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Tytuł:
An iteration model for identifying essential proteins by combining comprehensive PPI network with biological information.
Autorzy:
Li S; College of Computer Engineering and Applied Mathematics, Changsha University, Changsha, 410022, China.; Hunan Province Key Laboratory of Industrial Internet Technology and Security, Changsha University, Changsha, 410022, China.
Zhang Z; College of Electronic Information and Electrical Engineering, Changsha University, Changsha, 410022, China.
Li X; College of Computer Engineering and Applied Mathematics, Changsha University, Changsha, 410022, China.; Hunan Province Key Laboratory of Industrial Internet Technology and Security, Changsha University, Changsha, 410022, China.
Tan Y; College of Computer Engineering and Applied Mathematics, Changsha University, Changsha, 410022, China. .; Hunan Province Key Laboratory of Industrial Internet Technology and Security, Changsha University, Changsha, 410022, China. .
Wang L; College of Computer Engineering and Applied Mathematics, Changsha University, Changsha, 410022, China.; Hunan Province Key Laboratory of Industrial Internet Technology and Security, Changsha University, Changsha, 410022, China.
Chen Z; College of Computer Engineering and Applied Mathematics, Changsha University, Changsha, 410022, China. .; Hunan Province Key Laboratory of Industrial Internet Technology and Security, Changsha University, Changsha, 410022, China. .
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Źródło:
BMC bioinformatics [BMC Bioinformatics] 2021 Sep 08; Vol. 22 (1), pp. 430. Date of Electronic Publication: 2021 Sep 08.
Typ publikacji:
Journal Article
MeSH Terms:
Computational Biology*
Protein Interaction Maps*
Algorithms ; Protein Interaction Mapping ; Proteins/genetics ; Proteins/metabolism ; Saccharomyces cerevisiae/genetics ; Saccharomyces cerevisiae/metabolism
Czasopismo naukowe
Tytuł:
Candidate gene-environment interactions in substance abuse: A systematic review.
Autorzy:
Jiang Z; Jockey Club School of Public Health and Primary Care, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong, Hong Kong.
Chen Z; Jockey Club School of Public Health and Primary Care, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong, Hong Kong.
Chen X; Jockey Club School of Public Health and Primary Care, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong, Hong Kong.; Department of Sociology and Social Policy, Lingnan University, Tuen Mun, Hong Kong.
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Źródło:
PloS one [PLoS One] 2023 Oct 31; Vol. 18 (10), pp. e0287446. Date of Electronic Publication: 2023 Oct 31 (Print Publication: 2023).
Typ publikacji:
Systematic Review; Journal Article
MeSH Terms:
Gene-Environment Interaction*
Substance-Related Disorders*/genetics
Humans ; Male ; Female
Czasopismo naukowe
Tytuł:
The development of proximity labeling technology and its applications in mammals, plants, and microorganisms.
Autorzy:
Guo J; School of Basic Medical Sciences, Xianning Medical College, Hubei University of Science and Technology, Xianning, Hubei, 437000, China.; School of Pharmacy, Xianning Medical College, Hubei University of Science and Technology, Xianning, Hubei, 437000, China.
Guo S; Medicine Research Institute, Hubei Key Laboratory of Diabetes and Angiopathy, Xianning Medical College, Hubei University of Science and Technology, Xianning, Hubei, 437000, China.
Lu S; School of Basic Medical Sciences, Xianning Medical College, Hubei University of Science and Technology, Xianning, Hubei, 437000, China.; School of Pharmacy, Xianning Medical College, Hubei University of Science and Technology, Xianning, Hubei, 437000, China.
Gong J; School of Pharmacy, Xianning Medical College, Hubei University of Science and Technology, Xianning, Hubei, 437000, China.
Wang L; School of Basic Medical Sciences, Xianning Medical College, Hubei University of Science and Technology, Xianning, Hubei, 437000, China.
Ding L; School of Pharmacy, Xianning Medical College, Hubei University of Science and Technology, Xianning, Hubei, 437000, China.
Chen Q; School of Pharmacy, Xianning Medical College, Hubei University of Science and Technology, Xianning, Hubei, 437000, China. .
Liu W; School of Basic Medical Sciences, Xianning Medical College, Hubei University of Science and Technology, Xianning, Hubei, 437000, China. .
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Źródło:
Cell communication and signaling : CCS [Cell Commun Signal] 2023 Sep 30; Vol. 21 (1), pp. 269. Date of Electronic Publication: 2023 Sep 30.
Typ publikacji:
Video-Audio Media; Journal Article; Review; Research Support, Non-U.S. Gov't
MeSH Terms:
Proteins*
Protein Interaction Maps*
Animals ; Mammals
Czasopismo naukowe
Tytuł:
Critical components of social prescribing programmes with a focus on older adults - a systematic review.
Autorzy:
Rapo E; Department of Community Medicine and Rehabilitation, Umeå University, Umeå, Sweden.
Johansson E; Department of Community Medicine and Rehabilitation, Umeå University, Umeå, Sweden.
Jonsson F; Department of Epidemiology and Global Health, Umeå University, Umeå, Sweden.
Hörnsten Å; Department of Nursing, Umeå Univesity, Umeå, Sweden.
Lundgren AS; Departmentof Culture and Media Studies, Umeå University, Umeå, Sweden.
Nilsson I; Department of Community Medicine and Rehabilitation, Umeå University, Umeå, Sweden.
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Źródło:
Scandinavian journal of primary health care [Scand J Prim Health Care] 2023 Sep; Vol. 41 (3), pp. 326-342. Date of Electronic Publication: 2023 Jul 24.
Typ publikacji:
Journal Article; Systematic Review
MeSH Terms:
Social Interaction*
Health Status*
Psychological Well-Being*
Aged ; Humans ; Loneliness
Czasopismo naukowe
Tytuł:
Role of STIM1 in the Regulation of Cardiac Energy Substrate Preference.
Autorzy:
Liu P; Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing 100875, China.
Yang Z; Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing 100875, China.
Wang Y; Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing 100875, China.; Key Laboratory of Cell Proliferation and Regulation Biology, Ministry of Education, College of Life Sciences, Beijing Normal University, Beijing 100875, China.
Sun A; Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing 100875, China.; Key Laboratory of Cell Proliferation and Regulation Biology, Ministry of Education, College of Life Sciences, Beijing Normal University, Beijing 100875, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Aug 25; Vol. 24 (17). Date of Electronic Publication: 2023 Aug 25.
Typ publikacji:
Journal Article; Review
MeSH Terms:
Diabetic Cardiomyopathies*
Heart Diseases*
Stromal Interaction Molecule 1*
Humans ; Cardiomegaly ; Glucose ; Myocytes, Cardiac ; Neoplasm Proteins
Czasopismo naukowe
Tytuł:
Structural basis of γ chain family receptor sharing at the membrane level.
Autorzy:
Cai T; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.
Lenoir Capello R; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.
Pi X; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.; Program in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA 02115, USA.
Wu H; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.; Program in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA 02115, USA.
Chou JJ; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.
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Źródło:
Science (New York, N.Y.) [Science] 2023 Aug 04; Vol. 381 (6657), pp. 569-576. Date of Electronic Publication: 2023 Aug 03.
Typ publikacji:
Journal Article
MeSH Terms:
Interleukin Receptor Common gamma Subunit*/chemistry
Interleukin Receptor Common gamma Subunit*/genetics
Protein Interaction Domains and Motifs*
Interleukin-7 Receptor alpha Subunit*/chemistry
Interleukin-7 Receptor alpha Subunit*/genetics
Protein Binding ; Signal Transduction ; Nuclear Magnetic Resonance, Biomolecular
Czasopismo naukowe
Tytuł:
Physical activity and social interaction assessments in schoolyard settings using the System for Observing Outdoor Play Environments in Neighborhood Schools (SOOPEN).
Autorzy:
Hazlehurst MF; Department of Environmental and Occupational Health Sciences, University of Washington School of Public Health, Seattle, WA, USA.
Wolf KL; College of the Environment, University of Washington, Seattle, WA, USA.
Simmons C; The Trust for Public Land, Washington DC, USA.
Nieto C; Seattle Children's Research Institute, Seattle, WA, USA.
Steiner MK; Seattle Children's Research Institute, Seattle, WA, USA.
Garrett KA; Seattle Children's Research Institute, Seattle, WA, USA.
Faino AV; Seattle Children's Research Institute, Seattle, WA, USA.
Ubalde López M; Barcelona Institute for Global Health-ISGlobal, Barcelona, Spain.; Center for Biomedical Research Network in Epidemiology and Public Health (CIBERESP), Madrid, Spain.; University Pompeu Fabra, Barcelona, Spain.
López-Toribio M; Department of Preventive Medicine and Epidemiology, Hospital Clínic of Barcelona, Barcelona, Spain.
Tandon PS; Seattle Children's Research Institute, Seattle, WA, USA. .; Department of Pediatrics, University of Washington, Seattle, WA, USA. .
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Źródło:
The international journal of behavioral nutrition and physical activity [Int J Behav Nutr Phys Act] 2023 Aug 01; Vol. 20 (1), pp. 94. Date of Electronic Publication: 2023 Aug 01.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural
MeSH Terms:
Social Interaction*
Exercise*/psychology
Child ; Adult ; Humans ; Cross-Sectional Studies ; Reproducibility of Results ; Schools
Czasopismo naukowe
Tytuł:
A novel essential protein identification method based on PPI networks and gene expression data.
Autorzy:
Zhong J; School of Information Science and Engineering, Hunan Normal University, Changsha, 410081, China.; Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Hunan Provincial Key Laboratory of Intelligent Computing and Language Information Processing, Changsha, 410083, China.
Tang C; School of Information Science and Engineering, Hunan Normal University, Changsha, 410081, China.
Peng W; College of Information Engineering and Automation, Kunming University of Science and Technology, Kunming, 650500, Yunnan, China.
Xie M; School of Information Science and Engineering, Hunan Normal University, Changsha, 410081, China.
Sun Y; School of Information Science and Engineering, Hunan Normal University, Changsha, 410081, China.
Tang Q; College of Engineering and Design, Hunan Normal University, Changsha, 410081, China.
Xiao Q; School of Information Science and Engineering, Hunan Normal University, Changsha, 410081, China. .
Yang J; School of Information Science and Engineering, Hunan Normal University, Changsha, 410081, China. jiahong_.
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Źródło:
BMC bioinformatics [BMC Bioinformatics] 2021 May 13; Vol. 22 (1), pp. 248. Date of Electronic Publication: 2021 May 13.
Typ publikacji:
Journal Article
MeSH Terms:
Protein Interaction Maps*
Saccharomyces cerevisiae Proteins*/metabolism
Algorithms ; Computational Biology ; Protein Interaction Mapping ; ROC Curve ; Transcriptome
Czasopismo naukowe
Tytuł:
AMEND: active module identification using experimental data and network diffusion.
Autorzy:
Boyd SS; Department of Biostatistics and Data Science, University of Kansas Medical Center, 3901 Rainbow Blvd., Kansas City, KS, 66103, USA.; University of Kansas Cancer Center, Kansas City, KS, USA.
Slawson C; Department of Biochemistry, University of Kansas Medical Center, 3901 Rainbow Blvd., Kansas City, KS, 66103, USA.; University of Kansas Cancer Center, Kansas City, KS, USA.; University of Kansas Alzheimer's Disease Research Center, Fairway, KS, USA.
Thompson JA; Department of Biostatistics and Data Science, University of Kansas Medical Center, 3901 Rainbow Blvd., Kansas City, KS, 66103, USA. .; University of Kansas Cancer Center, Kansas City, KS, USA. .
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Źródło:
BMC bioinformatics [BMC Bioinformatics] 2023 Jul 06; Vol. 24 (1), pp. 277. Date of Electronic Publication: 2023 Jul 06.
Typ publikacji:
Journal Article
MeSH Terms:
Protein Interaction Mapping*/methods
Protein Interaction Maps*
Algorithms ; Gene Expression Profiling/methods ; Transcriptome ; Gene Regulatory Networks
Czasopismo naukowe
Tytuł:
A Varying Coefficient Model to Jointly Test Genetic and Gene-Environment Interaction Effects.
Autorzy:
Zhou Z; Department of Biostatistics and Epidemiology, University of North Texas Health Science Center, Fort Worth, TX, USA. .
Ku HC; Department of Mathematical Sciences, DePaul University, Chicago, IL, USA.
Manning SE; Department of Pharmacotherapy, University of North Texas Health Science Center, Fort Worth, TX, USA.
Zhang M; Department of Statistical Science, Southern Methodist University, Dallas, TX, USA.
Xing C; McDermott Center for Human Growth and Development and Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX, USA. .
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Źródło:
Behavior genetics [Behav Genet] 2023 Jul; Vol. 53 (4), pp. 374-382. Date of Electronic Publication: 2023 Jan 09.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:
Gene-Environment Interaction*
Genome-Wide Association Study*
Humans ; Models, Genetic ; Phenotype ; Likelihood Functions
Czasopismo naukowe
Tytuł:
Constitutive G protein coupling profiles of understudied orphan GPCRs.
Autorzy:
Lu S; Department of Pharmacology and Toxicology, Medical College of Georgia, Augusta University, Augusta, Georgia, United States of America.
Jang W; Department of Pharmacology and Toxicology, Medical College of Georgia, Augusta University, Augusta, Georgia, United States of America.
Inoue A; Graduate School of Pharmaceutical Sciences, Tohoku University, Sendai, Japan.
Lambert NA; Department of Pharmacology and Toxicology, Medical College of Georgia, Augusta University, Augusta, Georgia, United States of America.
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Źródło:
PloS one [PLoS One] 2021 Apr 22; Vol. 16 (4), pp. e0247743. Date of Electronic Publication: 2021 Apr 22 (Print Publication: 2021).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Protein Interaction Maps*
Receptors, G-Protein-Coupled/*metabolism
Arrestin/metabolism ; GTP-Binding Proteins/metabolism ; HEK293 Cells ; Humans ; Luminescent Measurements ; Protein Interaction Mapping
Czasopismo naukowe
Tytuł:
Identification of novel inhibitors of Keap1/Nrf2 by a promising method combining protein-protein interaction-oriented library and machine learning.
Autorzy:
Shimizu Y; Division of Physics for Life Functions, Faculty of Pharmacy, Keio University, 1-5-30 Shibakoen, Minato-ku, Tokyo, 105-8512, Japan.
Yonezawa T; Division of Physics for Life Functions, Faculty of Pharmacy, Keio University, 1-5-30 Shibakoen, Minato-ku, Tokyo, 105-8512, Japan.; Lifematics Inc., Sanshin-Hatchobori Bldg. 5F, 2-25-10 Chuo-ku, Hatchobori, Tokyo, 104-0032, Japan.
Sakamoto J; Axcelead Drug Discovery Partners, Inc., 26-1, Muraoka-Higashi 2-chome, Fujisawa, Kanagawa, 251-0012, Japan.
Furuya T; Drug Discovery Department, Research and Development Division, PharmaDesign, Inc., Hatchobori 2-19-8, Chuo-ku, Tokyo, 104-0032, Japan.
Osawa M; Division of Physics for Life Functions, Faculty of Pharmacy, Keio University, 1-5-30 Shibakoen, Minato-ku, Tokyo, 105-8512, Japan.
Ikeda K; Division of Physics for Life Functions, Faculty of Pharmacy, Keio University, 1-5-30 Shibakoen, Minato-ku, Tokyo, 105-8512, Japan. .
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Źródło:
Scientific reports [Sci Rep] 2021 Apr 01; Vol. 11 (1), pp. 7420. Date of Electronic Publication: 2021 Apr 01.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Machine Learning*
Protein Interaction Mapping*/methods
Drug Discovery/*methods
Kelch-Like ECH-Associated Protein 1/*chemistry
NF-E2-Related Factor 2/*chemistry
Binding Sites ; Humans ; Kelch-Like ECH-Associated Protein 1/antagonists & inhibitors ; Ligands ; Molecular Conformation ; Molecular Docking Simulation ; Molecular Dynamics Simulation ; Molecular Structure ; NF-E2-Related Factor 2/antagonists & inhibitors ; Protein Binding ; Protein Interaction Maps ; Small Molecule Libraries ; Structure-Activity Relationship
Czasopismo naukowe
Tytuł:
Generating Potential Protein-Protein Interaction Inhibitor Molecules Based on Physicochemical Properties.
Autorzy:
Ohue M; Department of Computer Science, School of Computing, Tokyo Institute of Technology, Kanagawa 226-8501, Japan.
Kojima Y; Department of Computer Science, School of Computing, Tokyo Institute of Technology, Kanagawa 226-8501, Japan.
Kosugi T; Department of Computer Science, School of Computing, Tokyo Institute of Technology, Kanagawa 226-8501, Japan.
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Źródło:
Molecules (Basel, Switzerland) [Molecules] 2023 Jul 26; Vol. 28 (15). Date of Electronic Publication: 2023 Jul 26.
Typ publikacji:
Journal Article
MeSH Terms:
Drug Discovery*/methods
Protein Interaction Mapping*
Czasopismo naukowe
Tytuł:
Investigation of dynamic solution interactions between NET-1 and UNC-5B by multi-wavelength analytical ultracentrifugation.
Autorzy:
Gabir H; Department of Chemistry, University of Manitoba, Winnipeg, MB, Canada.
Gupta M; Genvira Biosciences, Ottawa, ON, Canada.
Meier M; Department of Chemistry, University of Manitoba, Winnipeg, MB, Canada.
Heide F; Department of Chemistry, University of Manitoba, Winnipeg, MB, Canada.
Koch M; Medical Faculty, Institute for Dental Research and Oral Musculoskeletal Biology, University of Cologne, Cologne, Germany.
Stetefeld J; Department of Chemistry, University of Manitoba, Winnipeg, MB, Canada.
Demeler B; Department of Chemistry and Biochemistry, University of Lethbridge, Lethbridge, AB, Canada. .; Department of Chemistry and Biochemistry, University of Montana, Missoula, MT, USA. .
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Źródło:
European biophysics journal : EBJ [Eur Biophys J] 2023 Jul; Vol. 52 (4-5), pp. 473-481. Date of Electronic Publication: 2023 Mar 20.
Typ publikacji:
Journal Article
MeSH Terms:
Netrin-1*/chemistry
Netrin Receptors*
Protein Interaction Domains and Motifs*
Animals ; Ultracentrifugation ; Humans
Czasopismo naukowe
Tytuł:
Bias in Gene-by-Environment Interaction Effects with Sum Scores; An Application to Well-being Phenotypes.
Autorzy:
Pelt DHM; Department of Biological Psychology, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands. .; Amsterdam Public Health Research Institute, Amsterdam University Medical Center, Amsterdam, The Netherlands. .
Schwabe I; Department of Methodology and Statistics, Tilburg University, Tilburg, The Netherlands.
Bartels M; Department of Biological Psychology, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands.; Amsterdam Public Health Research Institute, Amsterdam University Medical Center, Amsterdam, The Netherlands.
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Źródło:
Behavior genetics [Behav Genet] 2023 Jul; Vol. 53 (4), pp. 359-373. Date of Electronic Publication: 2023 Mar 01.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Gene-Environment Interaction*
Multifactorial Inheritance*
Phenotype ; Netherlands
Czasopismo naukowe
Tytuł:
Design Path for a Social Robot for Emotional Communication for Children with Autism Spectrum Disorder (ASD).
Autorzy:
Cano S; School of Computer Engineering, Pontificia Universidad Católica de Valparaíso, Valparaíso 2340000, Chile.
Díaz-Arancibia J; Departamento de Ciencias de la Computación e Informática, Universidad de la Frontera, Temuco 4811230, Chile.
Arango-López J; Departamento de Sistemas e Informática, Universidad de Caldas, Manizales 170004, Colombia.
Libreros JE; Facultad de Psicología, Universidad Cooperativa de Colombia, Cali 760035, Colombia.
García M; School of Computer Engineering, Pontificia Universidad Católica de Valparaíso, Valparaíso 2340000, Chile.
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Źródło:
Sensors (Basel, Switzerland) [Sensors (Basel)] 2023 Jun 02; Vol. 23 (11). Date of Electronic Publication: 2023 Jun 02.
Typ publikacji:
Journal Article
MeSH Terms:
Autism Spectrum Disorder*/psychology
Robotics*/methods
Social Interaction*
Child ; Humans ; Communication ; Emotions
Czasopismo naukowe
Tytuł:
Identifying driver pathways based on a parameter-free model and a partheno-genetic algorithm.
Autorzy:
Wu J; Key Lab of Education Blockchain and Intelligent Technology, Ministry of Education, Guangxi Normal University, Guilin, China. .; Guangxi Key Lab of Multi-source Information Mining and Security, Guangxi Normal University, Guilin, China. .; College of Computer Science and Engineering, Guangxi Normal University, Guilin, China. .
Nie Q; Key Lab of Education Blockchain and Intelligent Technology, Ministry of Education, Guangxi Normal University, Guilin, China.; Guangxi Key Lab of Multi-source Information Mining and Security, Guangxi Normal University, Guilin, China.; College of Computer Science and Engineering, Guangxi Normal University, Guilin, China.
Li G; Key Lab of Education Blockchain and Intelligent Technology, Ministry of Education, Guangxi Normal University, Guilin, China.; Guangxi Key Lab of Multi-source Information Mining and Security, Guangxi Normal University, Guilin, China.; College of Computer Science and Engineering, Guangxi Normal University, Guilin, China.
Zhu K; Guangxi Key Lab of Multi-source Information Mining and Security, Guangxi Normal University, Guilin, China.; College of Computer Science and Engineering, Guangxi Normal University, Guilin, China.
Pokaż więcej
Źródło:
BMC bioinformatics [BMC Bioinformatics] 2023 May 23; Vol. 24 (1), pp. 211. Date of Electronic Publication: 2023 May 23.
Typ publikacji:
Journal Article
MeSH Terms:
Protein Interaction Maps*
Algorithms*
Cluster Analysis
Czasopismo naukowe

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