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Tytuł :
Lineage diversification and niche evolution in the Reeves' Butterfly Lizard Leiolepis reevesii (Agamidae).
Autorzy :
Zhu X; Hangzhou Key Laboratory for Ecosystem Protection and Restoration, College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang, China.; Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Sciences, Nanjing Normal University, Nanjing, Jiangsu, China.
Hua L; Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Sciences, Nanjing Normal University, Nanjing, Jiangsu, China.
Fang M; Hangzhou Key Laboratory for Ecosystem Protection and Restoration, College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang, China.
DU Y; Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Sciences, Nanjing Normal University, Nanjing, Jiangsu, China.; Hainan Key Laboratory of Herpetological Research, College of Fisheries and Life Sciences, Hainan Tropical Ocean University, Sanya, Hainan, China.
Lin C; Hainan Key Laboratory of Herpetological Research, College of Fisheries and Life Sciences, Hainan Tropical Ocean University, Sanya, Hainan, China.
Lin L; Hangzhou Key Laboratory for Ecosystem Protection and Restoration, College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang, China.
Ji X; Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Sciences, Nanjing Normal University, Nanjing, Jiangsu, China.; Hainan Key Laboratory of Herpetological Research, College of Fisheries and Life Sciences, Hainan Tropical Ocean University, Sanya, Hainan, China.; College of Life and Environmental Sciences, Wenzhou University, Wenzhou, Zhejiang, China.
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Źródło :
Integrative zoology [Integr Zool] 2021 May; Vol. 16 (3), pp. 404-419. Date of Electronic Publication: 2020 Dec 21.
Typ publikacji :
Journal Article
MeSH Terms :
Ecosystem*
Phylogeography*
Lizards/*classification
Lizards/*genetics
Animals ; Asia ; DNA, Mitochondrial/genetics ; Female ; Genetic Variation ; Male ; Microsatellite Repeats/genetics ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
A Phylodynamic Workflow to Rapidly Gain Insights into the Dispersal History and Dynamics of SARS-CoV-2 Lineages.
Autorzy :
Dellicour S; Spatial Epidemiology Lab (SpELL), Université Libre de Bruxelles, Bruxelles, Belgium.; Laboratory of Clinical and Epidemiological Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
Durkin K; Department of Human Genetics, CHU Liège, and Medical Genomics, GIGA Research Center, University of Liège, Liège, Belgium.
Hong SL; Laboratory of Clinical and Epidemiological Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
Vanmechelen B; Laboratory of Clinical and Epidemiological Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
Martí-Carreras J; Laboratory of Clinical and Epidemiological Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
Gill MS; Laboratory of Clinical and Epidemiological Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
Meex C; Department of Clinical Microbiology, University of Liège, Liège, Belgium.
Bontems S; Department of Clinical Microbiology, University of Liège, Liège, Belgium.
André E; Laboratory of Clinical and Epidemiological Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
Gilbert M; Spatial Epidemiology Lab (SpELL), Université Libre de Bruxelles, Bruxelles, Belgium.
Walker C; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire, United Kingdom.
Maio N; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire, United Kingdom.
Faria NR; Department of Zoology, University of Oxford, Oxford, United Kingdom.; MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London, United Kingdom.
Hadfield J; Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, WA.
Hayette MP; Department of Clinical Microbiology, University of Liège, Liège, Belgium.
Bours V; Department of Human Genetics, CHU Liège, and Medical Genomics, GIGA Research Center, University of Liège, Liège, Belgium.
Wawina-Bokalanga T; Laboratory of Clinical and Epidemiological Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
Artesi M; Department of Human Genetics, CHU Liège, and Medical Genomics, GIGA Research Center, University of Liège, Liège, Belgium.
Baele G; Laboratory of Clinical and Epidemiological Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
Maes P; Laboratory of Clinical and Epidemiological Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
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Źródło :
Molecular biology and evolution [Mol Biol Evol] 2021 Apr 13; Vol. 38 (4), pp. 1608-1613.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Genome, Viral*
Phylogeography*
COVID-19/*transmission
COVID-19/*virology
SARS-CoV-2/*genetics
Belgium ; COVID-19/epidemiology ; Evolution, Molecular ; Genomics ; Humans ; Likelihood Functions ; Mutation ; Patient Isolation ; Phylogeny ; Physical Distancing ; Spatio-Temporal Analysis ; Workflow
Czasopismo naukowe
Tytuł :
Phylogeography of Mytilisepta virgata (Mytilidae: Bivalvia) in the northwestern Pacific: Cryptic mitochondrial lineages and mito-nuclear discordance.
Autorzy :
Lee Y; Division of EcoScience, Ewha Womans University, 52 Ewhayeodae-gil, Seodaemun-gu, Seoul 03760, South Korea.
Ni G; Ministry of Education Key Laboratory of Mariculture, Ocean University of China, Qingdao 266003, Shandong, China.
Shin J; Division of EcoScience, Ewha Womans University, 52 Ewhayeodae-gil, Seodaemun-gu, Seoul 03760, South Korea.
Kim T; Division of EcoScience, Ewha Womans University, 52 Ewhayeodae-gil, Seodaemun-gu, Seoul 03760, South Korea.
Kern EMA; Division of EcoScience, Ewha Womans University, 52 Ewhayeodae-gil, Seodaemun-gu, Seoul 03760, South Korea.
Kim Y; Division of EcoScience, Ewha Womans University, 52 Ewhayeodae-gil, Seodaemun-gu, Seoul 03760, South Korea.
Kim SC; Department of Biological Sciences, Sungkyunkwan University, 2066 Seobu-ro, Suwon, Gyeonggi-do 16419, South Korea.
Chan B; Biodiversity Research Center, Academia Sinica, Taipei 115, Taiwan.
Goto R; Seto Marine Biological Laboratory, Kyoto University, 459 Shirahama, Nishimuro, Wakayama 649-2211, Japan.
Nakano T; Seto Marine Biological Laboratory, Kyoto University, 459 Shirahama, Nishimuro, Wakayama 649-2211, Japan.
Park JK; Division of EcoScience, Ewha Womans University, 52 Ewhayeodae-gil, Seodaemun-gu, Seoul 03760, South Korea. Electronic address: .
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Apr; Vol. 157, pp. 107037. Date of Electronic Publication: 2020 Dec 03.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeography*
Cell Nucleus/*genetics
Mitochondria/*genetics
Mytilidae/*genetics
Animals ; DNA, Mitochondrial/genetics ; Electron Transport Complex IV/genetics ; Genes, Mitochondrial ; Genetic Variation ; Genetics, Population ; Haplotypes/genetics ; Pacific Ocean ; Phylogeny ; Principal Component Analysis ; Time Factors
Czasopismo naukowe
Tytuł :
Detection of a SARS-CoV-2 variant of concern in South Africa.
Autorzy :
Tegally H; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.
Wilkinson E; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.
Giovanetti M; Laboratorio de Flavivirus, Fundacao Oswaldo Cruz, Rio de Janeiro, Brazil.; Laboratório de Genética Celular e Molecular, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.
Iranzadeh A; Computational Biology Division, Department of Integrative Biomedical Sciences, University of Cape Town, Cape Town, South Africa.
Fonseca V; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.; Laboratório de Genética Celular e Molecular, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.
Giandhari J; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.
Doolabh D; Division of Medical Virology, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
Pillay S; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.
San EJ; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.
Msomi N; Discipline of Virology, School of Laboratory Medicine and Medical Sciences and National Health Laboratory Service (NHLS), University of KwaZulu-Natal, Durban, South Africa.
Mlisana K; NHLS, Johannesburg, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa.
von Gottberg A; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa.; School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.
Walaza S; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa.; School of Public Health, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.
Allam M; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa.
Ismail A; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa.
Mohale T; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa.
Glass AJ; School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.; Department of Molecular Pathology, Lancet Laboratories, Johannesburg, South Africa.
Engelbrecht S; Division of Medical Virology, Faculty of Medicine and Health Sciences, Stellenbosch University and NHLS Tygerberg Hospital, Cape Town, South Africa.
Van Zyl G; Division of Medical Virology, Faculty of Medicine and Health Sciences, Stellenbosch University and NHLS Tygerberg Hospital, Cape Town, South Africa.
Preiser W; Division of Medical Virology, Faculty of Medicine and Health Sciences, Stellenbosch University and NHLS Tygerberg Hospital, Cape Town, South Africa.
Petruccione F; Centre for Quantum Technology, University of KwaZulu-Natal, Durban, South Africa.; National Institute for Theoretical Physics (NITheP), University of KwaZulu-Natal, Durban, South Africa.
Sigal A; Africa Health Research Institute, Durban, South Africa.; School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.; Max Planck Institute for Infection Biology, Berlin, Germany.
Hardie D; Division of Medical Virology, NHLS Groote Schuur Hospital, University of Cape Town, Cape Town, South Africa.
Marais G; Division of Medical Virology, NHLS Groote Schuur Hospital, University of Cape Town, Cape Town, South Africa.
Hsiao NY; Division of Medical Virology, NHLS Groote Schuur Hospital, University of Cape Town, Cape Town, South Africa.
Korsman S; Division of Medical Virology, NHLS Groote Schuur Hospital, University of Cape Town, Cape Town, South Africa.
Davies MA; Centre for Infectious Disease Epidemiology and Research, University of Cape Town, Cape Town, South Africa.; Western Cape Government: Health, Cape Town, South Africa.
Tyers L; Division of Medical Virology, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
Mudau I; Division of Medical Virology, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
York D; Molecular Diagnostics Services, Durban, South Africa.
Maslo C; Department of Quality Leadership, Netcare Hospitals, Johannesburg, South Africa.
Goedhals D; Division of Virology, NHLS Universitas Academic Laboratories, University of The Free State, Bloemfontein, South Africa.
Abrahams S; NHLS, Port Elizabeth, South Africa.
Laguda-Akingba O; NHLS, Port Elizabeth, South Africa.; Department of Laboratory Medicine and Pathology, Faculty of Health Sciences, Walter Sisulu University, Mthatha, South Africa.
Alisoltani-Dehkordi A; Division of Medical Virology, Department of Pathology, University of Cape Town, Cape Town, South Africa.; Division of Biomedical Sciences, University of California Riverside School of Medicine, Riverside, CA, USA.
Godzik A; Division of Biomedical Sciences, University of California Riverside School of Medicine, Riverside, CA, USA.
Wibmer CK; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa.
Sewell BT; Structural Biology Research Unit, Department of Integrative Biomedical Sciences, University of Cape Town, Cape Town, South Africa.
Lourenço J; Department of Zoology, University of Oxford, Oxford, UK.
Alcantara LCJ; Laboratorio de Flavivirus, Fundacao Oswaldo Cruz, Rio de Janeiro, Brazil.; Laboratório de Genética Celular e Molecular, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.
Kosakovsky Pond SL; Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA, USA.
Weaver S; Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA, USA.
Martin D; Computational Biology Division, Department of Integrative Biomedical Sciences, University of Cape Town, Cape Town, South Africa.; Division of Medical Virology, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
Lessells RJ; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa.
Bhiman JN; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa.; School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.
Williamson C; Division of Medical Virology, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa.; Division of Medical Virology, NHLS Groote Schuur Hospital, University of Cape Town, Cape Town, South Africa.
de Oliveira T; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa. .; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa. .; Department of Global Health, University of Washington, Seattle, WA, USA. .
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Źródło :
Nature [Nature] 2021 Apr; Vol. 592 (7854), pp. 438-443. Date of Electronic Publication: 2021 Mar 09.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Mutation*
Phylogeny*
Phylogeography*
COVID-19/*virology
SARS-CoV-2/*genetics
SARS-CoV-2/*isolation & purification
COVID-19/epidemiology ; COVID-19/immunology ; COVID-19/transmission ; DNA Mutational Analysis ; Evolution, Molecular ; Genetic Fitness ; Humans ; Immune Evasion ; Models, Molecular ; SARS-CoV-2/immunology ; SARS-CoV-2/pathogenicity ; Selection, Genetic ; South Africa/epidemiology ; Spike Glycoprotein, Coronavirus/chemistry ; Spike Glycoprotein, Coronavirus/genetics ; Spike Glycoprotein, Coronavirus/metabolism ; Time Factors
SCR Organism :
SARS-CoV-2 variants
Czasopismo naukowe
Tytuł :
Phylogeny and biogeography of Myrcia sect. Aguava (Myrtaceae, Myrteae) based on phylogenomic and Sanger data provide evidence for a Cerrado origin and geographically structured clades.
Autorzy :
Lima DF; Programa de Pós-Graduação em Biologia Vegetal, IB, Universidade Estadual de Campinas, 13083-970 Campinas, SP, Brazil. Electronic address: .
Goldenberg R; Departamento de Botânica, SCB, Universidade Federal do Paraná, 81531-970 Curitiba, PR, Brazil.
Forest F; Jodrell Laboratory, Royal Botanic Gardens, Kew, TW9 3DS Richmond, Surrey, United Kingdom.
Cowan RS; Jodrell Laboratory, Royal Botanic Gardens, Kew, TW9 3DS Richmond, Surrey, United Kingdom.
Lucas EJ; Herbarium, Royal Botanic Gardens, Kew, TW9 3AB Richmond, Surrey, United Kingdom.
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Apr; Vol. 157, pp. 107043. Date of Electronic Publication: 2020 Dec 17.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeny*
Phylogeography*
Myrtaceae/*classification
Myrtaceae/*genetics
Bayes Theorem ; Caribbean Region ; Forests ; Likelihood Functions ; Myrtaceae/anatomy & histology ; Plastids/genetics ; South America
Czasopismo naukowe
Tytuł :
Molecular phylogeny and ancestral biogeographic reconstruction of Platanthera subgenus Limnorchis (Orchidaceae) using target capture methods.
Autorzy :
Wettewa E; Department of Biological Sciences, Mississippi State University, Mississippi State, MS 39762, USA. Electronic address: .
Wallace LE; Department of Biological Sciences, Old Dominion University, Norfolk, VA 23529, USA. Electronic address: .
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Apr; Vol. 157, pp. 107070. Date of Electronic Publication: 2021 Jan 06.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeny*
Phylogeography*
Orchidaceae/*classification
Orchidaceae/*genetics
Sequence Analysis, DNA/*methods
Cell Nucleus/genetics ; DNA, Mitochondrial/genetics ; Genetic Loci ; Species Specificity
Czasopismo naukowe
Tytuł :
India's biogeographic history through the eyes of blindsnakes- filling the gaps in the global typhlopoid phylogeny.
Autorzy :
Sidharthan C; Centre for Ecological Sciences, Indian Institute of Science, Bangalore 560012, India. Electronic address: .
Karanth KP; Centre for Ecological Sciences, Indian Institute of Science, Bangalore 560012, India.
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Apr; Vol. 157, pp. 107064. Date of Electronic Publication: 2020 Dec 31.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeny*
Phylogeography*
Snakes/*classification
Animals ; Bayes Theorem ; Calibration ; Fossils ; Geography ; India ; Oceans and Seas ; Time Factors
Czasopismo naukowe
Tytuł :
Phylotranscriptomics reveals the complex evolutionary and biogeographic history of the genus Tsuga with an East Asian-North American disjunct distribution.
Autorzy :
Feng YY; State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; University of Chinese Academy of Sciences, Beijing 100049, China.
Shen TT; School of Earth Sciences, East China University of Technology, Nanchang 330013, China.
Shao CC; State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.
Du H; State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.
Ran JH; State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; University of Chinese Academy of Sciences, Beijing 100049, China. Electronic address: .
Wang XQ; State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; University of Chinese Academy of Sciences, Beijing 100049, China. Electronic address: .
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Apr; Vol. 157, pp. 107066. Date of Electronic Publication: 2020 Dec 31.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeny*
Phylogeography*
Transcriptome/*genetics
Tsuga/*genetics
DNA, Chloroplast/genetics ; DNA, Mitochondrial/genetics ; Far East ; Genes, Mitochondrial ; Hybridization, Genetic ; North America ; Time Factors ; Tsuga/anatomy & histology ; United States
Czasopismo naukowe
Tytuł :
Phylogeographic Patterns in a Semi-Lithophilous Burrowing Scorpion, Opistophthalmus pallipes , from South Africa.
Autorzy :
Visser JH; Department of Conservation and Marine Sciences, Cape Peninsula University of Technology, Cape Town 8000, South Africa, .
Geerts S; Department of Conservation and Marine Sciences, Cape Peninsula University of Technology, Cape Town 8000, South Africa.
van Vuuren BJ; Centre for Ecological Genomics and Wildlife Conservation, Department of Zoology, University of Johannesburg, Auckland Park 2000, South Africa.
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Źródło :
Zoological science [Zoolog Sci] 2021 Feb; Vol. 38 (1), pp. 36-44.
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeography*
Scorpions/*classification
Scorpions/*genetics
Africa, Southern ; Animals ; DNA, Mitochondrial ; Ecosystem ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Microdiversity and phylogeographic diversification of bacterioplankton in pelagic freshwater systems revealed through long-read amplicon sequencing.
Autorzy :
Okazaki Y; Center for Ecological Research, Kyoto University, 2-509-3 Hirano, Otsu, Shiga, 520-2113, Japan. .; Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology, Central 6, Higashi 1-1-1, Tsukuba, Ibaraki, 305-8566, Japan. .; Institute for Chemical Research, Kyoto University, Gokasho, Uji, Kyoto, 611-0011, Japan. .
Fujinaga S; Center for Ecological Research, Kyoto University, 2-509-3 Hirano, Otsu, Shiga, 520-2113, Japan.
Salcher MM; Department of Aquatic Microbial Ecology, Institute of Hydrobiology, Biology Centre CAS, Na Sádkách 7, 37005, České Budějovice, Czech Republic.; Limnological Station, Institute of Plant and Microbial Biology, University of Zurich, Seestrasse 187, 8802, Kilchberg, Zurich, Switzerland.
Callieri C; CNR, IRSA Institute of Water Research, Largo Tonolli 50, 28922, Verbania, Italy.
Tanaka A; National Institute for Environmental Studies, 16-2 Onogawa, Tsukuba, Ibaraki, 305-8506, Japan.
Kohzu A; National Institute for Environmental Studies, 16-2 Onogawa, Tsukuba, Ibaraki, 305-8506, Japan.
Oyagi H; Faculty of Policy Studies, Nanzan University, 18 Yamazato-cho, Showa-ku, Nagoya, Aichi, 466-8673, Japan.
Tamaki H; Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology, Central 6, Higashi 1-1-1, Tsukuba, Ibaraki, 305-8566, Japan.
Nakano SI; Center for Ecological Research, Kyoto University, 2-509-3 Hirano, Otsu, Shiga, 520-2113, Japan.
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Źródło :
Microbiome [Microbiome] 2021 Jan 22; Vol. 9 (1), pp. 24. Date of Electronic Publication: 2021 Jan 22.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Video-Audio Media
MeSH Terms :
Biodiversity*
Fresh Water*
Phylogeography*
Plankton/*genetics
Plankton/*isolation & purification
Sequence Analysis, DNA/*methods
Aquatic Organisms/classification ; Aquatic Organisms/genetics ; Aquatic Organisms/isolation & purification ; Europe ; Japan ; Phylogeny ; Plankton/classification ; RNA, Ribosomal, 16S/genetics
Czasopismo naukowe
Tytuł :
Revisiting the phylogeny of the genus Lolliguncula Steenstrup 1881 improves understanding of their biogeography and proves the validity of Lolliguncula argus Brakoniecki & Roper, 1985.
Autorzy :
Costa TAS; Federal University of Pará, Faculty for Biological Sciences, Alameda Leandro Ribeiro, 68600-000 Bragança, PA, Brazil; Federal University of Pará, Aquatic Molecular Biology Laboratory, Center for Advanced Biodiversity Studies (CEABIO), Av. Perimetral da Ciência, km 01, PCT-Guamá, Lot 11, 66075-750 Belém, PA, Brazil.
Sales JBL; Federal University of Pará, Aquatic Molecular Biology Laboratory, Center for Advanced Biodiversity Studies (CEABIO), Av. Perimetral da Ciência, km 01, PCT-Guamá, Lot 11, 66075-750 Belém, PA, Brazil. Electronic address: .
Markaida U; Línea de Pesquerías Artesanales, EL Colegio da la Frontera Sur, Lerma, Campeche, Mexico.
Granados-Amores J; Universidad Autónoma de Nayarit-Escuela Nacional de Ingeniería Pesquera, San Blas, Nayarit, Mexico.
Gales SM; Federal University of Pará, Aquatic Molecular Biology Laboratory, Center for Advanced Biodiversity Studies (CEABIO), Av. Perimetral da Ciência, km 01, PCT-Guamá, Lot 11, 66075-750 Belém, PA, Brazil.
Sampaio I; Federal University of Pará, Faculty for Biological Sciences, Alameda Leandro Ribeiro, 68600-000 Bragança, PA, Brazil.
Vallinoto M; Federal University of Pará, Faculty for Biological Sciences, Alameda Leandro Ribeiro, 68600-000 Bragança, PA, Brazil.
Rodrigues-Filho LFS; Federal Rural University of Amazônia, Capanema Campus, 68600-030 Capanema, PA, Brazil.
Ready JS; Federal University of Pará, Aquatic Molecular Biology Laboratory, Center for Advanced Biodiversity Studies (CEABIO), Av. Perimetral da Ciência, km 01, PCT-Guamá, Lot 11, 66075-750 Belém, PA, Brazil.
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Jan; Vol. 154, pp. 106968. Date of Electronic Publication: 2020 Oct 06.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeny*
Phylogeography*
Decapodiformes/*classification
Animals ; Caribbean Region ; Oceans and Seas ; Species Specificity ; Time Factors
Czasopismo naukowe
Tytuł :
Comparative phylogeographic and demographic analyses reveal a congruent pattern of sister relationships between bird populations of the northern and south-central Atlantic Forest.
Autorzy :
Bocalini F; Museu de Zoologia da Universidade de São Paulo, 04263-000 Ipiranga, São Paulo, SP, Brazil; Departamento de Zoologia do Instituto de Biociências, Universidade de São Paulo, 05508-090 São Paulo, SP, Brazil. Electronic address: .
Bolívar-Leguizamón SD; Museu de Zoologia da Universidade de São Paulo, 04263-000 Ipiranga, São Paulo, SP, Brazil.
Silveira LF; Museu de Zoologia da Universidade de São Paulo, 04263-000 Ipiranga, São Paulo, SP, Brazil.
Bravo GA; Museu de Zoologia da Universidade de São Paulo, 04263-000 Ipiranga, São Paulo, SP, Brazil; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA; Museum of Comparative Zoology, Harvard University, Cambridge, MA 02138, USA.
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Jan; Vol. 154, pp. 106973. Date of Electronic Publication: 2020 Oct 13.
Typ publikacji :
Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Forests*
Phylogeography*
Passeriformes/*classification
Animals ; Brazil ; Demography ; Gene Flow ; Genetic Variation ; Genetics, Population ; Haplotypes/genetics ; Mitochondria/genetics ; Passeriformes/genetics ; Phylogeny ; Polymorphism, Single Nucleotide/genetics ; Species Specificity
Czasopismo naukowe
Tytuł :
Contrasting biogeographical patterns in Margarella (Gastropoda: Calliostomatidae: Margarellinae) across the Antarctic Polar Front.
Autorzy :
González-Wevar CA; Instituto de Ciencias Marinas y Limnológicas (ICML), Facultad de Ciencias, Universidad Austral de Chile, Casilla 567, Valdivia, Chile; Instituto Milenio de Ecología y Biodiversidad (IEB), Las Palmeras 3425, Ñuñoa, Santiago, Chile; Centro FONDAP de Investigación en Dinámica de Ecosistemas Marinos de Altas Latitudes (IDEAL), Universidad Austral de Chile, Casilla 567, Valdivia, Chile. Electronic address: .
Segovia NI; Instituto Milenio de Ecología y Biodiversidad (IEB), Las Palmeras 3425, Ñuñoa, Santiago, Chile.
Rosenfeld S; Instituto Milenio de Ecología y Biodiversidad (IEB), Las Palmeras 3425, Ñuñoa, Santiago, Chile; Laboratorio de Ecosistemas Marinos Antárticos y Subantárticos, Universidad de Magallanes, Chile.
Noll D; Instituto Milenio de Ecología y Biodiversidad (IEB), Las Palmeras 3425, Ñuñoa, Santiago, Chile.
Maturana CS; Instituto Milenio de Ecología y Biodiversidad (IEB), Las Palmeras 3425, Ñuñoa, Santiago, Chile.
Hüne M; Instituto Milenio de Ecología y Biodiversidad (IEB), Las Palmeras 3425, Ñuñoa, Santiago, Chile.
Naretto J; Instituto Milenio de Ecología y Biodiversidad (IEB), Las Palmeras 3425, Ñuñoa, Santiago, Chile.
Gérard K; Laboratorio de Ecosistemas Marinos Antárticos y Subantárticos, Universidad de Magallanes, Chile.
Díaz A; Departamento de Zoología, Universidad de Concepción, Barrio Universitario s/n, Concepción, Chile.
Spencer HG; Department of Zoology, University of Otago, Dunedin, New Zealand.
Saucède T; Biogéosciences, UMR CNRS 6282, Université de Bourgogne, 6, boulevard Gabriel, 21000, Dijon, France.
Féral JP; AMU/CNRS/IRD/AU-IMBE-Institut Méditerranéen de Biodiversité et d'Ecologie marine et continentale, UMR 7263, Station Marine d'Endoume, Chemin de la Batterie des Lions, 13007 Marseille, France.
Morley SA; British Antarctic Survey (BAS), Natural Environment Research Council. Madingley Road, High Cross, Cambridge CB30ET, UK.
Brickle P; South Atlantic Environmental Research Institute (SAERI), PO Box 609, Stanley Cottage, Stanley, Falkland Islands, UK.
Wilson NG; Collections & Research, Western Australian Museum, 49 Kew St, Welshpool 6106, Perth, WA, Australia; University of Western Australia, 35 Stirling Highway, Crawley 6009, WA, Australia.
Poulin E; Instituto Milenio de Ecología y Biodiversidad (IEB), Las Palmeras 3425, Ñuñoa, Santiago, Chile.
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Mar; Vol. 156, pp. 107039. Date of Electronic Publication: 2020 Dec 11.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeography*
Gastropoda/*classification
Gastropoda/*genetics
Animals ; Antarctic Regions ; Bayes Theorem ; DNA/genetics ; DNA, Mitochondrial/genetics ; Phylogeny ; Polymorphism, Genetic ; South America ; Species Specificity ; Time Factors
Czasopismo naukowe
Tytuł :
Complete genome sequence and bioinformatics analysis of nine Egyptian females with clinical information from different geographic regions in Egypt.
Autorzy :
ElHefnawi M; School of Information Technology and Computer Science, Nile University, Giza 12588, Egypt; Informatics & Systems Department, the National Research Centre, Cairo, Egypt; Biomedical Informatics and Chemoinformatics Group, Center of Excellence for Medical Research, National Research Centre, Cairo, Egypt. Electronic address: .
Hegazy E; School of Information Technology and Computer Science, Nile University, Giza 12588, Egypt.
Elfiky A; Environmental and Occupational Medicine Department, Environmental Research Division, National Research Centre, Cairo, Egypt.
Jeon Y; Korean Genomics Center (KOGIC), UNIST, Republic of Korea; Department of Biomedical Engineering, School of Life Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan, Republic of Korea.
Jeon S; Korean Genomics Center (KOGIC), UNIST, Republic of Korea; Department of Biomedical Engineering, School of Life Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan, Republic of Korea.
Bhak J; Korean Genomics Center (KOGIC), UNIST, Republic of Korea; Department of Biomedical Engineering, School of Life Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan, Republic of Korea; Personal Genomics Institute, Genome Research Foundation, Osong, Republic of Korea.
Mohamed Metwally F; Environmental and Occupational Medicine Department, Environmental Research Division, National Research Centre, Cairo, Egypt.
Sugano S; The Institute of Medical Science, University of Tokyo, Japan.
Horiuchi T; Graduate School of Frontier Sciences, University of Tokyo, Chiba, Japan.
Kazumi A; The Institute of Medical Science, University of Tokyo, Japan.
Blazyte A; Korean Genomics Center (KOGIC), UNIST, Republic of Korea; Department of Biomedical Engineering, School of Life Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan, Republic of Korea.
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Źródło :
Gene [Gene] 2021 Feb 15; Vol. 769, pp. 145237. Date of Electronic Publication: 2020 Oct 27.
Typ publikacji :
Journal Article
MeSH Terms :
Computational Biology*
Genome, Human*
Phylogeography*
Adult ; DNA, Mitochondrial/genetics ; Egypt ; Female ; Humans ; Middle Aged ; Polymorphism, Single Nucleotide ; Whole Genome Sequencing
Czasopismo naukowe
Tytuł :
Biogeography of land snail genus Acusta (Gastropoda: Camaenidae): Diversification on East Asian islands.
Autorzy :
Hwang CC; Department of Life Sciences, National University of Kaohsiung, Kaohsiung, Taiwan.
Zhou WC; Key Laboratory of Molluscan Quarantine and Identification of AQSIQ, Fujian Entry-Exit Inspection & Quarantine Bureau, Fuzhou, Fujian, China.
Ger MJ; Department of Life Sciences, National University of Kaohsiung, Kaohsiung, Taiwan.
Guo Y; National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention, Shanghai, China.
Qian ZX; Zhejiang Museum of Natural History, Hangzhou, Zhejiang, China.
Wang YC; Department of Bioresources, Dayeh University, Changhua, Taiwan.
Tsai CL; Endemic Species Research Institute, Nantou, Taiwan.
Wu SP; Department of Earth and Life Sciences, University of Taipei, Taipei, Taiwan. Electronic address: .
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Feb; Vol. 155, pp. 106999. Date of Electronic Publication: 2020 Oct 30.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Biodiversity*
Phylogeography*
Snails/*classification
Animals ; Bayes Theorem ; Calibration ; Cell Nucleus/genetics ; Far East ; Genes, Mitochondrial ; Islands ; Phylogeny ; Snails/genetics ; Time Factors
Czasopismo naukowe
Tytuł :
New species boundaries and the diversification history of marsh rat taxa clarify historical connections among ecologically and geographically distinct wetlands of South America.
Autorzy :
Prado JRD; Departamento de Ciências Biológicas, Escola Superior de Agricultura 'Luiz de Queiroz', Universidade de São Paulo, Piracicaba, SP, Brazil. Electronic address: .
Knowles LL; Department of Ecology and Evolutionary Biology, The University of Michigan, Ann Arbor, MI, USA.
Percequillo AR; Departamento de Ciências Biológicas, Escola Superior de Agricultura 'Luiz de Queiroz', Universidade de São Paulo, Piracicaba, SP, Brazil.
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Feb; Vol. 155, pp. 106992. Date of Electronic Publication: 2020 Oct 21.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Biodiversity*
Phylogeography*
Wetlands*
Sigmodontinae/*classification
Animals ; Bayes Theorem ; Discriminant Analysis ; Phylogeny ; South America ; Species Specificity ; Time Factors
Czasopismo naukowe
Tytuł :
Miocene geologic dynamics of the Australian Sahul Shelf determined the biogeographic patterns of freshwater planorbid snails (Miratestinae) in the Indo-Australian Archipelago.
Autorzy :
Gauffre-Autelin P; Department of Animal Ecology and Systematics, Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32 (IFZ), 35392 Giessen, Germany. Electronic address: .
Stelbrink B; Department of Animal Ecology and Systematics, Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32 (IFZ), 35392 Giessen, Germany.
von Rintelen T; Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Invalidenstr. 43, 10115 Berlin, Germany.
Albrecht C; Department of Animal Ecology and Systematics, Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32 (IFZ), 35392 Giessen, Germany.
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Feb; Vol. 155, pp. 107004. Date of Electronic Publication: 2020 Nov 04.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Fresh Water*
Phylogeography*
Snails/*classification
Animals ; Australia ; Bayes Theorem ; Indonesia ; New Guinea ; Philippines ; Phylogeny ; Snails/genetics ; Species Specificity ; Time Factors
Czasopismo naukowe
Tytuł :
Systematics, biogeography and evolution of the Saharo-Arabian naked-toed geckos genus Tropiocolotes.
Autorzy :
Machado L; CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, InBio Laboratório Associado, Rua Padre Armando Quintas, 4485-661 Vairão, Portugal; Departamento de Biologia, Faculdade de Ciências da, Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain. Electronic address: .
Salvi D; CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, InBio Laboratório Associado, Rua Padre Armando Quintas, 4485-661 Vairão, Portugal; Department of Health, Life and Environmental Sciences, University of L'Aquila, L'Aquila, Italy.
James Harris D; CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, InBio Laboratório Associado, Rua Padre Armando Quintas, 4485-661 Vairão, Portugal; Departamento de Biologia, Faculdade de Ciências da, Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal.
Brito JC; CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, InBio Laboratório Associado, Rua Padre Armando Quintas, 4485-661 Vairão, Portugal; Departamento de Biologia, Faculdade de Ciências da, Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal.
Crochet PA; CEFE, Univ Montpellier, CNRS, EPHE, IRD, Univ Paul Valéry Montpellier 3, Montpellier, France.
Geniez P; CEFE, Univ Montpellier, CNRS, PSL-EPHE, IRD, Univ Paul Valéry Montpellier 3, Biogéographie et Ecologie des Vertébrés, Montpellier, France.
Ahmadzadeh F; Department of Biodiversity and Ecosystem Management, Environmental Sciences Research Institute, Shahid Beheshti University, G.C., Evin, Tehran 1983963113, Iran.
Carranza S; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain.
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Feb; Vol. 155, pp. 106969. Date of Electronic Publication: 2020 Oct 06.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Biological Evolution*
Phylogeography*
Lizards/*classification
Africa, Northern ; Animals ; Bayes Theorem ; Haplotypes/genetics ; Likelihood Functions ; Phylogeny ; Species Specificity ; Time Factors
Czasopismo naukowe
Tytuł :
Phylogeny and biogeography of South American marsh pitcher plant genus Heliamphora (Sarraceniaceae) endemic to the Guiana Highlands.
Autorzy :
Liu S; Department of Ecology and Evolutionary Biology, University of Colorado Boulder, 1900 Pleasant Street, Boulder, CO 80309, USA. Electronic address: .
Smith SD; Department of Ecology and Evolutionary Biology, University of Colorado Boulder, 1900 Pleasant Street, Boulder, CO 80309, USA. Electronic address: .
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Źródło :
Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2021 Jan; Vol. 154, pp. 106961. Date of Electronic Publication: 2020 Sep 19.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Phylogeny*
Phylogeography*
Wetlands*
Sarraceniaceae/*classification
Bayes Theorem ; Likelihood Functions ; Models, Biological ; Nucleotides/genetics ; Phenotype ; South America
Czasopismo naukowe
Tytuł :
Historical biogeography of Acer L. (Sapindaceae): genetic evidence for Out-of-Asia hypothesis with multiple dispersals to North America and Europe.
Autorzy :
Gao J; Faculty of Resources and Environment, Baotou Teachers' College, Inner Mongolia University of Science and Technology, Baotou, China.
Liao PC; School of Life Science, National Taiwan Normal University, Taipei, Taiwan. .
Huang BH; School of Life Science, National Taiwan Normal University, Taipei, Taiwan.
Yu T; Beijing Key Laboratory for Forest Resources and Ecosystem Processes, Beijing Forestry University, Beijing, China.
Zhang YY; Beijing Key Laboratory for Forest Resources and Ecosystem Processes, Beijing Forestry University, Beijing, China.
Li JQ; Beijing Key Laboratory for Forest Resources and Ecosystem Processes, Beijing Forestry University, Beijing, China. .
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Źródło :
Scientific reports [Sci Rep] 2020 Dec 03; Vol. 10 (1), pp. 21178. Date of Electronic Publication: 2020 Dec 03.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Models, Biological*
Phylogeography*
Acer/*genetics
Seed Dispersal/*genetics
Base Sequence ; Biodiversity ; Likelihood Functions ; Time Factors
Czasopismo naukowe

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