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Wyszukujesz frazę ""Whole Genome Sequencing methods"" wg kryterium: Wszystkie pola


Tytuł :
Comparison of conventional molecular and whole-genome sequencing methods for subtyping Salmonella enterica serovar Enteritidis strains from Tunisia
Autorzy :
Ksibi, Boutheina
Ktari, SoniaAff1, Aff2
Othman, Houcemeddine
Ghedira, Kais
Maalej, Sonda
Mnif, Basma
Abbassi, Mohamed salah
Fabre, Laetitia
Rhimi, Faouzia
Le Hello, SimonAff6, Aff7
Hammami, Adnene
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Źródło :
European Journal of Clinical Microbiology & Infectious Diseases. 40(3):597-606
Czasopismo naukowe
Tytuł :
Phylogenetic surveillance of travel-related Zika virus infections through whole-genome sequencing methods
Autorzy :
Kimia Kamelian
Vincent Montoya
Andrea Olmstead
Winnie Dong
Richard Harrigan
Muhammad Morshed
Jeffrey B. Joy
Pokaż więcej
Temat :
Medicine
Science
Źródło :
Scientific Reports, Vol 9, Iss 1, Pp 1-10 (2019)
Opis pliku :
electronic resource
Relacje :
http://link.springer.com/article/10.1038/s41598-019-52613-8; https://doaj.org/toc/2045-2322
Dostęp URL :
https://doaj.org/article/48718d2551ef4bb0b6b2c36c68478399
Czasopismo naukowe
Tytuł :
A joint cross-border investigation of a cluster of multidrug-resistant tuberculosis in Austria, Romania and Germany in 2014 using classic, genotyping and whole genome sequencing methods: lessons learnt
Autorzy :
Fiebig, Lena
Kohl, Thomas A.
Popovici, O.
Mühlenfeld, M.
Indra, A.
Homorodean, D.
Chiotan, D.
Richter, E.
Rüsch-Gerdes, Sabine
Schmidgruber, B.
Beckert, P.
Hauer, Barbara
Niemann, Stefan
Allerberger, Franz
Haas, Walter
Pokaż więcej
Temat :
ddc:610
610 Medizin
Opis pliku :
application/pdf
Tytuł :
Investigation of a staphylococcal food poisoning outbreak combining case–control, traditional typing and whole genome sequencing methods, Luxembourg, June 2014
Autorzy :
Mossong, J
DeCruyenaere, F
Moris, G
Ragimbeau, C
Olinger, Ch
Johler, Sophia
Perrin, M
Hau, P
Weicherding, P
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Temat :
Institute of Food Safety and Hygiene
610 Medicine & health
570 Life sciences
biology
Luxembourg, Staphylococcus aureus, Whole genome sequencing, case–control study, colonisation, food poisoning
Źródło :
Mossong, J; DeCruyenaere, F; Moris, G; Ragimbeau, C; Olinger, Ch; Johler, Sophia; Perrin, M; Hau, P; Weicherding, P (2015). Investigation of a staphylococcal food poisoning outbreak combining case–control, traditional typing and whole genome sequencing methods, Luxembourg, June 2014. Eurosurveillance, 20(45):pii=30059.
Opis pliku :
application/pdf
Tytuł :
Improving the quality and workflow of bacterial genome sequencing and analysis: paving the way for a Switzerland-wide molecular epidemiological surveillance platform.
Autorzy :
Egli, Adrian
Blanc, Dominique S
Greub, Gilbert
Keller, Peter M
Lazarevic, Vladimir
Lebrand, Aitana
Leib, Stephen
Neher, Richard A
Perreten, Vincent
Ramette, Alban
Schrenzel, Jacques
Stephan, Roger
Wagner, Karolin
Wuethrich, Daniel
Xenarios, Ioannis
Pokaż więcej
Temat :
Workflow
ddc:616
610 Medicine & health
Switzerland
Molecular Typing/methods
Bacteria/genetics
Bacteria/pathogenicity
Disease Outbreaks
Drug Resistance, Microbial
Genome, Bacterial/genetics
Humans
Molecular Epidemiology/organization & administration
Population Surveillance/methods
Whole Genome Sequencing/methods
Whole Genome Sequencing/standards
ddc:616.07
Microbial
Institute of Medical Microbiology
Bacterial/genetics
Genome
Institute of Food Safety and Hygiene
Bacteria/genetics/pathogenicity
630 Agriculture
Drug Resistance
Whole Genome Sequencing/methods/standards
570 Life sciences
biology
Źródło :
Egli, Adrian; Blanc, Dominique S; Greub, Gilbert; Keller, Peter Michael; Lazarevic, Vladimir; Lebrand, Aitana; Leib, Stephen; Neher, Richard A; Perreten, Vincent; Ramette, Alban; Schrenzel, Jacques; Stephan, Roger; Wagner, Karolin; Wuethrich, Daniel; Xenarios, Ioannis (2018). Improving the quality and workflow of bacterial genome sequencing and analysis: paving the way for a Switzerland-wide molecular epidemiological surveillance platform. Swiss medical weekly, 148(w14693), w14693. EMH Media 10.4414/smw.2018.14693
Egli, Adrian; Blanc, Dominique S; Greub, Gilbert; Keller, Peter M; Lazarevic, Vladimir; Lebrand, Aitana; Leib, Stephen; Neher, Richard A; Perreten, Vincent; Ramette, Alban; Schrenzel, Jacques; Stephan, Roger; Wagner, Karolin; Wuethrich, Daniel; Xenarios, Ioannis (2018). Improving the quality and workflow of bacterial genome sequencing and analysis: paving the way for a Switzerland-wide molecular epidemiological surveillance platform. Swiss Medical Weekly, 148:w14693.
Swiss Medical Weekly, Vol. 148, No w14693 (2018) pp. 1-10
Swiss medical weekly, vol. 148, pp. w14693
Opis pliku :
application/pdf
Tytuł :
Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci
Autorzy :
Azarian, Taj
Mitchell, Patrick K.
Georgieva, Maria
Pollard, Andrew J.
du Plessis, Mignon
Clarke, Stuart C.
Sadowy, Ewa
Hryniewicz, Waleria
Skoczynska, Anna
Ho, PL
Reid, Raymond
O’Brien, Katherine L.
Gladstone, Rebecca A.
Hanage, William P.
Thompson, Claudette M.
Ghouila, Amel
von Gottberg, Anne
Antonio, Martin
Kwambana-Adams, Brenda A.
Everett, Dean
Cornick, Jennifer
Moïsi, Jennifer C.
McGee, Lesley
Beall, Bernard
Metcalf, Benjamin J.
Breiman, Robert F.
Bentley, Stephen D.
Pokaż więcej
Temat :
Immune System Proteins
RC581-607
Antigenic Variation
MESH: Serogroup
Infectious Diseases
Taxonomy
Immunologic diseases. Allergy
Antimicrobial Resistance
Geography
Pharmacology
Immunology
MESH: Serotyping/methods
MESH: Whole Genome Sequencing/methods
MESH: Pneumococcal Infections/transmission
Biology and Life Sciences
Computer and Information Sciences
MESH: Streptococcus pneumoniae/genetics
Physiology
Mobile Genetic Elements
Antigens
MESH: Carrier State/epidemiology
MESH: Vaccines, Conjugate
[SDV]Life Sciences [q-bio]
MESH: Phylogeny
MESH: Pneumococcal Vaccines/immunology
MESH: Streptococcus pneumoniae/pathogenicity
Microbial Control
MESH: Population Dynamics
Research Article
Data Management
Earth Sciences
Vaccines
Infectious Disease Control
Ecology and Environmental Sciences
MESH: Genetics, Population/methods
Phylogeography
Evolutionary Biology
Genetics
Antibiotic Resistance
Proteins
Phylogenetics
Genomics
Evolutionary Systematics
Genetic Elements
Polysaccharides
Population Genetics
Biogeography
Immune Physiology
MESH: Bayes Theorem
Recombinant Proteins
Microbiology
MESH: Humans
MESH: Prevalence
QH301-705.5
Population Biology
MESH: Evolution, Molecular
Biochemistry
MESH: Pneumococcal Infections/immunology
Medicine and Health Sciences
Transposable Elements
Biology (General)
Glycobiology
MESH: Streptococcus pneumoniae/immunology
Źródło :
PLoS Pathogens, Public Library of Science, 2018, 14 (11), pp.e1007438. ⟨10.1371/journal.ppat.1007438⟩
PLoS Pathogens, Vol 14, Iss 11, p e1007438 (2018)
Azarian, T, Mitchell, P K, Georgieva, M, Thompson, C M, Ghouila, A, Pollard, A J, von Gottberg, A, du Plessis, M, Antonio, M, Kwambana-Adams, B A, Clarke, S C, Everett, D, Cornick, J, Sadowy, E, Hryniewicz, W, Skoczynska, A, Moïsi, J C, McGee, L, Beall, B, Metcalf, B J, Breiman, R F, Ho, P L, Reid, R, O'Brien, K L, Gladstone, R A, Bentley, S D & Hanage, W P 2018, ' Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci ', Plos Pathogens, vol. 14, no. 11, pp. e1007438 . https://doi.org/10.1371/journal.ppat.1007438
Opis pliku :
application/pdf; text
Tytuł :
Comparison of the Multiple Platforms to Identify Various Aeromonas Species.
Autorzy :
Du, Xiaoli
Wang, Mengyu
Zhou, Haijian
Li, Zhenpeng
Xu, Jialiang
Li, Zhe
Kan, Biao
Chen, Daoli
Wang, Xiaoli
Jin, Yujuan
Ren, Yan
Ma, Yanping
Liu, Jiuyin
Luan, Yang
Cui, Zhigang
Lu, Xin
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Temat :
AEROMONAS
MULTIPLE comparisons (Statistics)
NUCLEOTIDE sequencing
MASS spectrometry
SPECIES
GENE amplification
Źródło :
Frontiers in Microbiology; 1/18/2021, Vol. 11, pN.PAG-N.PAG, 8p
Czasopismo naukowe
Tytuł :
Genetic characterization of Shigatoxigenic and enteropathogenic Escherichia coli O80:H2 from diarrhoeic and septicaemic calves and relatedness to human Shigatoxigenic E. coli O80:H2.
Autorzy :
Habets, A.
Crombé, F.
Nakamura, K.
Guérin, V.
De Rauw, K.
Piérard, D.
Saulmont, M.
Hayashi, T.
Mainil, J.G.
Thiry, D.
Pokaż więcej
Temat :
ESCHERICHIA coli O157:H7
ESCHERICHIA coli
GASTROINTESTINAL contents
NUCLEOTIDE sequencing
BOS
Źródło :
Journal of Applied Microbiology; Jan2021, Vol. 130 Issue 1, p258-264, 7p
Terminy geograficzne :
BELGIUM
Czasopismo naukowe
Tytuł :
A maximum flow-based network approach for identification of stable noncoding biomarkers associated with the multigenic neurological condition, autism.
Autorzy :
Varma, Maya (AUTHOR)
Paskov, Kelley M. (AUTHOR)
Chrisman, Brianna S. (AUTHOR)
Sun, Min Woo (AUTHOR)
Jung, Jae-Yoon (AUTHOR)
Stockham, Nate T. (AUTHOR)
Washington, Peter Y. (AUTHOR)
Wall, Dennis P. (AUTHOR)
Pokaż więcej
Źródło :
BioData Mining. 5/3/2021, Vol. 14 Issue 1, p1-15. 15p.
Czasopismo naukowe
Tytuł :
Low rate of relapse after twelve-dose multidrug therapy for hansen's disease: A 20-year cohort study in a brazilian reference center.
Autorzy :
Nery, José A. C. (AUTHOR)
Sales, Anna M. (AUTHOR)
Hacker, Mariana A. V. B. (AUTHOR)
Moraes, Milton O. (AUTHOR)
Maia, Raquel C. (AUTHOR)
Sarno, Euzenir N. (AUTHOR)
Illarramendi, Ximena (AUTHOR)
Pokaż więcej
Źródło :
PLoS Neglected Tropical Diseases. 5/3/2021, Vol. 15 Issue 5, p1-12. 12p.
Czasopismo naukowe
Tytuł :
Precision medicine identifies a pathogenic variant of the ITGA2B gene responsible for Glanzmann's thrombasthenia in a cat.
Autorzy :
Li, Ronald H. L.
Ontiveros, Eric
Nguyen, Nghi
Stern, Joshua A.
Lee, Elizabeth
Hardy, Brian T.
Pokaż więcej
Temat :
INDIVIDUALIZED medicine
ADENOSINE diphosphate
BLOOD platelets
BLOOD platelet aggregation
URETHRAL obstruction
EXOMES
Źródło :
Journal of Veterinary Internal Medicine; Nov2020, Vol. 34 Issue 6, p2438-2446, 9p
Czasopismo naukowe
Tytuł :
Genomic Analysis of Heterogeneous Vancomycin-Intermediate Staphylococcus aureus Strains from Different Clonal Lineages in South Korea.
Autorzy :
Park C; Vaccine Bio Research Institute, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea.
Rho K; Precision Medicine Research Center, Integrated Research Center for Genome Polymorphism, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea.; NosVet, A315-4, 767, Sinsu-ro, Suji-gu, Yongin-si, Gyeonggi-do, Republic of Korea.
Shin J; Department of Biomedicine & Health Sciences, Microbiology, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea.
Cho SY; Vaccine Bio Research Institute, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea.; Division of Infectious Diseases, Department of Internal Medicine, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea.
Lee DG; Vaccine Bio Research Institute, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea.; Division of Infectious Diseases, Department of Internal Medicine, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea.
Chung YJ; Precision Medicine Research Center, Integrated Research Center for Genome Polymorphism, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea.; Department of Biomedicine & Health Sciences, Microbiology, College of Medicine, The Catholic University of Korea, Seoul, Republic of Korea.
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Źródło :
Microbial drug resistance (Larchmont, N.Y.) [Microb Drug Resist] 2021 Mar 10. Date of Electronic Publication: 2021 Mar 10.
Typ publikacji :
Journal Article
Czasopismo naukowe
Tytuł :
Multiplex ligation-dependent probe amplification analysis is useful for detecting a copy number gain of the FGFR1 tyrosine kinase domain in dysembryoplastic neuroepithelial tumors.
Autorzy :
Matsumura, Nozomi
Nobusawa, Sumihito
Ito, Junko
Kakita, Akiyoshi
Suzuki, Hiroyoshi
Fujii, Yukihiko
Fukuda, Masafumi
Iwasaki, Masaki
Nakasato, Nobukazu
Tominaga, Teiji
Natsume, Atsushi
Mikami, Yoshiki
Shinojima, Naoki
Yamazaki, Tatsuya
Nakazato, Yoichi
Hirato, Junko
Yokoo, Hideaki
Pokaż więcej
Źródło :
Journal of Neuro-Oncology; May2019, Vol. 143 Issue 1, p27-33, 7p
Czasopismo naukowe
Tytuł :
The NYCKidSeq project: study protocol for a randomized controlled trial incorporating genomics into the clinical care of diverse New York City children.
Autorzy :
Odgis, Jacqueline A. (AUTHOR)
Gallagher, Katie M. (AUTHOR)
Suckiel, Sabrina A. (AUTHOR)
Donohue, Katherine E. (AUTHOR)
Ramos, Michelle A. (AUTHOR)
Kelly, Nicole R. (AUTHOR)
Bertier, Gabrielle (AUTHOR)
Blackburn, Christina (AUTHOR)
Brown, Kaitlyn (AUTHOR)
Fielding, Lena (AUTHOR)
Lopez, Jessenia (AUTHOR)
Aguiniga, Karla Lopez (AUTHOR)
Maria, Estefany (AUTHOR)
Rodriguez, Jessica E. (AUTHOR)
Sebastin, Monisha (AUTHOR)
Teitelman, Nehama (AUTHOR)
Watnick, Dana (AUTHOR)
Yelton, Nicole M. (AUTHOR)
Abhyankar, Avinash (AUTHOR)
Abul-Husn, Noura S. (AUTHOR)
Pokaż więcej
Źródło :
Trials. 1/14/2021, Vol. 22 Issue 1, p1-14. 14p. 2 Diagrams, 2 Charts.
Czasopismo naukowe
Tytuł :
Fructanogenic traits in halotolerant Bacillus licheniformis OK12 and their predicted functional significance.
Autorzy :
Kırtel O; Industrial Biotechnology and Systems Biology Research Group-IBSB, Bioengineering Department, Göztepe Campus, Marmara University, Istanbul, Turkey.
Aydın H; Industrial Biotechnology and Systems Biology Research Group-IBSB, Bioengineering Department, Göztepe Campus, Marmara University, Istanbul, Turkey.
Toksoy Öner E; Industrial Biotechnology and Systems Biology Research Group-IBSB, Bioengineering Department, Göztepe Campus, Marmara University, Istanbul, Turkey.
Pokaż więcej
Źródło :
Journal of applied microbiology [J Appl Microbiol] 2021 Jan 23. Date of Electronic Publication: 2021 Jan 23.
Typ publikacji :
Journal Article
Czasopismo naukowe
Tytuł :
Whole-genome sequencing of rough Brucella melitensis in China provides insights into its genetic features.
Autorzy :
Yang X; State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Piao D; State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Mao L; Liaoning Province Center for Disease Control and Prevention, Shenyang, People's Republic of China.
Pang B; State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Zhao H; State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Tian G; State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Jiang H; State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Kan B; State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
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Źródło :
Emerging microbes & infections [Emerg Microbes Infect] 2020 Dec; Vol. 9 (1), pp. 2147-2156.
Typ publikacji :
Journal Article
Czasopismo naukowe
Tytuł :
Hospital Epidemiology of Methicillin-Resistant Staphylococcus aureus in a Tertiary Care Hospital in Moshi, Tanzania, as Determined by Whole Genome Sequencing.
Autorzy :
Kumburu, Happiness H.
Sonda, Tolbert
Leekitcharoenphon, Pimlapas
van Zwetselaar, Marco
Lukjancenko, Oksana
Alifrangis, Michael
Lund, Ole
Mmbaga, Blandina T.
Kibiki, Gibson
Aarestrup, Frank M.
Pokaż więcej
Źródło :
BioMed Research International. 1/2/2018, Vol. 2018, p1-12. 12p.
Czasopismo naukowe
Tytuł :
Risk factors for type 1 diabetes, including environmental, behavioural and gut microbial factors: a case–control study.
Autorzy :
Traversi, Deborah
Rabbone, Ivana
Scaioli, Giacomo
Vallini, Camilla
Carletto, Giulia
Racca, Irene
Ala, Ugo
Durazzo, Marilena
Collo, Alessandro
Ferro, Arianna
Carrera, Deborah
Savastio, Silvia
Cadario, Francesco
Siliquini, Roberta
Cerutti, Franco
Pokaż więcej
Źródło :
Scientific Reports. 10/16/2020, Vol. 10 Issue 1, p1-13. 13p.
Czasopismo naukowe
Tytuł :
Long‐read wholegenome sequencing for the genetic diagnosis of dystrophinopathies.
Autorzy :
Xie, Zhiying (AUTHOR)
Sun, Chengyue (AUTHOR)
Zhang, Siwen (AUTHOR)
Liu, Yilin (AUTHOR)
Yu, Meng (AUTHOR)
Zheng, Yiming (AUTHOR)
Meng, Lingchao (AUTHOR)
Acharya, Anushree (AUTHOR)
Cornejo‐Sanchez, Diana M (AUTHOR)
Wang, Gao (AUTHOR)
Zhang, Wei (AUTHOR)
Schrauwen, Isabelle (AUTHOR)
Leal, Suzanne M. (AUTHOR)
Wang, Zhaoxia (AUTHOR)
Yuan, Yun (AUTHOR)
Pokaż więcej
Źródło :
Annals of Clinical & Translational Neurology. Oct2020, Vol. 7 Issue 10, p2041-2046. 6p.
Czasopismo naukowe
Tytuł :
Estimating the costs of genomic sequencing in cancer control.
Autorzy :
Gordon, Louisa G. (AUTHOR)
White, Nicole M. (AUTHOR)
Elliott, Thomas M. (AUTHOR)
Nones, Katia (AUTHOR)
Beckhouse, Anthony G. (AUTHOR)
Rodriguez-Acevedo, Astrid J. (AUTHOR)
Webb, Penelope M. (AUTHOR)
Lee, Xing J. (AUTHOR)
Graves, Nicholas (AUTHOR)
Schofield, Deborah J. (AUTHOR)
Pokaż więcej
Źródło :
BMC Health Services Research. 6/3/2020, Vol. 20 Issue 1, p1-11. 11p. 1 Diagram, 3 Charts, 1 Graph.
Czasopismo naukowe

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