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Tytuł :
Draft Genome Sequences of New Isolates and the Known Species of the Family Microbacteriaceae Associated with Plants
Autorzy :
Vasilenko, OV
Starodumova, IP
Dorofeeva, LV
Tarlachkov, SV
Prisyazhnaya, NV
Chizhov, VN
Subbotin, SA
Huntemann, M
Clum, A
Duffy, K
Pillay, M
Palaniappan, K
Varghese, N
Chen, IMA
Stamatis, D
Reddy, TBK
O'Malley, R
Daum, C
Shapiro, N
Ivanova, N
Kyrpides, NC
Woyke, T
Whitman, WB
Evtushenko, LI
Pokaż więcej
Temat :
Genome Sequences
Źródło :
Microbiology Resource Announcements
Vasilenko, OV; Starodumova, IP; Dorofeeva, LV; Tarlachkov, SV; Prisyazhnaya, NV; Chizhov, VN; et al.(2018). Draft genome sequences of new isolates and the known species of the family microbacteriaceae associated with plants. Microbiology Resource Announcements, 7(11). doi: 10.1128/MRA.01051-18. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/7v5781mj
Opis pliku :
application/pdf
Tytuł :
Capturing the genetic makeup of the active microbiome in situ
Autorzy :
Singer, E
Wagner, M
Woyke, T
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Temat :
Microbiota
Bacteria
Environmental Microbiology
Ecosystem
Microbiology
Mini Review
Genetic Techniques
Environmental Sciences
Technology
Biological Sciences
Źródło :
The ISME journal, vol 11, iss 9
Singer, E; Wagner, M; & Woyke, T. (2017). Capturing the genetic makeup of the active microbiome in situ. ISME Journal, 11(9), 1949 - 1963. doi: 10.1038/ismej.2017.59. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/0nm5z1jj
Opis pliku :
application/pdf
Tytuł :
High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460.
Autorzy :
Matrosova, VY
Gaidamakova, EK
Makarova, KS
Grichenko, O
Klimenkova, P
Volpe, RP
Tkavc, R
Ertem, G
Conze, IH
Brambilla, E
Huntemann, M
Clum, A
Pillay, M
Palaniappan, K
Varghese, N
Mikhailova, N
Stamatis, D
Reddy, TBK
Daum, C
Shapiro, N
Ivanova, N
Kyrpides, N
Woyke, T
Daligault, H
Davenport, K
Erkkila, T
Goodwin, LA
Gu, W
Munk, C
Teshima, H
Xu, Y
Chain, P
Woolbert, M
Gunde-Cimerman, N
Wolf, YI
Grebenc, T
Gostinčar, C
Daly, MJ
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Temat :
2.2 Factors relating to physical environment
Biochemistry and Cell Biology
bacteria
Radiation-resistant
Deinococcus ficus
QH426-470
Phylogenetic analysis
Genetics
Deinococcus-Thermus
Phenotype characterization
Extended Genome Report
Genome analysis
Deinococcaceae
Rod-shaped
Źródło :
Matrosova, VY; Gaidamakova, EK; Makarova, KS; Grichenko, O; Klimenkova, P; Volpe, RP; et al.(2017). High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460. Standards in Genomic Sciences, 12(1). doi: 10.1186/s40793-017-0258-y. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/1m6338fx
Standards in Genomic Sciences, vol 12, iss 1
Standards in Genomic Sciences
Standards in Genomic Sciences, Vol 12, Iss 1, Pp 1-11 (2017)
Opis pliku :
application/pdf
Tytuł :
1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life.
Autorzy :
Mukherjee, S
Seshadri, R
Varghese, NJ
Eloe-Fadrosh, EA
Meier-Kolthoff, JP
Göker, M
Coates, RC
Hadjithomas, M
Pavlopoulos, GA
Paez-Espino, D
Yoshikuni, Y
Visel, A
Whitman, WB
Garrity, GM
Eisen, JA
Hugenholtz, P
Pati, A
Ivanova, NN
Woyke, T
Klenk, HP
Kyrpides, NC
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Temat :
Genetic
Databases
Reference Values
Datasets as Topic
Biotechnology
Infection
Archaeal
High-Throughput Nucleotide Sequencing
Database Management Systems
Genome
Knowledge Bases
Bacterial
Genetics
Encyclopedias as Topic
Chromosome Mapping
Źródło :
Nature biotechnology, vol 35, iss 7
Mukherjee, S; Seshadri, R; Varghese, NJ; Eloe-Fadrosh, EA; Meier-Kolthoff, JP; Göker, M; et al.(2017). 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. Nature Biotechnology, 35(7), 676 - 683. doi: 10.1038/nbt.3886. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/7cx5710p
Opis pliku :
application/pdf
Tytuł :
Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer
Autorzy :
Gregory, A. C.
Solonenko, S. A.
Ignacio-Espinoza, J. C.
LaButti, K.
Copeland, A.
Sudek, S.
Maitland, A.
Chittick, L.
dos Santos, F.
Weitz, J. S.
Worden, Alexandra Z.
Woyke, T.
Sullivan, M. B.
Pokaż więcej
Temat :
Biotechnology
Information and Computing Sciences
Research Article
Bacteriophages
Bacteriophage
Virus
Horizontal
1.1 Normal biological development and functioning
Genetics
Double-stranded DNA
DNA
Cyanophage
Sequence Analysis
Phage
Gene Transfer
Biological Evolution
Genetic Linkage
Evolution
Comparative Genomic Hybridization
Double stranded DNA
Biological Sciences
Medical and Health Sciences
Genome
Species
Metagenomics
Bioinformatics
Human Genome
Phylogeny
Viral
Host Specificity
Źródło :
BMC Genomics, 17 (1). Art.Nr. 930.
BMC genomics, vol 17, iss 1
Gregory, AC; Solonenko, SA; Ignacio-Espinoza, JC; LaButti, K; Copeland, A; Sudek, S; et al.(2016). Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer. BMC Genomics, 17(1). doi: 10.1186/s12864-016-3286-x. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/36056038
Opis pliku :
text; application/pdf
Tytuł :
Single-cell sequencing of Thiomargarita reveals genomic flexibility for adaptation to dynamic redox conditions
Autorzy :
Winkel, M.
Salman-Carvalho, V.
Woyke, T.
Richter, M.
Schulz-Vogt, H.
Flood, B.
Bailey, J.
Mußmann, M.
Pokaż więcej
Temat :
“Candidatus Thiomargarita nelsonii”
"Candidatus Thiomargarita nelsonii"
cyanobacteria
sulfur-oxidizing bacteria
Microbiology
C2-cycle
Original Research
single-cell genome
multiple-displacement amplification
Źródło :
Winkel, M; Salman-Carvalho, V; Woyke, T; Richter, M; Schulz-Vogt, HN; Flood, BE; et al.(2016). Single-cell sequencing of Thiomargarita reveals genomic flexibility for adaptation to dynamic redox conditions. Frontiers in Microbiology, 7(JUN). doi: 10.3389/fmicb.2016.00964. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/4rs48000
Frontiers in Microbiology
Frontiers in microbiology, vol 7, iss JUN
Opis pliku :
application/pdf
Tytuł :
Insights into the single cell draft genome of 'Candidatus Achromatium palustre'.
Autorzy :
Salman, V
Berben, T
Bowers, RM
Woyke, T
Teske, A
Angert, ER
Pokaż więcej
Temat :
Biochemistry and Cell Biology
Thiotrichaceae
Calcium carbonate
Genetics
Large sulfide-oxidizing bacteria
Sippewissett Salt Marsh
"Candidatus Achromatium palustre"
“Candidatus Achromatium palustre”
Short Genome Report
Źródło :
Standards in Genomic Sciences, vol 11, iss 1
Salman, V; Berben, T; Bowers, RM; Woyke, T; Teske, A; & Angert, ER. (2016). Insights into the single cell draft genome of "Candidatus Achromatium palustre". Standards in Genomic Sciences, 11(1). doi: 10.1186/s40793-016-0146-x. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/6jv4970z
Standards in Genomic Sciences, 11. Michigan State University
Standards in Genomic Sciences
Opis pliku :
application/pdf

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