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Wyszukujesz frazę ""transcriptome"" wg kryterium: Temat


Tytuł :
RNA-sequencing reveals transcriptional signature of pathological remodeling in the diaphragm of rats after myocardial infarction.
Autorzy :
Yegorova S; Department of Applied Physiology and Kinesiology, University of Florida, Gainesville, FL 32611, USA. Electronic address: .
Yegorov O; Department of Neurosurgery, University of Florida, Gainesville, FL 32611, USA. Electronic address: .
Ferreira LF; Department of Applied Physiology and Kinesiology, University of Florida, Gainesville, FL 32611, USA. Electronic address: .
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Źródło :
Gene [Gene] 2021 Feb 20; Vol. 770, pp. 145356. Date of Electronic Publication: 2020 Dec 15.
Typ publikacji :
Journal Article
MeSH Terms :
RNA-Seq*
Transcriptome*
Diaphragm/*metabolism
Muscle Proteins/*biosynthesis
Myocardial Infarction/*metabolism
Animals ; Diaphragm/pathology ; Male ; Myocardial Infarction/genetics ; Myocardial Infarction/pathology ; Rats ; Rats, Sprague-Dawley
Czasopismo naukowe
Tytuł :
De novo assembly of the Mylia taylorii transcriptome and identification of sesquiterpene synthases.
Autorzy :
Yan X; Department of Pharmaceutical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, PR China; Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, 300072, PR China; SynBio Research Platform, Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin, 300072, PR China. Electronic address: .
Li W; Department of Pharmaceutical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, PR China; Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, 300072, PR China; SynBio Research Platform, Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin, 300072, PR China. Electronic address: .
Liang D; Department of Pharmaceutical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, PR China; Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, 300072, PR China; SynBio Research Platform, Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin, 300072, PR China. Electronic address: .
Caiyin Q; Department of Pharmaceutical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, PR China; Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, 300072, PR China; SynBio Research Platform, Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin, 300072, PR China. Electronic address: .
Zhao G; Department of Pharmaceutical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, PR China; Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, 300072, PR China; SynBio Research Platform, Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin, 300072, PR China. Electronic address: .
Zhang Z; Tianjin Research Institute of Forestry and Pomology, Tianjin, 300384, PR China; National Engineering Technology Research Center for Preservation of Agricultural Products, Tianjin, 300384, PR China; Key Laboratory of Storage of Agricultural Products, Ministry of Agriculture and Rural Affairs, Tianjin, 300384, PR China; Tianjin Key Laboratory of Postharvest Physiology and Storage of Agricultural Products, Tianjin, 300384, PR China. Electronic address: .
Wenzhang M; Kunming Institute of Botany, Chinese Academy of Sciences, Yunnan, 650201, PR China. Electronic address: .
Qiao J; Department of Pharmaceutical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, PR China; Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, 300072, PR China; SynBio Research Platform, Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin, 300072, PR China. Electronic address: .
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Źródło :
Archives of biochemistry and biophysics [Arch Biochem Biophys] 2021 Feb 15; Vol. 698, pp. 108742. Date of Electronic Publication: 2020 Dec 25.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Transcriptome*
Hepatophyta/*genetics
Plant Proteins/*analysis
Transferases/*analysis
Amino Acid Sequence ; Biocatalysis ; Gene Expression Profiling ; Oils, Volatile/analysis ; Phylogeny ; Plant Proteins/chemistry ; Plant Proteins/genetics ; Sequence Alignment ; Sesquiterpenes/analysis ; Transferases/chemistry ; Transferases/genetics
Czasopismo naukowe
Tytuł :
Multi-trait transcriptome-wide association studies with probabilistic Mendelian randomization.
Autorzy :
Liu L; Department of Biostatistics, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, Shandong 250012, China.
Zeng P; Department of Epidemiology and Biostatistics, Xuzhou Medical University, Xuzhou, Jiangsu 221004, China.
Xue F; Department of Biostatistics, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, Shandong 250012, China.
Yuan Z; Department of Biostatistics, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, Shandong 250012, China. Electronic address: .
Zhou X; Department of Biostatistics, University of Michigan, Ann Arbor, MI 48109, USA; Center for Statistical Genetics, University of Michigan, Ann Arbor, MI 48109, USA. Electronic address: .
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Źródło :
American journal of human genetics [Am J Hum Genet] 2021 Feb 04; Vol. 108 (2), pp. 240-256.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Genetic Association Studies*
Multifactorial Inheritance*
Transcriptome*
Blood Pressure/genetics ; Computer Simulation ; Genetic Pleiotropy ; Humans ; Linkage Disequilibrium ; Mendelian Randomization Analysis ; Models, Genetic ; Multivariate Analysis ; Phenotype ; Polymorphism, Single Nucleotide
Czasopismo naukowe
Tytuł :
Distinct Transcriptomic Reprogramming in the Wheat Stripe Rust Fungus During the Initial Infection of Wheat and Barberry.
Autorzy :
Zhao J; College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.; State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.
Duan W; College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.
Xu Y; College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.
Zhang C; College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.
Wang L; College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.
Wang J; College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.
Tian S; College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.
Pei G; State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.
Zhan G; College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.; State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.
Zhuang H; College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.; State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.
Zhao J; College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.; State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.
Kang Z; College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.; State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, Shaanxi, People's Republic of China.
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Źródło :
Molecular plant-microbe interactions : MPMI [Mol Plant Microbe Interact] 2021 Feb; Vol. 34 (2), pp. 198-209. Date of Electronic Publication: 2021 Jan 11.
Typ publikacji :
Journal Article
MeSH Terms :
Basidiomycota*/genetics
Berberis*/microbiology
Host-Pathogen Interactions*/genetics
Transcriptome*/genetics
Triticum*/microbiology
Gene Expression Regulation, Fungal ; Plant Diseases/microbiology
Czasopismo naukowe
Tytuł :
Single-cell RNA sequencing reveals heterogeneity and differential expression of decidual tissues during the peripartum period.
Autorzy :
Huang J; Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China.
Li Q; Department of Obstetrics and Gynecology, Wuhan Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
Peng Q; Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China.
Xie Y; Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China.
Wang W; Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China.
Pei C; Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China.
Zhao Y; Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China.
Liu R; Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China.
Huang L; Department of Obstetrics and Gynecology, Changsha Hospital for Maternal and Child Health Care, Changsha, China.
Li T; Department of Obstetrics and Gynecology, Changsha Hospital for Maternal and Child Health Care, Changsha, China.
Xie L; Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China.
Zhang J; Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China.; Hunan Engineering Research Center of Early Life Development and Disease Prevention, Changsha, China.
Dai L; Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China.
Chen J; Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China.
Sun J; Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China.
Zhang W; Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China.; Hunan Engineering Research Center of Early Life Development and Disease Prevention, Changsha, China.
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Źródło :
Cell proliferation [Cell Prolif] 2021 Feb; Vol. 54 (2), pp. e12967. Date of Electronic Publication: 2020 Dec 09.
Typ publikacji :
Journal Article
MeSH Terms :
Transcriptome*
Decidua/*metabolism
Adult ; Cell Cycle/genetics ; Cell Differentiation ; Cell Proliferation ; Cluster Analysis ; Decidua/cytology ; Down-Regulation ; Endothelial Cells/cytology ; Endothelial Cells/metabolism ; Female ; Fibroblasts/cytology ; Fibroblasts/metabolism ; Humans ; Peripartum Period ; Pregnancy ; Sequence Analysis, RNA ; Single-Cell Analysis ; Stromal Cells/cytology ; Stromal Cells/metabolism ; T-Lymphocytes/cytology ; T-Lymphocytes/metabolism ; Trophoblasts/cytology ; Trophoblasts/metabolism ; Up-Regulation
Czasopismo naukowe
Tytuł :
Identification of Dominant Transcripts in Oxidative Stress Response by a Full-Length Transcriptome Analysis.
Autorzy :
Otsuki A; Tohoku Medical Megabank Organization, Tohoku University, Sendai, Japan.; Department of Medical Biochemistry, Graduate School of Medicine, Tohoku University, Sendai, Japan.
Okamura Y; Tohoku Medical Megabank Organization, Tohoku University, Sendai, Japan.; Advanced Research Center for Innovations in Next-Generation Medicine, Tohoku University, Sendai, Japan.
Aoki Y; Tohoku Medical Megabank Organization, Tohoku University, Sendai, Japan.; Graduate School of Information Sciences, Tohoku University, Sendai, Japan.
Ishida N; Tohoku Medical Megabank Organization, Tohoku University, Sendai, Japan.
Kumada K; Tohoku Medical Megabank Organization, Tohoku University, Sendai, Japan.
Minegishi N; Tohoku Medical Megabank Organization, Tohoku University, Sendai, Japan.
Katsuoka F; Tohoku Medical Megabank Organization, Tohoku University, Sendai, Japan.; Department of Medical Biochemistry, Graduate School of Medicine, Tohoku University, Sendai, Japan.; Advanced Research Center for Innovations in Next-Generation Medicine, Tohoku University, Sendai, Japan.
Kinoshita K; Tohoku Medical Megabank Organization, Tohoku University, Sendai, Japan.; Advanced Research Center for Innovations in Next-Generation Medicine, Tohoku University, Sendai, Japan.; Graduate School of Information Sciences, Tohoku University, Sendai, Japan.
Yamamoto M; Tohoku Medical Megabank Organization, Tohoku University, Sendai, Japan .; Department of Medical Biochemistry, Graduate School of Medicine, Tohoku University, Sendai, Japan.; Advanced Research Center for Innovations in Next-Generation Medicine, Tohoku University, Sendai, Japan.
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Źródło :
Molecular and cellular biology [Mol Cell Biol] 2021 Jan 25; Vol. 41 (2). Date of Electronic Publication: 2021 Jan 25 (Print Publication: 2021).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Alternative Splicing*
Transcriptome*
Kelch-Like ECH-Associated Protein 1/*genetics
NF-E2-Related Factor 2/*genetics
RNA, Messenger/*genetics
Cell Line, Transformed ; Cell Nucleus/drug effects ; Cell Nucleus/genetics ; Cell Nucleus/metabolism ; Gene Expression Profiling ; High-Throughput Nucleotide Sequencing ; Humans ; Kelch-Like ECH-Associated Protein 1/chemistry ; Kelch-Like ECH-Associated Protein 1/metabolism ; Lymphocytes/cytology ; Lymphocytes/drug effects ; Lymphocytes/metabolism ; Maleates/pharmacology ; Models, Molecular ; NF-E2-Related Factor 2/chemistry ; NF-E2-Related Factor 2/metabolism ; Oxidative Stress ; Protein Isoforms/chemistry ; Protein Isoforms/genetics ; Protein Isoforms/metabolism ; Protein Structure, Secondary ; RNA, Messenger/classification ; RNA, Messenger/metabolism
Czasopismo naukowe
Tytuł :
Disease severity-specific neutrophil signatures in blood transcriptomes stratify COVID-19 patients.
Autorzy :
Aschenbrenner AC; Systems Medicine, German Center for Neurodegenerative Diseases (DZNE), Bonn, Germany.; PRECISE Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases and the University of Bonn, Bonn, Germany.; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.; Department of Internal Medicine and Radboud Center for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.
Mouktaroudi M; 4th Department of Internal Medicine, National and Kapodistrian University of Athens, Medical School, Athens, Greece.
Krämer B; Department I of Internal Medicine, University Hospital of Bonn (UKB), Bonn, Germany.
Oestreich M; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Antonakos N; 4th Department of Internal Medicine, National and Kapodistrian University of Athens, Medical School, Athens, Greece.
Nuesch-Germano M; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Gkizeli K; 4th Department of Internal Medicine, National and Kapodistrian University of Athens, Medical School, Athens, Greece.
Bonaguro L; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Reusch N; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Baßler K; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Saridaki M; 4th Department of Internal Medicine, National and Kapodistrian University of Athens, Medical School, Athens, Greece.
Knoll R; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Pecht T; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Kapellos TS; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Doulou S; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Kröger C; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Herbert M; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Holsten L; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Horne A; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Gemünd ID; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Rovina N; 1st Department of Pulmonary Medicine and Intensive Care Unit, National and Kapodistrian University of Athens, Medical School, Athens, Greece.
Agrawal S; West German Genome Center (WGGC), University of Bonn, Bonn, Germany.
Dahm K; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
van Uelft M; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Drews A; PRECISE Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases and the University of Bonn, Bonn, Germany.
Lenkeit L; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Bruse N; Department of Intensive Care Medicine and Radboud Center for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.
Gerretsen J; Department of Intensive Care Medicine and Radboud Center for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.
Gierlich J; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Becker M; PRECISE Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases and the University of Bonn, Bonn, Germany.
Händler K; PRECISE Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases and the University of Bonn, Bonn, Germany.
Kraut M; PRECISE Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases and the University of Bonn, Bonn, Germany.
Theis H; PRECISE Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases and the University of Bonn, Bonn, Germany.
Mengiste S; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
De Domenico E; PRECISE Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases and the University of Bonn, Bonn, Germany.
Schulte-Schrepping J; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Seep L; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Raabe J; Department I of Internal Medicine, University Hospital of Bonn (UKB), Bonn, Germany.
Hoffmeister C; Department I of Internal Medicine, University Hospital of Bonn (UKB), Bonn, Germany.
ToVinh M; Department I of Internal Medicine, University Hospital of Bonn (UKB), Bonn, Germany.
Keitel V; Department of Gastroenterology, Hepatology and Infectious Diseases, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
Rieke G; Department I of Internal Medicine, University Hospital of Bonn (UKB), Bonn, Germany.
Talevi V; Population Health Sciences, German Center for Neurodegenerative Diseases (DZNE), Bonn, Germany.
Skowasch D; Department of Internal Medicine II, Section of Pneumology, University Hospital of Bonn (UKB), Bonn, Germany.
Aziz NA; Population Health Sciences, German Center for Neurodegenerative Diseases (DZNE), Bonn, Germany.; Department of Neurology, Faculty of Medicine, University of Bonn, Bonn, Germany.
Pickkers P; Department of Intensive Care Medicine and Radboud Center for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.
van de Veerdonk FL; Department of Internal Medicine and Radboud Center for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.
Netea MG; Department of Internal Medicine and Radboud Center for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.; Immunology & Metabolism, Life and Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Schultze JL; Systems Medicine, German Center for Neurodegenerative Diseases (DZNE), Bonn, Germany.; PRECISE Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases and the University of Bonn, Bonn, Germany.; Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn, Bonn, Germany.
Kox M; Department of Intensive Care Medicine and Radboud Center for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.
Breteler MMB; Population Health Sciences, German Center for Neurodegenerative Diseases (DZNE), Bonn, Germany.; Institute for Medical Biometry, Informatics and Epidemiology (IMBIE), Faculty of Medicine, University of Bonn, Bonn, Germany.
Nattermann J; Department I of Internal Medicine, University Hospital of Bonn (UKB), Bonn, Germany.; German Center for Infection Research (DZIF), Bonn, Germany.
Koutsoukou A; 1st Department of Pulmonary Medicine and Intensive Care Unit, National and Kapodistrian University of Athens, Medical School, Athens, Greece.
Giamarellos-Bourboulis EJ; 4th Department of Internal Medicine, National and Kapodistrian University of Athens, Medical School, Athens, Greece.
Ulas T; Systems Medicine, German Center for Neurodegenerative Diseases (DZNE), Bonn, Germany. .; PRECISE Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases and the University of Bonn, Bonn, Germany. .
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Corporate Authors :
German COVID-19 Omics Initiative (DeCOI)
Źródło :
Genome medicine [Genome Med] 2021 Jan 13; Vol. 13 (1), pp. 7. Date of Electronic Publication: 2021 Jan 13.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Transcriptome*
COVID-19/*pathology
Neutrophils/*metabolism
Antiviral Agents/therapeutic use ; COVID-19/drug therapy ; COVID-19/virology ; Case-Control Studies ; Down-Regulation ; Drug Repositioning ; Humans ; Neutrophils/cytology ; Neutrophils/immunology ; Phenotype ; Principal Component Analysis ; RNA/blood ; RNA/chemistry ; RNA/metabolism ; Sequence Analysis, RNA ; Severity of Illness Index ; Up-Regulation
Czasopismo naukowe
Tytuł :
Hepatic transcriptomic adaptation from prepartum to postpartum in dairy cows.
Autorzy :
Gao ST; State Key Laboratory of Animal Nutrition, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Girma DD; State Key Laboratory of Animal Nutrition, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Bionaz M; Department of Animal and Rangeland Sciences, Oregon State University, Corvallis 97331.
Ma L; State Key Laboratory of Animal Nutrition, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China. Electronic address: .
Bu DP; State Key Laboratory of Animal Nutrition, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China. Electronic address: .
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Źródło :
Journal of dairy science [J Dairy Sci] 2021 Jan; Vol. 104 (1), pp. 1053-1072. Date of Electronic Publication: 2020 Nov 12.
Typ publikacji :
Journal Article
MeSH Terms :
Transcriptome*
Cattle/*metabolism
Liver/*metabolism
Pregnancy, Animal/*metabolism
Adaptation, Physiological ; Animals ; Computational Biology ; Female ; Gluconeogenesis ; Lactation ; Lipid Metabolism/physiology ; Peripartum Period ; Postpartum Period/metabolism ; Pregnancy ; Up-Regulation
Czasopismo naukowe
Tytuł :
Cell type prioritization in single-cell data.
Autorzy :
Skinnider MA; Brain Mind Institute, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland. .; Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada. .
Squair JW; Brain Mind Institute, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland. .; NeuroRestore, Department of Clinical Neuroscience, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Lausanne, Switzerland. .; International Collaboration on Repair Discoveries (ICORD), University of British Columbia, Vancouver, British Columbia, Canada. .
Kathe C; Brain Mind Institute, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.; NeuroRestore, Department of Clinical Neuroscience, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Lausanne, Switzerland.
Anderson MA; Brain Mind Institute, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.; NeuroRestore, Department of Clinical Neuroscience, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Lausanne, Switzerland.
Gautier M; Brain Mind Institute, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.; NeuroRestore, Department of Clinical Neuroscience, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Lausanne, Switzerland.
Matson KJE; Spinal Circuits and Plasticity Unit, National Institute of Neurological Disorders and Stroke, Bethesda, MD, USA.
Milano M; Brain Mind Institute, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.; NeuroRestore, Department of Clinical Neuroscience, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Lausanne, Switzerland.
Hutson TH; Brain Mind Institute, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.; NeuroRestore, Department of Clinical Neuroscience, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Lausanne, Switzerland.
Barraud Q; Brain Mind Institute, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.; NeuroRestore, Department of Clinical Neuroscience, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Lausanne, Switzerland.
Phillips AA; Departments of Physiology and Pharmacology, Clinical Neurosciences, and Cardiac Sciences, Hotchkiss Brain Institute and Libin Cardiovascular Institute of Alberta, Cumming School of Medicine, University of Calgary, Alberta, Canada.
Foster LJ; Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada.; Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada.
La Manno G; Brain Mind Institute, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Levine AJ; Spinal Circuits and Plasticity Unit, National Institute of Neurological Disorders and Stroke, Bethesda, MD, USA.
Courtine G; Brain Mind Institute, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland. .; NeuroRestore, Department of Clinical Neuroscience, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Lausanne, Switzerland. .; Center for Neuroprosthetics, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland. .
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Źródło :
Nature biotechnology [Nat Biotechnol] 2021 Jan; Vol. 39 (1), pp. 30-34. Date of Electronic Publication: 2020 Jul 20.
Typ publikacji :
Journal Article; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Machine Learning*
Transcriptome*/genetics
Transcriptome*/physiology
Computational Biology/*methods
Single-Cell Analysis/*methods
Animals ; Chromatin/genetics ; Chromatin/metabolism ; Databases, Genetic ; Gene Expression Profiling/methods ; Mice ; Nerve Net/metabolism ; Rats ; Sequence Analysis, RNA ; Walking/physiology
Czasopismo naukowe
Tytuł :
Transcriptome sequencing reveals Cnaphalocrocis medinalis against baculovirus infection by oxidative stress.
Autorzy :
Han G; Jiangsu Lixiahe District Institute of Agricultural Sciences, Yangzhou, 225007, China. Electronic address: .
Liu Q; Jiangsu Lixiahe District Institute of Agricultural Sciences, Yangzhou, 225007, China. Electronic address: .
Li C; Jiangsu Lixiahe District Institute of Agricultural Sciences, Yangzhou, 225007, China. Electronic address: .
Xu B; Jiangsu Lixiahe District Institute of Agricultural Sciences, Yangzhou, 225007, China. Electronic address: .
Xu J; Jiangsu Lixiahe District Institute of Agricultural Sciences, Yangzhou, 225007, China. Electronic address: .
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Źródło :
Molecular immunology [Mol Immunol] 2021 Jan; Vol. 129, pp. 63-69. Date of Electronic Publication: 2020 Nov 20.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Granulovirus/*immunology
Lepidoptera/*genetics
Lepidoptera/*virology
Oxidative Stress/*genetics
Transcriptome/*genetics
Virus Diseases/*genetics
Animals ; Antioxidants/metabolism ; DNA Transposable Elements/genetics ; DNA Transposable Elements/immunology ; Down-Regulation/genetics ; Down-Regulation/immunology ; Glutathione Transferase/genetics ; Glutathione Transferase/immunology ; Lepidoptera/immunology ; Moths/genetics ; Moths/immunology ; Moths/virology ; Oxidative Stress/immunology ; Transcriptome/immunology ; Up-Regulation/genetics ; Up-Regulation/immunology ; Virus Diseases/immunology ; Virus Diseases/virology
Czasopismo naukowe
Tytuł :
Comparative transcriptome analysis of SARS-CoV, MERS-CoV, and SARS-CoV-2 to identify potential pathways for drug repurposing.
Autorzy :
Krishnamoorthy P; Department of Biological Sciences, Laboratory of Immunology and Infectious Disease Biology, Indian Institute of Science Education and Research (IISER) Bhopal, Bhopal, 462066, MP, India.
Raj AS; Department of Biological Sciences, Laboratory of Immunology and Infectious Disease Biology, Indian Institute of Science Education and Research (IISER) Bhopal, Bhopal, 462066, MP, India.
Roy S; Microbiology Department, Zoram Medical College, Falkawn, Mizoram, 796005, India.
Kumar NS; Department of Biotechnology, Mizoram University, Aizawl, Mizoram, 796004, India.
Kumar H; Department of Biological Sciences, Laboratory of Immunology and Infectious Disease Biology, Indian Institute of Science Education and Research (IISER) Bhopal, Bhopal, 462066, MP, India; Laboratory of Host Defense, WPI Immunology, Frontier Research Centre, Osaka University, Osaka, 5650871, Japan. Electronic address: .
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Źródło :
Computers in biology and medicine [Comput Biol Med] 2021 Jan; Vol. 128, pp. 104123. Date of Electronic Publication: 2020 Nov 24.
Typ publikacji :
Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Antiviral Agents*
Databases, Nucleic Acid*
Drug Repositioning*
Transcriptome*
COVID-19/*metabolism
Middle East Respiratory Syndrome Coronavirus/*metabolism
SARS Virus/*metabolism
SARS-CoV-2/*metabolism
Severe Acute Respiratory Syndrome/*metabolism
COVID-19/drug therapy ; COVID-19/genetics ; Humans ; Middle East Respiratory Syndrome Coronavirus/genetics ; SARS Virus/genetics ; SARS-CoV-2/genetics ; Severe Acute Respiratory Syndrome/drug therapy ; Severe Acute Respiratory Syndrome/genetics
Czasopismo naukowe
Tytuł :
[Transcriptomic Analysis of csn 2 Gene Mutant Strains of Streptococcus mutans CRISPR-Cas9 System].
Autorzy :
He XY; State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu 610041, China.
Zhang AQ; State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu 610041, China.
Gong T; State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu 610041, China.
Li YQ; State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu 610041, China.
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Źródło :
Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition [Sichuan Da Xue Xue Bao Yi Xue Ban] 2021 Jan; Vol. 52 (1), pp. 76-81.
Typ publikacji :
Journal Article
MeSH Terms :
Streptococcus mutans*/genetics
Transcriptome*
CRISPR-Cas Systems/genetics ; Clustered Regularly Interspaced Short Palindromic Repeats ; Gene Expression Profiling
Czasopismo naukowe
Tytuł :
Comparative transcriptome profiling reveals that brassinosteroid-mediated lignification plays an important role in garlic adaption to salt stress.
Autorzy :
Kong Q; College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Mostafa HHA; Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetics Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China; Central Laboratory of Organic Agriculture, Agricultural Research Center, Giza, 12619, Egypt.
Yang W; Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetics Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China.
Wang J; Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetics Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China.
Nuerawuti M; Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetics Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China.
Wang Y; Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetics Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China.
Song J; Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetics Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China.
Zhang X; Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetics Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China.
Ma L; Shandong Engineering and Technology Research Center for Garlic, Jining, 272200, China.
Wang H; Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetics Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China. Electronic address: .
Li X; Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetics Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China. Electronic address: .
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Źródło :
Plant physiology and biochemistry : PPB [Plant Physiol Biochem] 2021 Jan; Vol. 158, pp. 34-42. Date of Electronic Publication: 2020 Nov 24.
Typ publikacji :
Journal Article
MeSH Terms :
Salt Stress*
Stress, Physiological*
Transcriptome*
Brassinosteroids/*chemistry
Garlic/*physiology
Lignin/*chemistry
Garlic/genetics ; Gene Expression Profiling ; Gene Expression Regulation, Plant ; Genotype
Czasopismo naukowe
Tytuł :
Comparative transcriptome reveals distinct starch-sugar interconversion patterns in potato genotypes contrasting for cold-induced sweetening capacity.
Autorzy :
Liu X; Key Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Key Laboratory of Potato Biology and Biotechnology, Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan 430070, PR China; College of Agronomy and Biotechnology, Southwest University, Key Laboratory of Biology and Genetic Improvement for Tuber and Root Crops in Chongqing, Chongqing 400715, PR China. Electronic address: .
Chen L; Key Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Key Laboratory of Potato Biology and Biotechnology, Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan 430070, PR China; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (South China), Ministry of Agriculture and Rural Affairs, College of Horticulture, South China Agricultural University, Guangzhou 510642, PR China.
Shi W; College of Agronomy and Biotechnology, Southwest University, Key Laboratory of Biology and Genetic Improvement for Tuber and Root Crops in Chongqing, Chongqing 400715, PR China.
Xu X; Key Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Key Laboratory of Potato Biology and Biotechnology, Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan 430070, PR China.
Li Z; College of Agronomy and Biotechnology, Southwest University, Key Laboratory of Biology and Genetic Improvement for Tuber and Root Crops in Chongqing, Chongqing 400715, PR China.
Liu T; Key Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Key Laboratory of Potato Biology and Biotechnology, Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan 430070, PR China.
He Q; Key Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Key Laboratory of Potato Biology and Biotechnology, Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan 430070, PR China.
Xie C; Key Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Key Laboratory of Potato Biology and Biotechnology, Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan 430070, PR China. Electronic address: .
Nie B; Key Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Key Laboratory of Potato Biology and Biotechnology, Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan 430070, PR China. Electronic address: .
Song B; Key Laboratory of Horticultural Plant Biology (HZAU), Ministry of Education, Key Laboratory of Potato Biology and Biotechnology, Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan 430070, PR China. Electronic address: .
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Źródło :
Food chemistry [Food Chem] 2021 Jan 01; Vol. 334, pp. 127550. Date of Electronic Publication: 2020 Jul 13.
Typ publikacji :
Journal Article
MeSH Terms :
Transcriptome*
Solanum tuberosum/*genetics
Starch/*metabolism
Sugars/*metabolism
Sweetening Agents/*metabolism
Cold Temperature ; Down-Regulation ; Genotype ; Hydrolysis ; Plant Proteins/genetics ; Plant Proteins/metabolism ; Plant Tubers/metabolism ; Principal Component Analysis ; Solanum tuberosum/metabolism ; Up-Regulation
Czasopismo naukowe
Tytuł :
Comparative transcriptome analysis of eyestalk from the white shrimp Litopenaeus vannamei after the injection of dopamine.
Autorzy :
Wei C; The Key Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao 266003, PR China.
Pan L; The Key Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao 266003, PR China. Electronic address: .
Zhang X; The Key Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao 266003, PR China.
Tong R; The Key Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao 266003, PR China.
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Źródło :
Gene [Gene] 2020 Dec 30; Vol. 763, pp. 145115. Date of Electronic Publication: 2020 Sep 03.
Typ publikacji :
Journal Article
MeSH Terms :
Synaptic Transmission*
Transcriptome*
Dopamine/*metabolism
Hormones/*metabolism
Penaeidae/*genetics
Animals ; Dopamine/pharmacology ; Eye/metabolism ; Hemocytes/metabolism ; Penaeidae/drug effects ; Penaeidae/metabolism ; Proprotein Convertase 2/genetics ; Proprotein Convertase 2/metabolism ; Stress, Physiological
Czasopismo naukowe
Tytuł :
Automated Isoform Diversity Detector (AIDD): a pipeline for investigating transcriptome diversity of RNA-seq data.
Autorzy :
Plonski NM; Department of Biological Sciences, Kent State University, 256 Cunningham Hall, Kent, OH, 44242, USA.; School of Biomedical Sciences, Kent State University, PO Box 5190, Kent, OH, 44242, USA.
Johnson E; Department of Biological Sciences, Kent State University, 256 Cunningham Hall, Kent, OH, 44242, USA.
Frederick M; Department of Biological Sciences, Kent State University, 256 Cunningham Hall, Kent, OH, 44242, USA.
Mercer H; Department of Biological Sciences, Kent State University, 256 Cunningham Hall, Kent, OH, 44242, USA.; University of Mount Union, 1972 Clark Ave, Alliance, OH, 44601, USA.
Fraizer G; Department of Biological Sciences, Kent State University, 256 Cunningham Hall, Kent, OH, 44242, USA.; School of Biomedical Sciences, Kent State University, PO Box 5190, Kent, OH, 44242, USA.
Meindl R; School of Biomedical Sciences, Kent State University, PO Box 5190, Kent, OH, 44242, USA.; Department of Anthropology, Kent State University, Kent, OH, 44242, USA.
Casadesus G; Department of Biological Sciences, Kent State University, 256 Cunningham Hall, Kent, OH, 44242, USA.; School of Biomedical Sciences, Kent State University, PO Box 5190, Kent, OH, 44242, USA.; Brain Health Research Institute, Kent State University, Kent, OH, 44242, USA.; Department of Pharmacology & Therapeutics, College of Medicine, University of Florida, Gainesville, FL, 32610, USA.
Piontkivska H; Department of Biological Sciences, Kent State University, 256 Cunningham Hall, Kent, OH, 44242, USA. .; School of Biomedical Sciences, Kent State University, PO Box 5190, Kent, OH, 44242, USA. .; Brain Health Research Institute, Kent State University, Kent, OH, 44242, USA. .
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Źródło :
BMC bioinformatics [BMC Bioinformatics] 2020 Dec 30; Vol. 21 (Suppl 18), pp. 578. Date of Electronic Publication: 2020 Dec 30.
Typ publikacji :
Journal Article
MeSH Terms :
Software*
Transcriptome*
Adenosine Deaminase/genetics ; Adenosine Deaminase/metabolism ; Gene Expression ; Gene Ontology ; Humans ; Principal Component Analysis ; Protein Isoforms/genetics ; Protein Isoforms/metabolism ; RNA Editing ; RNA-Seq ; Stem Cells/cytology ; Stem Cells/metabolism ; Stem Cells/virology ; Zika Virus/physiology
Czasopismo naukowe
Tytuł :
Transcriptome analysis and differential gene expression profiling of two contrasting quinoa genotypes in response to salt stress.
Autorzy :
Shi P; Xinyang Agricultural Experiment Station of Yancheng City, Yancheng, 224049, Jiangsu, China.
Gu M; Xinyang Agricultural Experiment Station of Yancheng City, Yancheng, 224049, Jiangsu, China. .
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Źródło :
BMC plant biology [BMC Plant Biol] 2020 Dec 30; Vol. 20 (1), pp. 568. Date of Electronic Publication: 2020 Dec 30.
Typ publikacji :
Journal Article
MeSH Terms :
Transcriptome*
Chenopodium quinoa/*physiology
Salt Stress/*genetics
Chenopodium quinoa/genetics ; Gene Expression Profiling ; Gene Ontology ; Genotype ; Salt Tolerance
Czasopismo naukowe
Tytuł :
De novo assembly and annotation of transcriptomes from two cultivars of Cannabis sativa with different cannabinoid profiles.
Autorzy :
McGarvey P; Innovation Center for Biomedical Informatics, Georgetown University Medical Center, Washington, DC, USA. Electronic address: .
Huang J; Innovation Center for Biomedical Informatics, Georgetown University Medical Center, Washington, DC, USA. Electronic address: .
McCoy M; Innovation Center for Biomedical Informatics, Georgetown University Medical Center, Washington, DC, USA. Electronic address: .
Orvis J; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.
Katsir Y; Technion - Israel Institute of Technology, Haifa, Israel.
Lotringer N; Seàch Medical Group, Givat Chen, Israel. Electronic address: .
Nesher I; Seàch Medical Group, Givat Chen, Israel. Electronic address: .
Kavarana M; Teewinot Life Sciences Corporation, Tampa, FL, USA.
Sun M; Teewinot Life Sciences Corporation, Tampa, FL, USA.
Peet R; Formulate Bioscience, Inc., Lexington, MA, USA.
Meiri D; Technion - Israel Institute of Technology, Haifa, Israel.
Madhavan S; Innovation Center for Biomedical Informatics, Georgetown University Medical Center, Washington, DC, USA. Electronic address: .
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Źródło :
Gene [Gene] 2020 Dec 15; Vol. 762, pp. 145026. Date of Electronic Publication: 2020 Aug 08.
Typ publikacji :
Journal Article
MeSH Terms :
Transcriptome*
Cannabinoids/*biosynthesis
Cannabis/*genetics
Cannabis/classification ; Cannabis/metabolism ; Intramolecular Transferases/genetics ; Intramolecular Transferases/metabolism ; Molecular Sequence Annotation ; Plant Proteins/genetics ; Plant Proteins/metabolism
Czasopismo naukowe
Tytuł :
Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients.
Autorzy :
Xiong Y; State Key Laboratory of Virology, Department of Infectious Disease, Zhongnan Hospital, Wuhan University, Wuhan, People's Republic of China.
Liu Y; State Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, People's Republic of China.
Cao L; The Centre for Infection and Immunity Studies, School of Medicine, Sun Yat-sen University, Guangzhou, People's Republic of China.
Wang D; State Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, People's Republic of China.
Guo M; State Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, People's Republic of China.
Jiang A; State Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, People's Republic of China.
Guo D; State Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, People's Republic of China.
Hu W; State Key Laboratory of Virology, Department of Infectious Disease, Zhongnan Hospital, Wuhan University, Wuhan, People's Republic of China.
Yang J; State Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, People's Republic of China.
Tang Z; State Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, People's Republic of China.
Wu H; BGI PathoGenesis Pharmaceutical Technology, Shenzhen, People's Republic of China.
Lin Y; BGI PathoGenesis Pharmaceutical Technology, Shenzhen, People's Republic of China.
Zhang M; BGI PathoGenesis Pharmaceutical Technology, Shenzhen, People's Republic of China.
Zhang Q; State Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, People's Republic of China.
Shi M; The Centre for Infection and Immunity Studies, School of Medicine, Sun Yat-sen University, Guangzhou, People's Republic of China.
Liu Y; State Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, People's Republic of China.
Zhou Y; State Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, People's Republic of China.
Lan K; State Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, People's Republic of China.
Chen Y; State Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, People's Republic of China.
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Źródło :
Emerging microbes & infections [Emerg Microbes Infect] 2020 Dec; Vol. 9 (1), pp. 761-770.
Typ publikacji :
Journal Article
MeSH Terms :
Bronchoalveolar Lavage Fluid*
Leukocytes, Mononuclear*
Transcriptome*
Chemokines/*analysis
Coronavirus Infections/*genetics
Cytokines/*analysis
Pneumonia, Viral/*genetics
Apoptosis ; Betacoronavirus ; COVID-19 ; Coronavirus Infections/blood ; Coronavirus Infections/immunology ; Humans ; Lymphopenia ; Pandemics ; Pneumonia, Viral/blood ; Pneumonia, Viral/immunology ; RNA-Seq ; SARS-CoV-2 ; Signal Transduction ; Tumor Suppressor Protein p53
Czasopismo naukowe
Tytuł :
Characterization of immune responses and the lung transcriptome in a murine model of IL-33 challenge.
Autorzy :
Piyadasa H; Manitoba Centre for Proteomics and Systems Biology, Department of Internal Medicine, University of Manitoba, Winnipeg, Canada; Department of Immunology, University of Manitoba, Winnipeg, Canada.
Lloyd D; Manitoba Centre for Proteomics and Systems Biology, Department of Internal Medicine, University of Manitoba, Winnipeg, Canada.
Lee AHY; Centre for Microbial Disease and Immunity Research, University of British Columbia, Vancouver, Canada; Department of Molecular Biology & Biochemistry, Simon Fraser University, Burnaby, Canada.
Altieri A; Manitoba Centre for Proteomics and Systems Biology, Department of Internal Medicine, University of Manitoba, Winnipeg, Canada; Department of Immunology, University of Manitoba, Winnipeg, Canada.
Hemshekhar M; Manitoba Centre for Proteomics and Systems Biology, Department of Internal Medicine, University of Manitoba, Winnipeg, Canada.
Osawa N; Manitoba Centre for Proteomics and Systems Biology, Department of Internal Medicine, University of Manitoba, Winnipeg, Canada.
Basu S; Children's Hospital Research Institute of Manitoba, Winnipeg, Canada; Department of Physiology and Pathophysiology, University of Manitoba, Winnipeg, Canada.
Blimkie T; Centre for Microbial Disease and Immunity Research, University of British Columbia, Vancouver, Canada.
Falsafi R; Centre for Microbial Disease and Immunity Research, University of British Columbia, Vancouver, Canada.
Halayko AJ; Children's Hospital Research Institute of Manitoba, Winnipeg, Canada; Department of Physiology and Pathophysiology, University of Manitoba, Winnipeg, Canada.
Hancock REW; Centre for Microbial Disease and Immunity Research, University of British Columbia, Vancouver, Canada.
Mookherjee N; Manitoba Centre for Proteomics and Systems Biology, Department of Internal Medicine, University of Manitoba, Winnipeg, Canada; Department of Immunology, University of Manitoba, Winnipeg, Canada; Children's Hospital Research Institute of Manitoba, Winnipeg, Canada. Electronic address: .
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Źródło :
Biochimica et biophysica acta. Molecular basis of disease [Biochim Biophys Acta Mol Basis Dis] 2020 Dec 01; Vol. 1866 (12), pp. 165950. Date of Electronic Publication: 2020 Aug 22.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Models, Animal*
Transcriptome*
Interleukin-33/*immunology
Lung/*immunology
Lung/*metabolism
Administration, Intranasal ; Animals ; Female ; Interleukin-33/administration & dosage ; Lung/pathology ; Mice ; Mice, Inbred BALB C ; RNA-Seq
Czasopismo naukowe

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