp. 538. Date of Electronic Publication: 2020 Sep 29.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Genome, Human*
Genome, Viral*
Betacoronavirus/*genetics
Computational Biology/*methods
High-Throughput Nucleotide Sequencing/*methods
Whole Genome Sequencing/*methods
Betacoronavirus/pathogenicity ; Cell Phone/instrumentation ; Computational Biology/instrumentation ; Coronavirus Infections/diagnosis ; Coronavirus Infections/virology ; DNA Methylation ; High-Throughput Nucleotide Sequencing/instrumentation ; Humans ; Nanopores ; Pandemics ; Pneumonia, Viral/diagnosis ; Pneumonia, Viral/virology ; Whole Genome Sequencing/instrumentation
SCR Disease Name :
COVID-19
Czasopismo naukowe
Tytuł :
[Detection of genomic copy number variations in patients with unexplained mental retardation/developmental delay by low coverage whole-genome sequencing].
Autorzy :
Song H; Prenatal Diagnosis Center, General Hospital of Wanbei Coal and Power Group, Suzhou, Anhui 234000, China. .
Shi P
Xiao Y
Hou Y
Chen D
Kong X
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Źródło :
Zhonghua yi xue yi chuan xue za zhi = Zhonghua yixue yichuanxue zazhi = Chinese journal of medical genetics [Zhonghua Yi Xue Yi Chuan Xue Za Zhi] 2020 Sep 10; Vol. 37 (9), pp. 953-957.
Typ publikacji :
Journal Article
MeSH Terms :
DNA Copy Number Variations*
Developmental Disabilities*/genetics
Intellectual Disability*/genetics
Whole Genome Sequencing*
Child ; Chromosome Deletion ; Chromosome Duplication ; Genomics ; Humans
Czasopismo naukowe
Tytuł :
Whole genome sequence analysis of the mosquitocidal Bacillus thuringiensis LLP29.
Autorzy :
Ma W; State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops and, School of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian, People's Republic of China.
Chen H; State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops and, School of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian, People's Republic of China.
Jiang X; State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops and, School of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian, People's Republic of China.
Wang J; State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops and, School of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian, People's Republic of China.
Gelbič I; Institute of Entomology, Biological Centre, Czech Academy of Sciences, Branišovská 31, 37005, Ceske Budejovice, Czech Republic. .
Guan X; State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops and, School of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian, People's Republic of China.
Zhang L; State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops and, School of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian, People's Republic of China. .
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Źródło :
Archives of microbiology [Arch Microbiol] 2020 Sep; Vol. 202 (7), pp. 1693-1700. Date of Electronic Publication: 2020 Apr 15.
Typ publikacji :
Journal Article
MeSH Terms :
Whole Genome Sequencing*
Bacillus thuringiensis/*genetics
Genome, Bacterial/*genetics
Bacterial Proteins/genetics ; Molecular Sequence Annotation ; Sequence Analysis ; Virulence Factors/genetics
Czasopismo naukowe
Tytuł :
Whole-genome sequencing of prostate cancer reveals novel mutation-driven processes and molecular subgroups.
Autorzy :
Liang C; Department of Medical Oncology, Beijing Key Laboratory of Clinical Study on Anticancer Molecular Targeted Drugs, National Cancer Center, National Clinical Research Center for Cancer, Cancer Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Niu L; Department of Ultrasound, National Cancer Center, National Clinical Research Center for Cancer, Cancer Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Xiao Z; Department of Urinary Surgery, National Cancer Center, National Clinical Research Center for Cancer, Cancer Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Zheng C; Department of Clinical Laboratory, National Cancer Center, National Clinical Research Center for Cancer, Cancer Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Shen Y; Department of Medical Oncology, Beijing Key Laboratory of Clinical Study on Anticancer Molecular Targeted Drugs, National Cancer Center, National Clinical Research Center for Cancer, Cancer Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Shi Y; Department of Medical Oncology, Beijing Key Laboratory of Clinical Study on Anticancer Molecular Targeted Drugs, National Cancer Center, National Clinical Research Center for Cancer, Cancer Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China. Electronic address: .
Han X; Department of Medical Oncology, Beijing Key Laboratory of Clinical Study on Anticancer Molecular Targeted Drugs, National Cancer Center, National Clinical Research Center for Cancer, Cancer Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China; Department of Clinical Laboratory, National Cancer Center, National Clinical Research Center for Cancer, Cancer Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China. Electronic address: .
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Źródło :
Life sciences [Life Sci] 2020 Aug 01; Vol. 254, pp. 117218. Date of Electronic Publication: 2019 Dec 26.
Typ publikacji :
Journal Article
MeSH Terms :
Mutation*
Whole Genome Sequencing*
Prostatic Neoplasms/*genetics
Humans ; Male
Czasopismo naukowe
Tytuł :
Prediction of treatment outcomes for multidrug-resistant tuberculosis by whole-genome sequencing.
Autorzy :
He G; Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, 200040, China.
Li Y; Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, 200040, China.
Chen X; Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, 200040, China.
Chen J; Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, 200040, China.
Zhang W; Department of Infectious Diseases, Huashan Hospital, Fudan University, Shanghai, 200040, China; State Key Laboratory of Genetic Engineering, School of Life Science, Fudan University, Shanghai, 200438, China; National Clinical Research Center for Aging and Medicine, Huashan Hospital, Fudan University, Shanghai, 200040, China; Key Laboratory of Medical Molecular Virology (MOE/MOH) and Institutes of Biomedical Sciences, Shanghai Medical College, Fudan University, Shanghai, 200032, China. Electronic address: .
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Źródło :
International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases [Int J Infect Dis] 2020 Jul; Vol. 96, pp. 68-72. Date of Electronic Publication: 2020 Apr 24.
Typ publikacji :
Journal Article; Observational Study
MeSH Terms :
Whole Genome Sequencing*/economics
Antitubercular Agents/*therapeutic use
Tuberculosis, Multidrug-Resistant/*drug therapy
Adult ; Antitubercular Agents/pharmacology ; Drug Resistance, Bacterial/genetics ; Female ; Fluoroquinolones/pharmacology ; Genotype ; Humans ; Male ; Middle Aged ; Moxifloxacin/pharmacology ; Mutation ; Mycobacterium tuberculosis/drug effects ; Mycobacterium tuberculosis/genetics ; Prospective Studies ; Treatment Outcome ; Tuberculosis, Multidrug-Resistant/economics ; Tuberculosis, Multidrug-Resistant/microbiology
Czasopismo naukowe
Tytuł :
Use of whole-genome sequencing to predict Mycobacterium tuberculosis drug resistance in Shanghai, China.
Autorzy :
Wu X; Department of Clinical Laboratory, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai, China; Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China. Electronic address: .
Gao R; Department of Clinical Laboratory, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai, China; Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China. Electronic address: .
Shen X; Shanghai Municipal Center for Disease Control and Prevention. Electronic address: .
Guo Y; Department of Clinical Laboratory, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai, China; Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China. Electronic address: .
Yang J; Department of Clinical Laboratory, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai, China; Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China. Electronic address: .
Wu Z; Shanghai Municipal Center for Disease Control and Prevention. Electronic address: .
Tan G; Department of Clinical Laboratory, Shanghai University of Traditional Chinese Medical Attached Shuguang Hospital, Shanghai, China. Electronic address: .
Wang H; Department of Clinical Laboratory, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai, China; Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China. Electronic address: .
Yu F; Department of Clinical Laboratory, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai, China; Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China. Electronic address: .
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Źródło :
International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases [Int J Infect Dis] 2020 Jul; Vol. 96, pp. 48-53. Date of Electronic Publication: 2020 Apr 24.
Typ publikacji :
Evaluation Study; Journal Article
MeSH Terms :
Whole Genome Sequencing*
Antitubercular Agents/*pharmacology
Mycobacterium tuberculosis/*drug effects
Adult ; Amikacin/pharmacology ; China ; Drug Resistance, Bacterial/genetics ; Ethambutol/pharmacology ; Humans ; Isoniazid/pharmacology ; Male ; Mycobacterium tuberculosis/isolation & purification ; Ofloxacin/pharmacology ; Rifampin/pharmacology ; Streptomycin/pharmacology ; Tuberculosis/microbiology
Czasopismo naukowe
Tytuł :
Implementation and use of whole genome sequencing (WGS) in the surveillance of invasive pneumococcal disease, Czech Republic, 2017-2019.
Autorzy :
Kozáková J
Honskus M
Okonji Z
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Transliterated Title :
Implementace a využití metody sekvenace celého genomu (WGS) v surveillance invazivního pneumokokového onemocnění, Česká republika, 2017-2019.
Źródło :
Epidemiologie, mikrobiologie, imunologie : casopis Spolecnosti pro epidemiologii a mikrobiologii Ceske lekarske spolecnosti J.E. Purkyne [Epidemiol Mikrobiol Imunol] 2020 Summer; Vol. 69 (3), pp. 134-141.
Typ publikacji :
Journal Article
MeSH Terms :
Pneumococcal Infections*
Whole Genome Sequencing*
Czech Republic ; Europe ; Humans ; Multilocus Sequence Typing ; Phylogeny
Czasopismo naukowe
Tytuł :
Whole Genome Sequencing of SARS-CoV-2: Adapting Illumina Protocols for Quick and Accurate Outbreak Investigation during a Pandemic.
Autorzy :
Pillay S; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.
Giandhari J; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.
Tegally H; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.
Wilkinson E; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.
Chimukangara B; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.; Centre for AIDS Programme of Research in South Africa (CAPRISA), Durban 4001, South Africa.; Department of Virology, National Health Laboratory Service, University of KwaZulu-Natal, Durban 4001, South Africa.
Lessells R; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.; Infectious Diseases Department, Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban 4001, South Africa.
Moosa Y; Infectious Diseases Department, Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban 4001, South Africa.
Mattison S; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.
Gazy I; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.
Fish M; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.
Singh L; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.
Khanyile KS; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.
San JE; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.
Fonseca V; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.; Laboratorio de Genetica Celular e Molecular, ICB, Universidade Federal de Minas Gerais, Belo Horizonte 31270-901, Brazil.; Laboratório de Flavivírus, Instituto Oswaldo Cruz Fiocruz, Rio de Janeiro 21045-900, Brazil.
Giovanetti M; Laboratório de Flavivírus, Instituto Oswaldo Cruz Fiocruz, Rio de Janeiro 21045-900, Brazil.
Alcantara LC Jr; Laboratorio de Genetica Celular e Molecular, ICB, Universidade Federal de Minas Gerais, Belo Horizonte 31270-901, Brazil.; Laboratório de Flavivírus, Instituto Oswaldo Cruz Fiocruz, Rio de Janeiro 21045-900, Brazil.
de Oliveira T; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.; Centre for AIDS Programme of Research in South Africa (CAPRISA), Durban 4001, South Africa.; Department of Global Health, University of Washington, Seattle, WA 98195, USA.
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Źródło :
Genes [Genes (Basel)] 2020 Aug 17; Vol. 11 (8). Date of Electronic Publication: 2020 Aug 17.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Genome, Viral*
Betacoronavirus/*genetics
Coronavirus Infections/*diagnosis
High-Throughput Nucleotide Sequencing/*methods
Molecular Diagnostic Techniques/*methods
Pneumonia, Viral/*diagnosis
Whole Genome Sequencing/*methods
Betacoronavirus/pathogenicity ; Coronavirus Infections/virology ; High-Throughput Nucleotide Sequencing/standards ; Humans ; Molecular Diagnostic Techniques/standards ; Pandemics ; Pneumonia, Viral/virology ; Reproducibility of Results ; Sensitivity and Specificity ; Whole Genome Sequencing/standards
SCR Disease Name :
COVID-19
Czasopismo naukowe
Tytuł :
Evaluation of the Ion AmpliSeq SARS-CoV-2 Research Panel by Massive Parallel Sequencing.
Autorzy :
Alessandrini F; Legal Medicine Unit, Department of Biomedical Sciences and Public Health, Polytechnic University of Marche, Torrette, 60126 Ancona, Italy.
Caucci S; Virology Unit, Department of Biomedical Sciences and Public Health, Polytechnic University of Marche, Ancona, Torrette, 60126 Ancona, Italy.
Onofri V; Legal Medicine Unit, AOU Ospedali Riuniti, Torrette, 60126 Ancona, Italy.
Melchionda F; Legal Medicine Unit, Department of Biomedical Sciences and Public Health, Polytechnic University of Marche, Torrette, 60126 Ancona, Italy.
Tagliabracci A; Legal Medicine Unit, Department of Biomedical Sciences and Public Health, Polytechnic University of Marche, Torrette, 60126 Ancona, Italy.
Bagnarelli P; Virology Unit, Department of Biomedical Sciences and Public Health, Polytechnic University of Marche, Ancona, Torrette, 60126 Ancona, Italy.
Di Sante L; Virology Unit, Department of Biomedical Sciences and Public Health, Polytechnic University of Marche, Ancona, Torrette, 60126 Ancona, Italy.
Turchi C; Legal Medicine Unit, Department of Biomedical Sciences and Public Health, Polytechnic University of Marche, Torrette, 60126 Ancona, Italy.
Menzo S; Virology Unit, Department of Biomedical Sciences and Public Health, Polytechnic University of Marche, Ancona, Torrette, 60126 Ancona, Italy.
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Źródło :
Genes [Genes (Basel)] 2020 Aug 12; Vol. 11 (8). Date of Electronic Publication: 2020 Aug 12.
Typ publikacji :
Evaluation Study; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Betacoronavirus/*genetics
Coronavirus Infections/*virology
Pneumonia, Viral/*virology
Polymerase Chain Reaction/*methods
Whole Genome Sequencing/*methods
Adult ; Aged ; Aged, 80 and over ; Animals ; Betacoronavirus/pathogenicity ; Chlorocebus aethiops ; DNA Primers/standards ; Female ; Genome, Viral ; Humans ; Male ; Middle Aged ; Pandemics ; Polymerase Chain Reaction/standards ; Vero Cells ; Whole Genome Sequencing/standards
SCR Disease Name :
COVID-19
Czasopismo naukowe
Tytuł :
Mapping and characterization of structural variation in 17,795 human genomes.
Autorzy :
Abel HJ; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO, USA.; Department of Genetics, Washington University School of Medicine, St Louis, MO, USA.
Larson DE; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO, USA.; Department of Genetics, Washington University School of Medicine, St Louis, MO, USA.
Regier AA; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO, USA.; Department of Medicine, Washington University School of Medicine, St Louis, MO, USA.
Chiang C; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO, USA.
Das I; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO, USA.
Kanchi KL; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO, USA.
Layer RM; BioFrontiers Institute, University of Colorado, Boulder, CO, USA.; Department of Computer Science, University of Colorado, Boulder, CO, USA.
Neale BM; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA.
Salerno WJ; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.
Reeves C; New York Genome Center, New York, NY, USA.
Buyske S; Department of Statistics, Rutgers University, Piscataway, NJ, USA.
Matise TC; Department of Genetics, Rutgers University, Piscataway, NJ, USA.
Muzny DM; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.
Zody MC; New York Genome Center, New York, NY, USA.
Lander ES; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.; Department of Systems Biology, Harvard Medical School, Boston, MA, USA.
Dutcher SK; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO, USA.; Department of Genetics, Washington University School of Medicine, St Louis, MO, USA.
Stitziel NO; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO, USA.; Department of Genetics, Washington University School of Medicine, St Louis, MO, USA.; Department of Medicine, Washington University School of Medicine, St Louis, MO, USA.
Hall IM; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO, USA. ihall@genome.wustl.edu.; Department of Genetics, Washington University School of Medicine, St Louis, MO, USA. ihall@genome.wustl.edu.; Department of Medicine, Washington University School of Medicine, St Louis, MO, USA. ihall@genome.wustl.edu.
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Corporate Authors :
NHGRI Centers for Common Disease Genomics
Źródło :
Nature [Nature] 2020 Jul; Vol. 583 (7814), pp. 83-89. Date of Electronic Publication: 2020 May 27.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Genetic Variation*
Whole Genome Sequencing*
Genome, Human/*genetics
Alleles ; Case-Control Studies ; Continental Population Groups/genetics ; Epigenesis, Genetic ; Female ; Gene Dosage/genetics ; Genetics, Population ; High-Throughput Nucleotide Sequencing ; Humans ; Male ; Molecular Sequence Annotation ; Quantitative Trait Loci ; Software
Czasopismo naukowe
Tytuł :
Whole-genome sequencing of a sporadic primary immunodeficiency cohort.
Autorzy :
Thaventhiran JED; Cambridge Institute of Therapeutic Immunology and Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, Cambridge, UK. .; Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK. .; Medical Research Council Toxicology Unit, School of Biological Sciences, University of Cambridge, Cambridge, UK. .
Lango Allen H; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NHS Blood and Transplant, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.; Medical Research Council Epidemiology Unit, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.
Burren OS; Cambridge Institute of Therapeutic Immunology and Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, Cambridge, UK.; Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.
Rae W; Cambridge Institute of Therapeutic Immunology and Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, Cambridge, UK.; Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.
Greene D; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.; Medical Research Council Biostatistics Unit, Cambridge Institute of Public Health, Cambridge Biomedical Campus, Cambridge, UK.
Staples E; Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.
Zhang Z; Cambridge Institute of Therapeutic Immunology and Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, Cambridge, UK.; Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; Molecular Development of the Immune System Section, Laboratory of Immune System Biology and Clinical Genomics Program, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.
Farmery JHR; Medical Research Council Biostatistics Unit, Cambridge Institute of Public Health, Cambridge Biomedical Campus, Cambridge, UK.; Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.
Simeoni I; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.
Rivers E; UCL Great Ormond Street Institute of Child Health, London, UK.; Great Ormond Street Hospital for Children NHS Foundation Trust, London, UK.
Maimaris J; UCL Great Ormond Street Institute of Child Health, London, UK.; Great Ormond Street Hospital for Children NHS Foundation Trust, London, UK.
Penkett CJ; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.
Stephens J; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NHS Blood and Transplant, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.
Deevi SVV; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.
Sanchis-Juan A; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NHS Blood and Transplant, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.
Gleadall NS; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NHS Blood and Transplant, Cambridge Biomedical Campus, Cambridge, UK.
Thomas MJ; Department of Immunology, Queen Elizabeth University Hospital, Glasgow, UK.; Gartnavel General Hospital, NHS Greater Glasgow and Clyde, Glasgow, UK.
Sargur RB; Sheffield Teaching Hospitals NHS Foundation Trust, Sheffield, UK.; Department of Infection, Immunity and Cardiovascular Disease, University of Sheffield, Sheffield, UK.
Gordins P; East Yorkshire Regional Adult Immunology and Allergy Unit, Hull Royal Infirmary, Hull and East Yorkshire Hospitals NHS Trust, Hull, UK.
Baxendale HE; Cambridge Institute of Therapeutic Immunology and Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, Cambridge, UK.; Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; Royal Papworth Hospital NHS Foundation Trust, Cambridge, UK.
Brown M; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.
Tuijnenburg P; Department of Pediatric Immunology, Rheumatology and Infectious Diseases, Emma Children's Hospital, Amsterdam, The Netherlands.; Department of Experimental Immunology, Amsterdam University Medical Center (AMC), University of Amsterdam, Amsterdam, The Netherlands.
Worth A; UCL Great Ormond Street Institute of Child Health, London, UK.; Great Ormond Street Hospital for Children NHS Foundation Trust, London, UK.
Hanson S; Institute of Immunity and Transplantation, University College London, London, UK.; Department of Immunology, Royal Free London NHS Foundation Trust, London, UK.
Linger RJ; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.; Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK.
Buckland MS; Institute of Immunity and Transplantation, University College London, London, UK.; Department of Immunology, Royal Free London NHS Foundation Trust, London, UK.
Rayner-Matthews PJ; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.
Gilmour KC; UCL Great Ormond Street Institute of Child Health, London, UK.; Great Ormond Street Hospital for Children NHS Foundation Trust, London, UK.
Samarghitean C; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.
Seneviratne SL; Institute of Immunity and Transplantation, University College London, London, UK.; Department of Immunology, Royal Free London NHS Foundation Trust, London, UK.
Sansom DM; Institute of Immunity and Transplantation, University College London, London, UK.; Department of Immunology, Royal Free London NHS Foundation Trust, London, UK.
Lynch AG; Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.; School of Mathematics and Statistics, University of St Andrews, St Andrews, UK.; School of Medicine, University of St Andrews, St Andrews, UK.
Megy K; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.
Ellinghaus E; K.G. Jebsen Inflammation Research Centre, Institute of Clinical Medicine, University of Oslo, Oslo University Hospital, Oslo, Norway.
Ellinghaus D; Department of Transplantation, Institute of Clinical Medicine, University of Oslo, Oslo University Hospital, Oslo, Norway.; Institute of Clinical Molecular Biology, Christian Albrechts University of Kiel, Kiel, Germany.
Jorgensen SF; Section of Clinical Immunology and Infectious Diseases, Department of Rheumatology, Dermatology and Infectious Diseases, Oslo University Hospital, Oslo, Norway.; Research Institute of Internal Medicine, Division of Surgery, Inflammatory Diseases and Transplantation, Oslo University Hospital, Oslo, Norway.
Karlsen TH; K.G. Jebsen Inflammation Research Centre, Institute of Clinical Medicine, University of Oslo, Oslo University Hospital, Oslo, Norway.
Stirrups KE; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.
Cutler AJ; JDRF/Wellcome Diabetes and Inflammation Laboratory, Wellcome Centre for Human Genetics, Nuffield Department of Medicine, NIHR Oxford Biomedical Research Centre, University of Oxford, Oxford, UK.
Kumararatne DS; Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; Department of Clinical Biochemistry and Immunology, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.
Chandra A; Cambridge Institute of Therapeutic Immunology and Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, Cambridge, UK.; Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; Department of Clinical Biochemistry and Immunology, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.
Edgar JDM; St James's Hospital, Dublin, Ireland.; Trinity College Dublin, Dublin, Ireland.
Herwadkar A; Salford Royal NHS Foundation Trust, Salford, UK.
Cooper N; Department of Medicine, Imperial College London, London, UK.
Grigoriadou S; Barts Health NHS Foundation Trust, London, UK.
Huissoon AP; West Midlands Immunodeficiency Centre, University Hospitals Birmingham, Birmingham, UK.; Birmingham Heartlands Hospital, University Hospitals Birmingham NHS Foundation Trust, Birmingham, UK.
Goddard S; University Hospitals of North Midlands NHS Trust, Stoke-on-Trent, UK.
Jolles S; Immunodeficiency Centre for Wales, University Hospital of Wales, Cardiff, UK.
Schuetz C; Department of Pediatric Immunology, University Hospital Carl Gustav Carus, Dresden, Germany.
Boschann F; Institute of Medical Genetics and Human Genetics, Charité-Universitätsmedizin Berlin, Berlin, Germany.
Lyons PA; Cambridge Institute of Therapeutic Immunology and Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, Cambridge, UK.; Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.
Hurles ME; Department of Human Genetics, Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, UK.
Savic S; Department of Clinical Immunology and Allergy, St James's University Hospital, Leeds, UK.; The NIHR Leeds Biomedical Research Centre, Leeds, UK.; Leeds Institute of Rheumatic and Musculoskeletal Medicine, Leeds, UK.
Burns SO; Institute of Immunity and Transplantation, University College London, London, UK.; Department of Immunology, Royal Free London NHS Foundation Trust, London, UK.
Kuijpers TW; Department of Pediatric Immunology, Rheumatology and Infectious Diseases, Emma Children's Hospital, Amsterdam, The Netherlands.; Department of Experimental Immunology, Amsterdam University Medical Center (AMC), University of Amsterdam, Amsterdam, The Netherlands.; Department of Blood Cell Research, Sanquin, Amsterdam, The Netherlands.
Turro E; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NHS Blood and Transplant, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.; Medical Research Council Biostatistics Unit, Cambridge Institute of Public Health, Cambridge Biomedical Campus, Cambridge, UK.
Ouwehand WH; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK.; NHS Blood and Transplant, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, UK.
Thrasher AJ; UCL Great Ormond Street Institute of Child Health, London, UK.; Great Ormond Street Hospital for Children NHS Foundation Trust, London, UK.
Smith KGC; Cambridge Institute of Therapeutic Immunology and Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, Cambridge, UK. .; Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge Biomedical Campus, Cambridge, UK. .
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Corporate Authors :
Primary Immunodeficiency Consortium for the NIHR Bioresource
Źródło :
Nature [Nature] 2020 Jul; Vol. 583 (7814), pp. 90-95. Date of Electronic Publication: 2020 May 06.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Whole Genome Sequencing*
Primary Immunodeficiency Diseases/*genetics
Actin-Related Protein 2-3 Complex/genetics ; Bayes Theorem ; Cohort Studies ; Female ; Genome-Wide Association Study ; Humans ; Male ; Primary Immunodeficiency Diseases/diagnosis ; Primary Immunodeficiency Diseases/immunology ; Protein Tyrosine Phosphatase, Non-Receptor Type 2/genetics ; RNA-Binding Proteins/genetics ; Regulatory Sequences, Nucleic Acid/genetics ; Suppressor of Cytokine Signaling 1 Protein/genetics ; Transcription Factors/genetics
Czasopismo naukowe
Tytuł :
Whole-genome sequencing of patients with rare diseases in a national health system.
Autorzy :
Turro E; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK. .; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK. .; MRC Biostatistics Unit, Cambridge Institute of Public Health, University of Cambridge, Cambridge, UK. .
Astle WJ; MRC Biostatistics Unit, Cambridge Institute of Public Health, University of Cambridge, Cambridge, UK.; NHS Blood and Transplant, Cambridge Biomedical Campus, Cambridge, UK.
Megy K; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Gräf S; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.; Department of Medicine, School of Clinical Medicine, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.
Greene D; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; MRC Biostatistics Unit, Cambridge Institute of Public Health, University of Cambridge, Cambridge, UK.
Shamardina O; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Allen HL; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Sanchis-Juan A; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Frontini M; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NHS Blood and Transplant, Cambridge Biomedical Campus, Cambridge, UK.; British Heart Foundation Cambridge Centre of Excellence, University of Cambridge, Cambridge, UK.
Thys C; Department of Cardiovascular Sciences, Center for Molecular and Vascular Biology, KU Leuven, Leuven, Belgium.
Stephens J; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Mapeta R; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Burren OS; Department of Medicine, School of Clinical Medicine, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; Cambridge Institute of Therapeutic Immunology and Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, Cambridge, UK.
Downes K; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Haimel M; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.; Department of Medicine, School of Clinical Medicine, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.
Tuna S; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Deevi SVV; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Aitman TJ; MRC Clinical Sciences Centre, Faculty of Medicine, Imperial College London, London, UK.; Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK.
Bennett DL; The Nuffield Department of Clinical Neurosciences, University of Oxford, John Radcliffe Hospital, Oxford, UK.; NIHR Oxford Biomedical Research Centre, Oxford University Hospitals Trust, Oxford, UK.
Calleja P; High Performance Computing Service, University of Cambridge, Cambridge, UK.
Carss K; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Caulfield MJ; Genomics England Ltd, London, UK.; William Harvey Research Institute, NIHR Biomedical Research Centre at Barts, Queen Mary University of London, London, UK.
Chinnery PF; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.; Department of Clinical Neurosciences, School of Clinical Medicine, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; Medical Research Council Mitochondrial Biology Unit, Cambridge Biomedical Campus, Cambridge, UK.
Dixon PH; Women and Children's Health, School of Life Course Sciences, King's College London, London, UK.
Gale DP; Department of Renal Medicine, University College London, London, UK.; Rare Renal Disease Registry, UK Renal Registry, Bristol, UK.
James R; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Koziell A; King's College London, London, UK.; Department of Paediatric Nephrology, Evelina London Children's Hospital, Guy's & St Thomas' NHS Foundation Trust, London, UK.
Laffan MA; Department of Haematology, Hammersmith Hospital, Imperial College Healthcare NHS Trust, London, UK.; Centre for Haematology, Imperial College London, London, UK.
Levine AP; Department of Renal Medicine, University College London, London, UK.
Maher ER; Department of Medical Genetics, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR Cambridge Biomedical Research Centre, Cambridge Biomedical Campus, Cambridge, UK.; Cancer Research UK Cambridge Centre, Cambridge Biomedical Campus, Cambridge, UK.
Markus HS; Stroke Research Group, Department of Clinical Neurosciences, University of Cambridge, Cambridge Biomedical Campus, Bristol, UK.
Morales J; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Cambridge, UK.
Morrell NW; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.; Department of Medicine, School of Clinical Medicine, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.
Mumford AD; School of Cellular and Molecular Medicine, University of Bristol, Bristol, UK.; University Hospitals Bristol NHS Foundation Trust, Bristol, UK.
Ormondroyd E; NIHR Oxford Biomedical Research Centre, Oxford University Hospitals Trust, Oxford, UK.; Department of Cardiovascular Medicine, Radcliffe Department of Medicine, University of Oxford, Oxford, UK.
Rankin S; High Performance Computing Service, University of Cambridge, Cambridge, UK.
Rendon A; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; Genomics England Ltd, London, UK.
Richardson S; MRC Biostatistics Unit, Cambridge Institute of Public Health, University of Cambridge, Cambridge, UK.
Roberts I; NIHR Oxford Biomedical Research Centre, Oxford University Hospitals Trust, Oxford, UK.; MRC Molecular Haematology Unit, MRC Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, UK.; Department of Paediatrics, Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, UK.
Roy NBA; NIHR Oxford Biomedical Research Centre, Oxford University Hospitals Trust, Oxford, UK.; MRC Molecular Haematology Unit, MRC Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, UK.; Oxford University Hospitals NHS Foundation Trust, Oxford, UK.
Saleem MA; Bristol Renal and Children's Renal Unit, Bristol Medical School, University of Bristol, Bristol, UK.; Bristol Royal Hospital for Children, University Hospitals Bristol NHS Foundation Trust, Bristol, UK.
Smith KGC; Department of Medicine, School of Clinical Medicine, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; Cambridge Institute of Therapeutic Immunology and Infectious Disease, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, Cambridge, UK.
Stark H; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.; Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK.
Tan RYY; Stroke Research Group, Department of Clinical Neurosciences, University of Cambridge, Cambridge Biomedical Campus, Bristol, UK.
Themistocleous AC; The Nuffield Department of Clinical Neurosciences, University of Oxford, John Radcliffe Hospital, Oxford, UK.
Thrasher AJ; UCL Great Ormond Street Institute of Child Health, London, UK.
Watkins H; Department of Cardiovascular Medicine, Radcliffe Department of Medicine, University of Oxford, Oxford, UK.; Oxford University Hospitals NHS Foundation Trust, Oxford, UK.; Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.
Webster AR; Moorfields Eye Hospital NHS Trust, London, UK.; UCL Institute of Opthalmology, University College London, London, UK.
Wilkins MR; Department of Medicine, Imperial College London, London, UK.
Williamson C; Women and Children's Health, School of Life Course Sciences, King's College London, London, UK.; Institute of Reproductive and Developmental Biology, Department of Surgery and Cancer, Faculty of Medicine, Hammersmith Hospital, Imperial College Healthcare NHS Trust, London, UK.
Whitworth J; Department of Medical Genetics, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR Cambridge Biomedical Research Centre, Cambridge Biomedical Campus, Cambridge, UK.; Cancer Research UK Cambridge Centre, Cambridge Biomedical Campus, Cambridge, UK.
Humphray S; Illumina Cambridge, Little Chesterford, UK.
Bentley DR; Illumina Cambridge, Little Chesterford, UK.
Kingston N; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Walker N; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Bradley JR; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.; Department of Medicine, School of Clinical Medicine, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR Cambridge Biomedical Research Centre, Cambridge Biomedical Campus, Cambridge, UK.; Addenbrookes Hospital, Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK.; Department of Renal Medicine, Addenbrookes Hospital, Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK.
Ashford S; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.; Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK.
Penkett CJ; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Freson K; Department of Cardiovascular Sciences, Center for Molecular and Vascular Biology, KU Leuven, Leuven, Belgium.
Stirrups KE; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK.
Raymond FL; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK. .; Department of Medical Genetics, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK. .
Ouwehand WH; Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK. .; NIHR BioResource, Cambridge University Hospitals NHS Foundation, Cambridge Biomedical Campus, Cambridge, UK. .; NHS Blood and Transplant, Cambridge Biomedical Campus, Cambridge, UK. .; British Heart Foundation Cambridge Centre of Excellence, University of Cambridge, Cambridge, UK. .; Wellcome Sanger Institute, Cambridge, UK. .
Pokaż więcej
Corporate Authors :
NIHR BioResource for the 100,000 Genomes Project
Źródło :
Nature [Nature] 2020 Jul; Vol. 583 (7814), pp. 96-102. Date of Electronic Publication: 2020 Jun 24.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Internationality*
National Health Programs*
Whole Genome Sequencing*
Rare Diseases/*diagnosis
Rare Diseases/*genetics
Actin-Related Protein 2-3 Complex/genetics ; Adaptor Proteins, Signal Transducing/genetics ; Alleles ; Databases, Factual ; Erythrocytes/metabolism ; GATA1 Transcription Factor/genetics ; Humans ; Phenotype ; Quantitative Trait Loci ; Receptors, Thrombopoietin/genetics ; State Medicine ; United Kingdom
Czasopismo naukowe
Tytuł :
Whole-genome sequencing reveals origin and evolution of influenza A(H1N1)pdm09 viruses in Lincang, China, from 2014 to 2018.
Autorzy :
Zhao XN; Department of Acute Infectious Diseases Control and Prevention, Yunnan Provincial Center for Disease Control and Prevention, Kunming, Yunnan, China.
Zhang HJ; Lincang Center for Disease Control and Prevention, Lincang, Yunnan, China.
Li D; Department of Acute Infectious Diseases Control and Prevention, Yunnan Provincial Center for Disease Control and Prevention, Kunming, Yunnan, China.
Zhou JN; Department of Acute Infectious Diseases Control and Prevention, Yunnan Provincial Center for Disease Control and Prevention, Kunming, Yunnan, China.
Chen YY; Department of Acute Infectious Diseases Control and Prevention, Yunnan Provincial Center for Disease Control and Prevention, Kunming, Yunnan, China.
Sun YH; Department of Acute Infectious Diseases Control and Prevention, Yunnan Provincial Center for Disease Control and Prevention, Kunming, Yunnan, China.
Adeola AC; State Key Laboratory of Genetic Resources and Evolution, Chinese Academy of Sciences, Kunming Institute of Zoology, Kunming, Yunnan, China.
Fu XQ; Department of Acute Infectious Diseases Control and Prevention, Yunnan Provincial Center for Disease Control and Prevention, Kunming, Yunnan, China.
Shao Y; State Key Laboratory of Genetic Resources and Evolution, Chinese Academy of Sciences, Kunming Institute of Zoology, Kunming, Yunnan, China.
Zhang ML; Department of Acute Infectious Diseases Control and Prevention, Yunnan Provincial Center for Disease Control and Prevention, Kunming, Yunnan, China.
Pokaż więcej
Źródło :
PloS one [PLoS One] 2020 Jun 24; Vol. 15 (6), pp. e0234869. Date of Electronic Publication: 2020 Jun 24 (Print Publication: 2020).
Typ publikacji :
Journal Article
MeSH Terms :
Evolution, Molecular*
Whole Genome Sequencing*
Influenza A Virus, H1N1 Subtype/*genetics
Amino Acid Sequence ; China ; DNA Mutational Analysis ; Demography ; Epitopes/chemistry ; Hemagglutinin Glycoproteins, Influenza Virus/genetics ; Humans ; Influenza Vaccines/immunology ; Mutation/genetics ; Neuraminidase/genetics ; Phylogeny ; Treatment Outcome
Czasopismo naukowe

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