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Tytuł :
Virulence and resistance genes profiles and clonal relationships of non-typhoidal food-borne Salmonella strains isolated in Tunisia by whole genome sequencing.
Autorzy :
Ben Hassena A; Department of Life Sciences, Research Laboratory of Environmental Toxicology-Microbiology and Health (LR17ES06), Faculty of Sciences, University of Sfax, Sfax, Tunisia.
Haendiges J; Division of Microbiology, Office of Regulatory Science, Center for Food Safety and Applied Nutrition, Food and Drug Administration, College Park, MD, USA.
Zormati S; Regional Center of Veterinary research of Sfax, Tunisia.
Guermazi S; Department of Life Sciences, Research Laboratory of Environmental Toxicology-Microbiology and Health (LR17ES06), Faculty of Sciences, University of Sfax, Sfax, Tunisia.
Gdoura R; Department of Life Sciences, Research Laboratory of Environmental Toxicology-Microbiology and Health (LR17ES06), Faculty of Sciences, University of Sfax, Sfax, Tunisia.
Gonzalez-Escalona N; Division of Microbiology, Office of Regulatory Science, Center for Food Safety and Applied Nutrition, Food and Drug Administration, College Park, MD, USA.
Siala M; Department of Life Sciences, Research Laboratory of Environmental Toxicology-Microbiology and Health (LR17ES06), Faculty of Sciences, University of Sfax, Sfax, Tunisia; Department of Biology, Preparatory Institute for Engineering Studies of Sfax, University of Sfax, Tunisia. Electronic address: .
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Źródło :
International journal of food microbiology [Int J Food Microbiol] 2021 Jan 16; Vol. 337, pp. 108941. Date of Electronic Publication: 2020 Oct 28.
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeny*
Salmonella*/classification
Salmonella*/genetics
Salmonella*/pathogenicity
Genome, Bacterial/*genetics
Virulence/*genetics
Animals ; Drug Resistance, Bacterial/genetics ; Multilocus Sequence Typing/methods ; Serogroup ; Serotyping ; Tunisia ; Whole Genome Sequencing
Czasopismo naukowe
Tytuł :
Mitochondrial DNAs provide insight into trypanosome phylogeny and molecular evolution.
Autorzy :
Kay C; School of Biological Sciences, University of Bristol, Bristol, UK. .
Williams TA; School of Biological Sciences, University of Bristol, Bristol, UK.
Gibson W; School of Biological Sciences, University of Bristol, Bristol, UK.
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Źródło :
BMC evolutionary biology [BMC Evol Biol] 2020 Dec 09; Vol. 20 (1), pp. 161. Date of Electronic Publication: 2020 Dec 09.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Evolution, Molecular*
Phylogeny*
Trypanosoma*/classification
Trypanosoma*/genetics
Africa ; DNA, Mitochondrial/genetics
Czasopismo naukowe
Tytuł :
Ultraconserved element bait set for trypanosomatida target enrichment and phylogenetics.
Autorzy :
Kieran TJ; Department of Environmental Health Science, College of Public Health, University of Georgia, 206 Environmental Health Science Building, Athens, GA, 30602, USA. Electronic address: .
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Źródło :
Experimental parasitology [Exp Parasitol] 2020 Dec; Vol. 219, pp. 108015. Date of Electronic Publication: 2020 Oct 05.
Typ publikacji :
Journal Article
MeSH Terms :
Genetic Markers*
Phylogeny*
Trypanosomatina/*classification
Trypanosomatina/*genetics
Genome, Protozoan
Czasopismo naukowe
Tytuł :
Most Cephalaspidea have a shell, but transcriptomes can provide them with a backbone (Gastropoda: Heterobranchia).
Autorzy :
Knutson VL; Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford St, Cambridge, MA 02138, USA. Electronic address: .
Brenzinger B; SNSB - Zoologische Staatssammlung München, Münchhausenstr. 21, D-81247 Munich, Germany.
Schrödl M; SNSB - Zoologische Staatssammlung München, Münchhausenstr. 21, D-81247 Munich, Germany; Department Biology II, Ludwig-Maximilians-Universität, 82152 Planegg-Martinsried, Munich, Germany; GeoBio-Center LMU, München 80333, Germany.
Wilson NG; Collections & Research, Western Australian Museum, 49 Kew St, Welshpool 6106, WA, Australia; University of Western Australia, 35 Stirling Highway, Crawley 6009, WA, Australia.
Giribet G; Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford St, Cambridge, MA 02138, USA.
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2020 Dec; Vol. 153, pp. 106943. Date of Electronic Publication: 2020 Aug 27.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Phylogeny*
Transcriptome*
Gastropoda/*classification
Animal Shells ; Animals ; Bayes Theorem ; Gastropoda/anatomy & histology ; Gastropoda/genetics ; Genome/genetics
Czasopismo naukowe
Tytuł :
Genome-based reclassification of Azospirillum brasilense Sp245 as the type strain of Azospirillum baldaniorum sp. nov.
Autorzy :
Dos Santos Ferreira N; Programa de Pós-Graduação em Agronomia-Ciência do Solo, Universidade Federal Rural do Rio de Janeiro, BR 465 Km 7, 23890-000, Seropédica, Rio de Janeiro, Brazil.
Hayashi Sant' Anna F; Departamento de Genética, Instituto de Biociências, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Massena Reis V; Embrapa Agrobiologia, BR 465 Km 7, 23891-000, Seropédica, Rio de Janeiro, Brazil.
Ambrosini A; Departamento de Genética, Instituto de Biociências, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Gazolla Volpiano C; Departamento de Genética, Instituto de Biociências, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Rothballer M; Institute of Network Biology, Helmholtz Zentrum Muenchen, Ingolstaedter Landstr. 185764 Neuherberg, Germany.
Schwab S; Embrapa Agrobiologia, BR 465 Km 7, 23891-000, Seropédica, Rio de Janeiro, Brazil.
Baura VA; Departamento de Bioquímica e Biologia Molecular, Núcleo de Fixação de Nitrogênio, UFPR, Curitiba, Brazil.
Balsanelli E; Departamento de Bioquímica e Biologia Molecular, Núcleo de Fixação de Nitrogênio, UFPR, Curitiba, Brazil.
Pedrosa FO; Departamento de Bioquímica e Biologia Molecular, Núcleo de Fixação de Nitrogênio, UFPR, Curitiba, Brazil.
Pereira Passaglia LM; Departamento de Genética, Instituto de Biociências, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Maltempi de Souza E; Departamento de Bioquímica e Biologia Molecular, Núcleo de Fixação de Nitrogênio, UFPR, Curitiba, Brazil.
Hartmann A; Faculty of Biology, Microbe-Host-Interactions, Ludwig-Maximilian-University Muenchen, 82152 Planegg/Martinsried, Germany.
Cassan F; Laboratorio de Fisiología Vegetal y de la Interacción Planta-microorganismo. Instituto de Investigaciones Agrobiotecnológicas (INIAB-CONICET), FCEFQyN. Universidad Nacional de Río Cuarto., Ruta 36, Km 601, Río Cuarto, Córdoba, Argentina.
Zilli JE; Embrapa Agrobiologia, BR 465 Km 7, 23891-000, Seropédica, Rio de Janeiro, Brazil.
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Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2020 Dec; Vol. 70 (12), pp. 6203-6212.
Typ publikacji :
Journal Article
MeSH Terms :
Genome, Bacterial*
Phylogeny*
Azospirillum/*classification
Azospirillum brasilense/*classification
Bacterial Typing Techniques ; Base Composition ; Brazil ; DNA, Bacterial/genetics ; Flagella/chemistry ; Nucleic Acid Hybridization ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Sequence analysis of 16S rDNA, gyr B and alk B genes of plant-associated Rhodococcus species from Tunisia.
Autorzy :
Dhaouadi S; Laboratory of Bio Aggressors and Integrated Pest Management, Department of Plant Health and Environment, National Institute of Agronomy, Tunis, University of Carthage, Tunis, Tunisia.
Mougou AH; Laboratory of Bio Aggressors and Integrated Pest Management, Department of Plant Health and Environment, National Institute of Agronomy, Tunis, University of Carthage, Tunis, Tunisia.
Wu CJ; Chiayi Agricultural Experiment Station, Taiwan Agricultural Research Institute, Taiwan, ROC.
Gleason ML; Department of Plant Pathology and Microbiology, Iowa State University, Ames, Iowa 50011, USA.
Rhouma A; Partnership for Research and Innovation in the Mediterranean Area (PRIMA), Barcelona, Spain.
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Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2020 Dec; Vol. 70 (12), pp. 6491-6507.
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeny*
Plants/*microbiology
Rhodococcus/*classification
Bacterial Typing Techniques ; Base Composition ; DNA, Bacterial/genetics ; Fatty Acids/chemistry ; Genes, Bacterial ; Pigmentation ; RNA, Ribosomal, 16S/genetics ; Rhodococcus/isolation & purification ; Sequence Analysis, DNA ; Tunisia
Czasopismo naukowe
Tytuł :
Chitinophaga extrema sp. nov., isolated from subsurface soil and leaf litter in a tropical peat swamp forest.
Autorzy :
Goh CBS; Tropical Medicine and Biology Multidisciplinary Platform, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, 47500 Subang Jaya, Selangor, Malaysia.; School of Science, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, 47500 Subang Jaya, Selangor, Malaysia.
Wong LW; School of Science, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, 47500 Subang Jaya, Selangor, Malaysia.
Parimannan S; Deakin Genomics Centre, School of Life and Environmental Sciences, Faculty of Science, Engineering and Built Environment, Deakin University, Waurn Ponds Campus, Victoria 3216, Australia.; Centre of Excellence for Omics-Driven Computational Biodiscovery (COMBio), Faculty of Applied Sciences, AIMST University, 08100 Bedong, Kedah, Malaysia.
Rajandas H; Deakin Genomics Centre, School of Life and Environmental Sciences, Faculty of Science, Engineering and Built Environment, Deakin University, Waurn Ponds Campus, Victoria 3216, Australia.; Centre of Excellence for Omics-Driven Computational Biodiscovery (COMBio), Faculty of Applied Sciences, AIMST University, 08100 Bedong, Kedah, Malaysia.
Loke S; Deakin Genomics Centre, School of Life and Environmental Sciences, Faculty of Science, Engineering and Built Environment, Deakin University, Waurn Ponds Campus, Victoria 3216, Australia.
Croft L; Deakin Genomics Centre, School of Life and Environmental Sciences, Faculty of Science, Engineering and Built Environment, Deakin University, Waurn Ponds Campus, Victoria 3216, Australia.
Yule CM; School of Science and Engineering, University of the Sunshine Coast, Queensland 4556, Australia.
Pasbakhsh P; School of Engineering, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, 47500 Subang Jaya, Selangor, Malaysia.
Lee SM; Tropical Medicine and Biology Multidisciplinary Platform, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, 47500 Subang Jaya, Selangor, Malaysia.; School of Science, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, 47500 Subang Jaya, Selangor, Malaysia.
Tan JBL; Tropical Medicine and Biology Multidisciplinary Platform, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, 47500 Subang Jaya, Selangor, Malaysia.; School of Science, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, 47500 Subang Jaya, Selangor, Malaysia.
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Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2020 Dec; Vol. 70 (12), pp. 6355-6363.
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeny*
Soil Microbiology*
Wetlands*
Gammaproteobacteria/*classification
Bacterial Typing Techniques ; Base Composition ; DNA, Bacterial/genetics ; Fatty Acids/chemistry ; Forests ; Gammaproteobacteria/isolation & purification ; Malaysia ; Nucleic Acid Hybridization ; Plant Leaves ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA ; Vitamin K 2/analogs & derivatives ; Vitamin K 2/chemistry
Czasopismo naukowe
Tytuł :
Four myriapod relatives - but who are sisters? No end to debates on relationships among the four major myriapod subgroups.
Autorzy :
Szucsich NU; Department of Evolutionary Biology, University of Vienna, A-1090, Vienna, Austria. .; Central Research Laboratories, Natural History Museum of Vienna, A-1010, Vienna, Austria. .
Bartel D; Department of Evolutionary Biology, University of Vienna, A-1090, Vienna, Austria.
Blanke A; Institute for Zoology, Biocenter, University of Cologne, D-50674, Cologne, Germany.; Institute of Evolutionary Biology and Animal Ecology, University of Bonn, D-53121, Bonn, Germany.
Böhm A; Department of Evolutionary Biology, University of Vienna, A-1090, Vienna, Austria.
Donath A; Centre for Molecular Biodiversity Research, Zoological Research Museum Alexander Koenig, D-53113, Bonn, Germany.
Fukui M; Department of Biology, Graduate School of Science and Engineering, Ehime University, Bunkyo-cho, Matsuyama, Ehime, 790-8577, Japan.
Grove S; Invertebrate Zoology, Collections and Research Facility, Tasmanian Museum and Art Gallery, Rosny, Tasmania, 7018, Australia.
Liu S; Department of Entomology, China Agricultural University, Beijing, 100193, People's Republic of China.
Macek O; Department of Evolutionary Biology, University of Vienna, A-1090, Vienna, Austria.; Central Research Laboratories, Natural History Museum of Vienna, A-1010, Vienna, Austria.
Machida R; Sugadaira Research Station, Mountain Science Center, University of Tsukuba, Sugadaira, Ueda, Nagano, 386-2204, Japan.
Misof B; Zoological Research Museum Alexander Koenig, D-53113, Bonn, Germany.
Nakagaki Y; Sugadaira Research Station, Mountain Science Center, University of Tsukuba, Sugadaira, Ueda, Nagano, 386-2204, Japan.
Podsiadlowski L; Centre for Molecular Biodiversity Research, Zoological Research Museum Alexander Koenig, D-53113, Bonn, Germany.
Sekiya K; Sugadaira Research Station, Mountain Science Center, University of Tsukuba, Sugadaira, Ueda, Nagano, 386-2204, Japan.
Tomizuka S; Matsunoyamamatsuguchi, Tokamachi, Niigata, 942-1411, Japan.
Von Reumont BM; LOEWE Centre for Translational Biodiversity Genomics (LOEWE TBG), Senckenberganlage 25, 60325, Frankfurt, Germany.; Animal Venomics, Institute for Insect Biotechnology, University of Giessen, Heinrich Buff Ring 26-32, D-35394, Giessen, Germany.
Waterhouse RM; Department of Ecology and Evolution, University of Lausanne and Swiss Institute of Bioinformatics, 1015, Lausanne, Switzerland.
Walzl M; Department of Evolutionary Biology, University of Vienna, A-1090, Vienna, Austria.
Meng G; Centre of Taxonomy and Evolutionary Research, Zoological Research Museum Alexander Koenig, D-53113, Bonn, Germany.
Zhou X; Department of Entomology, China Agricultural University, Beijing, 100193, People's Republic of China.
Pass G; Department of Evolutionary Biology, University of Vienna, A-1090, Vienna, Austria.
Meusemann K; Centre for Molecular Biodiversity Research, Zoological Research Museum Alexander Koenig, D-53113, Bonn, Germany. .; Department of Evolutionary Biology and Ecology, Institute of Biology I (Zoology), University of Freiburg, D-79104, Freiburg, Germany. .; Australian National Insect Collection, National Research Collections Australia, CSIRO, ACT, Canberra, 2601, Australia. .
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Źródło :
BMC evolutionary biology [BMC Evol Biol] 2020 Nov 04; Vol. 20 (1), pp. 144. Date of Electronic Publication: 2020 Nov 04.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Arthropods*/classification
Arthropods*/genetics
Phylogeny*
Animals ; Transcriptome
Czasopismo naukowe
Tytuł :
Phylogenomics of the aquatic plant genus Ottelia (Hydrocharitaceae): Implications for historical biogeography.
Autorzy :
Li ZZ; CAS Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China; Center of Conservation Biology, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan 430074, China; University of Chinese Academy of Sciences, Beijing 100049, China.
Lehtonen S; Herbarium, Biodiversity Unit, University of Turku, Turku 20014, Finland.
Martins K; Departamento de Biologia, Universidade Federal de São Carlos, Sorocaba 18052-780, Brazil.
Gichira AW; CAS Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China; University of Chinese Academy of Sciences, Beijing 100049, China; Sino-Africa Joint Research Center, Chinese Academy of Sciences, Wuhan 430074, China.
Wu S; Guangxi Association for Science and Technology, Nanning 530022, China.
Li W; CAS Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China.
Hu GW; CAS Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China; Center of Conservation Biology, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan 430074, China; Sino-Africa Joint Research Center, Chinese Academy of Sciences, Wuhan 430074, China.
Liu Y; Guangxi Institute of Botany, Chinese Academy of Sciences, Guilin 541006, China.
Zou CY; Guangxi Institute of Botany, Chinese Academy of Sciences, Guilin 541006, China.
Wang QF; CAS Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China; Center of Conservation Biology, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan 430074, China; Sino-Africa Joint Research Center, Chinese Academy of Sciences, Wuhan 430074, China.
Chen JM; CAS Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China; Center of Conservation Biology, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan 430074, China. Electronic address: .
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2020 Nov; Vol. 152, pp. 106939. Date of Electronic Publication: 2020 Aug 11.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeny*
Hydrocharitaceae/*classification
Hydrocharitaceae/*genetics
Biological Evolution ; Phylogeography ; Plastids/genetics
Czasopismo naukowe
Tytuł :
The novel coronavirus SARS-CoV-2: From a zoonotic infection to coronavirus disease 2019.
Autorzy :
Dos Santos Bezerra R; Pós-Graduation Program in Clinical Oncology, Stem Cells and Cell Therapy, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.; Laboratory of Molecular Biology, Blood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.
Valença IN; Pós-Graduation Program in Clinical Oncology, Stem Cells and Cell Therapy, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.; Laboratory of Molecular Biology, Blood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.
de Cassia Ruy P; Center for Medical Genomics, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.
Ximenez JPB; Laboratory of Molecular Biology, Blood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.
da Silva Junior WA; Department of Genetics, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.
Covas DT; Laboratory of Molecular Biology, Blood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.
Kashima S; Laboratory of Molecular Biology, Blood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.
Slavov SN; Laboratory of Molecular Biology, Blood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.
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Źródło :
Journal of medical virology [J Med Virol] 2020 Nov; Vol. 92 (11), pp. 2607-2615. Date of Electronic Publication: 2020 Jun 16.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Genome, Viral*
Phylogeny*
COVID-19/*transmission
Chiroptera/*virology
SARS-CoV-2/*genetics
Zoonoses/*transmission
Amino Acid Substitution ; Animals ; COVID-19/epidemiology ; Evolution, Molecular ; Humans ; Mutation ; Pangolins/virology ; SARS-CoV-2/classification ; Viral Tropism ; Zoonoses/epidemiology ; Zoonoses/virology
Czasopismo naukowe
Tytuł :
Salifodinibacter halophilus gen. nov., sp. nov., a halophilic gammaproteobacterium in the family Salinisphaeraceae isolated from a salt mine in the Colombian Andes.
Autorzy :
Parada-Pinilla MP; Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Pontificia Universidad Javeriana, POB 56710, Bogotá DC, Colombia.
Díaz-Cárdenas C; Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Pontificia Universidad Javeriana, POB 56710, Bogotá DC, Colombia.
López G; Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Pontificia Universidad Javeriana, POB 56710, Bogotá DC, Colombia.
Díaz-Riaño JI; Vicepresidency of Research and Creation, Universidad de los Andes, Cra 1 No. 18A-12, Bogotá DC, Colombia.
Gonzalez LN; Vicepresidency of Research and Creation, Universidad de los Andes, Cra 1 No. 18A-12, Bogotá DC, Colombia.
Restrepo S; Chemical Engineering Department, Universidad de los Andes, Cra 1 No. 18A-12, Bogotá DC, Colombia.
Trujillo ME; Departamento de Microbiología y Genética, Universidad de Salamanca, Salamanca 37007, Spain.
Baena S; Unidad de Saneamiento y Biotecnología Ambiental (USBA), Departamento de Biología, Pontificia Universidad Javeriana, POB 56710, Bogotá DC, Colombia.
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Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2020 Nov; Vol. 70 (11), pp. 5888-5898.
Typ publikacji :
Journal Article
MeSH Terms :
Mining*
Phylogeny*
Sodium Chloride*
Gammaproteobacteria/*classification
Bacterial Typing Techniques ; Base Composition ; Colombia ; DNA, Bacterial/genetics ; Fatty Acids/chemistry ; Gammaproteobacteria/isolation & purification ; Genome Size ; Geologic Sediments/microbiology ; Quinones/chemistry ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA ; Water Microbiology
Czasopismo naukowe
Tytuł :
Eocarcinus praecursor Withers, 1932 (Malacostraca, Decapoda, Meiura) is a stem group brachyuran.
Autorzy :
Scholtz G; Humboldt-Universität zu Berlin, Institut für Biologie/Vergleichende Zoologie, Philippstr. 13, 10115 Berlin, Germany. Electronic address: .
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Źródło :
Arthropod structure & development [Arthropod Struct Dev] 2020 Nov; Vol. 59, pp. 100991. Date of Electronic Publication: 2020 Sep 03.
Typ publikacji :
Journal Article
MeSH Terms :
Biological Evolution*
Phylogeny*
Brachyura/*classification
Fossils/*anatomy & histology
Animals ; Brachyura/anatomy & histology ; Extremities/anatomy & histology
Czasopismo naukowe
Tytuł :
Phylogeny and biogeography of Sagittaria (Alismataceae) revisited: evidence for cryptic diversity and colonization out of South America.
Autorzy :
Ito Y; Faculty of Pharmaceutical Sciences, Setsunan University, 45-1 Nagaotoge-cho, Hirakata, Osaka, 573-0101, Japan. .
Tanaka N; Tsukuba Botanical Garden, National Museum of Nature and Science, 4-1-1, Amakubo, Tsukuba, Ibaraki, 305-0005, Japan.
Keener BR; University of West Alabama, Livingston, AL, 35470, USA.
Lehtonen S; Biodiversity Unit, University of Turku, 20014, Turku, Finland.
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Źródło :
Journal of plant research [J Plant Res] 2020 Nov; Vol. 133 (6), pp. 827-839. Date of Electronic Publication: 2020 Oct 22.
Typ publikacji :
Journal Article
MeSH Terms :
Biological Evolution*
Phylogeny*
Sagittaria/*classification
Africa ; Asia ; Bayes Theorem ; DNA, Chloroplast/genetics ; DNA, Plant/genetics ; DNA, Ribosomal Spacer/genetics ; Europe ; Far East ; North America ; Sequence Analysis, DNA ; South America
Czasopismo naukowe
Tytuł :
Out of the Hengduan Mountains: Molecular phylogeny and historical biogeography of the Asian water snake genus Trimerodytes (Squamata: Colubridae).
Autorzy :
Guo P; College of Life Sciences and Food Engineering, Yibin University, Yibin 644007, China. Electronic address: .
Zhu F; College of Life Sciences, Guizhou Normal University, Guiyang 550025, China.
Liu Q; College of Life Sciences and Food Engineering, Yibin University, Yibin 644007, China.
Wang P; College of Life Sciences and Food Engineering, Yibin University, Yibin 644007, China.
Che J; State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, China; Southeast Asia Biodiversity Research Institute, Chinese Academy of Sciences, Yezin, Nay Pyi Taw 05282, Myanmar.
Nguyen TQ; Institute of Ecology and Biological Resources, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Road, Hanoi, Viet Nam; Graduate University of Science and Technology, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Road, Hanoi, Viet Nam.
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2020 Nov; Vol. 152, pp. 106927. Date of Electronic Publication: 2020 Aug 06.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeny*
Colubridae/*classification
Colubridae/*genetics
Animals ; Bayes Theorem ; Cell Nucleus/genetics ; China ; Genes, Mitochondrial/genetics
Czasopismo naukowe
Tytuł :
Recent trends on omics and bioinformatics approaches to study SARS-CoV-2: A bibliometric analysis and mini-review.
Autorzy :
Murillo J; Faculty of Engineering, Pontificia Universidad Javeriana-Cali, Cali, Colombia. Electronic address: .
Villegas LM; Faculty of Health, Universidad Del Valle, Cali, Colombia. Electronic address: .
Ulloa-Murillo LM; Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences Prague, Czech Republic. Electronic address: .
Rodríguez AR; Faculty of Health, Universidad Del Valle, Cali, Colombia. Electronic address: .
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Źródło :
Computers in biology and medicine [Comput Biol Med] 2021 Jan; Vol. 128, pp. 104162. Date of Electronic Publication: 2020 Dec 03.
Typ publikacji :
Journal Article; Review
MeSH Terms :
Bibliometrics*
COVID-19*/epidemiology
COVID-19*/genetics
COVID-19*/metabolism
Computational Biology*
Pandemics*
Phylogeny*
SARS-CoV-2*/genetics
SARS-CoV-2*/metabolism
Humans ; Molecular Docking Simulation
Czasopismo naukowe
Tytuł :
Genome-scale reconstructions to assess metabolic phylogeny and organism clustering.
Autorzy :
Schulz C; Department of Biotechnology and Food Science, NTNU - Norwegian University of Science and Technology, Trondheim, Norway.
Almaas E; Department of Biotechnology and Food Science, NTNU - Norwegian University of Science and Technology, Trondheim, Norway.; K.G. Jebsen Center for Genetic Epidemiology Department of Public Health and General Practice, NTNU - Norwegian University of Science and Technology, Trondheim, Norway.
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Źródło :
PloS one [PLoS One] 2020 Dec 29; Vol. 15 (12), pp. e0240953. Date of Electronic Publication: 2020 Dec 29 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeny*
Metabolic Networks and Pathways/*genetics
Animals ; Cluster Analysis ; DNA Fingerprinting ; Databases, Genetic ; Genetic Engineering ; Genome ; Genomics ; Humans ; Penetrance ; Proteins/genetics ; Proteins/metabolism ; Sequence Alignment
Czasopismo naukowe
Tytuł :
Phylogenetic supertree reveals detailed evolution of SARS-CoV-2.
Autorzy :
Li T; Institute of Immunology, School of Basic Medical Sciences, Lanzhou University, Lanzhou, 730000, China.
Liu D; Institute of Pathology, School of Basic Medical Sciences, Lanzhou University, Lanzhou, 730000, China.
Yang Y; Institute of Immunology, School of Basic Medical Sciences, Lanzhou University, Lanzhou, 730000, China.
Guo J; The Second Clinical Medical School, Lanzhou University, Lanzhou, 730000, China.
Feng Y; The Second Clinical Medical School, Lanzhou University, Lanzhou, 730000, China.
Zhang X; The Second Clinical Medical School, Lanzhou University, Lanzhou, 730000, China.
Cheng S; The First Clinical Medical School, Lanzhou University, Lanzhou, 730000, China.
Feng J; Institute of Pathology, School of Basic Medical Sciences, Lanzhou University, Lanzhou, 730000, China. .
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Źródło :
Scientific reports [Sci Rep] 2020 Dec 22; Vol. 10 (1), pp. 22366. Date of Electronic Publication: 2020 Dec 22.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Mutation Rate*
Phylogeny*
COVID-19/*virology
Chiroptera/*virology
SARS-CoV-2/*genetics
Amino Acid Sequence ; Animals ; Genome, Viral ; Middle East Respiratory Syndrome Coronavirus/genetics ; SARS Virus/genetics ; Severe Acute Respiratory Syndrome/virology
Czasopismo naukowe
Tytuł :
Genomic epidemiology reveals multiple introductions and spread of SARS-CoV-2 in the Indian state of Karnataka.
Autorzy :
Pattabiraman C; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Habib F; TruFactor-InMobi Group, Bengaluru, India.
P K H; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Rasheed R; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Prasad P; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Reddy V; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Dinesh P; Directorate of Health and Family Welfare Services, Government of Karnataka, Bengaluru, India.
Damodar T; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Hosallimath K; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
George AK; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Kiran Reddy NV; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
John B; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Pattanaik A; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Kumar N; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Mani RS; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Venkataswamy MM; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Shahul Hameed SK; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Kumar B G P; Directorate of Health and Family Welfare Services, Government of Karnataka, Bengaluru, India.
Desai A; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
Vasanthapuram R; Department of Neurovirology, National Institute of Mental Health and Neurosciences, Bengaluru, India.
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Źródło :
PloS one [PLoS One] 2020 Dec 17; Vol. 15 (12), pp. e0243412. Date of Electronic Publication: 2020 Dec 17 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
COVID-19*/epidemiology
COVID-19*/genetics
COVID-19*/transmission
Disease Outbreaks*
Genome, Viral*
Phylogeny*
Respiratory Distress Syndrome*/epidemiology
Respiratory Distress Syndrome*/genetics
Respiratory Distress Syndrome*/virology
SARS-CoV-2/*genetics
Contact Tracing ; Female ; Humans ; India/epidemiology ; Male ; Travel
Czasopismo naukowe
Tytuł :
A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity.
Autorzy :
Wylensek D; Functional Microbiome Research Group, RWTH University Hospital, Aachen, Germany.
Hitch TCA; Functional Microbiome Research Group, RWTH University Hospital, Aachen, Germany.
Riedel T; Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.; German Center for Infection Research (DZIF), Partner site Hannover-Braunschweig, Braunschweig, Germany.
Afrizal A; Functional Microbiome Research Group, RWTH University Hospital, Aachen, Germany.
Kumar N; Functional Microbiome Research Group, RWTH University Hospital, Aachen, Germany.; ZIEL - Institute for Food & Health, Technical University of Munich, Freising, Germany.
Wortmann E; Functional Microbiome Research Group, RWTH University Hospital, Aachen, Germany.
Liu T; Chair of Technical Biochemistry, Technical University of Dresden, Dresden, Germany.
Devendran S; Microbiome Metabolic Engineering Theme, Carl R. Woese Institute for Genomic Biology, Urbana, IL, USA.; Department of Animal Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Lesker TR; Department of Microbial Immune Regulation, Helmholtz Centre for Infection Research, Braunschweig, Germany.
Hernández SB; Laboratory for Molecular Infection Medicine Sweden (MIMS), Department of Molecular Biology, Umeå University, Umeå, Sweden.
Heine V; Laboratory for Biomaterials, Institute for Biotechnology and Helmholtz-Institute for Biomedical Engineering, RWTH Aachen University, Aachen, Germany.
Buhl EM; Electron Microscopy Facility, Institute of Pathology, RWTH University Hospital, Aachen, Germany.
M D'Agostino P; Chair of Technical Biochemistry, Technical University of Dresden, Dresden, Germany.
Cumbo F; Department CIBIO, University of Trento, Trento, Italy.
Fischöder T; Laboratory for Biomaterials, Institute for Biotechnology and Helmholtz-Institute for Biomedical Engineering, RWTH Aachen University, Aachen, Germany.
Wyschkon M; Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.; German Center for Infection Research (DZIF), Partner site Hannover-Braunschweig, Braunschweig, Germany.
Looft T; National Animal Disease Center, Agricultural Research Service, United States Department of Agriculture, Ames, IA, USA.
Parreira VR; Department of Molecular and Cellular Biology, University of Guelph, Guelph, Canada.
Abt B; Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.; German Center for Infection Research (DZIF), Partner site Hannover-Braunschweig, Braunschweig, Germany.
Doden HL; Microbiome Metabolic Engineering Theme, Carl R. Woese Institute for Genomic Biology, Urbana, IL, USA.; Department of Animal Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Ly L; Microbiome Metabolic Engineering Theme, Carl R. Woese Institute for Genomic Biology, Urbana, IL, USA.; Department of Animal Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Alves JMP; Department of Parasitology, Institute of Biomedical Sciences, University of São Paulo, São Paulo, Brazil.
Reichlin M; PharmaBiome AG, Zurich, Switzerland.
Flisikowski K; Chair of Livestock Biotechnology, Weihenstephan School of Life Science, Technical University of Munich, Freising, Germany.
Suarez LN; Institute of Food Chemistry, Hamburg School of Food Science, University of Hamburg, Hamburg, Germany.
Neumann AP; Department of Bacteriology, University of Wisconsin-Madison, Madison, WI, USA.
Suen G; Department of Bacteriology, University of Wisconsin-Madison, Madison, WI, USA.
de Wouters T; PharmaBiome AG, Zurich, Switzerland.
Rohn S; Institute of Food Chemistry, Hamburg School of Food Science, University of Hamburg, Hamburg, Germany.; Institute of Food Technolgy and Food Chemistry, Technische Universität Berlin, Berlin, Germany.
Lagkouvardos I; ZIEL - Institute for Food & Health, Technical University of Munich, Freising, Germany.; Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Center of Marine Research, Heraklion, Greece.
Allen-Vercoe E; Department of Molecular and Cellular Biology, University of Guelph, Guelph, Canada.
Spröer C; Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
Bunk B; Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
Taverne-Thiele AJ; Host-Microbe Interactomics Group, Department of Animal Science, Wageningen University, Wageningen, The Netherlands.
Giesbers M; Electron Microscopy Center, Wageningen University, Wageningen, The Netherlands.
Wells JM; Host-Microbe Interactomics Group, Department of Animal Science, Wageningen University, Wageningen, The Netherlands.
Neuhaus K; ZIEL - Institute for Food & Health, Technical University of Munich, Freising, Germany.
Schnieke A; ZIEL - Institute for Food & Health, Technical University of Munich, Freising, Germany.; Chair of Livestock Biotechnology, Weihenstephan School of Life Science, Technical University of Munich, Freising, Germany.
Cava F; Laboratory for Molecular Infection Medicine Sweden (MIMS), Department of Molecular Biology, Umeå University, Umeå, Sweden.
Segata N; Department CIBIO, University of Trento, Trento, Italy.
Elling L; Laboratory for Biomaterials, Institute for Biotechnology and Helmholtz-Institute for Biomedical Engineering, RWTH Aachen University, Aachen, Germany.
Strowig T; Department of Microbial Immune Regulation, Helmholtz Centre for Infection Research, Braunschweig, Germany.; Hannover Medical School, Hannover, Germany.
Ridlon JM; Microbiome Metabolic Engineering Theme, Carl R. Woese Institute for Genomic Biology, Urbana, IL, USA.; Department of Animal Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Gulder TAM; Chair of Technical Biochemistry, Technical University of Dresden, Dresden, Germany.
Overmann J; Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.; German Center for Infection Research (DZIF), Partner site Hannover-Braunschweig, Braunschweig, Germany.
Clavel T; Functional Microbiome Research Group, RWTH University Hospital, Aachen, Germany. .
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Źródło :
Nature communications [Nat Commun] 2020 Dec 15; Vol. 11 (1), pp. 6389. Date of Electronic Publication: 2020 Dec 15.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Gastrointestinal Microbiome*/genetics
Phylogeny*
Bacteria/*classification
Bacteria/*isolation & purification
Intestines/*microbiology
Swine/*microbiology
Aged, 80 and over ; Animals ; Bacteria/genetics ; Bacteria/metabolism ; Bile Acids and Salts/metabolism ; Biodiversity ; Clostridium/classification ; Clostridium/genetics ; Clostridium/isolation & purification ; Feces/microbiology ; Female ; Genes, Bacterial/genetics ; Host Specificity ; Humans ; Male ; Metagenome ; Multigene Family ; RNA, Ribosomal, 16S
Czasopismo naukowe

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