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Tytuł :
Skewed X-inactivation is common in the general female population
Autorzy :
Shvetsova, E
Sofronova, A
Monajemi, R
Gagalova, K
Draisma, HHM
White, SJ
Santen, GWE
Lopes, SMCDS
Heijmans, BT
Van Meurs, J
Jansen, R
Franke, L
Kielbasa, SM
Den Dunnen, JT
't Hoen, PAC
Boomsma, DI
Pool, R
Van Dongen, J
Hottenga, JJ
Van Greevenbroek, MMJ
Da Stehouwer, C
Van der Kallen, CJH
Schalkwijk, CG
Wijmenga, C
Zhernakova, S
Tigchelaar, EF
Slagboom, PE
Beekman, M
Deelen, J
Van Heemst, D
Veldink, JH
Van den Berg, LH
Van Duijn, CM
Hofman, BA
Uitterlinden, AG
Jhamai, PM
Verbiest, M
Suchiman, HED
Verkerk, M
Van der Breggen, R
Van Rooij, J
Lakenberg, N
Mei, H
Bot, J
Zhernakova, DV
't Hof, PV
Deelen, P
Nooren, I
Moed, M
Vermaat, M
Luijk, R
Bonder, MJ
Van Iterson, M
Van Dijk, F
Van Galen, M
Arindrarto, W
Swertz, MA
Van Zwet, EW
Isaacs, A
Francioli, LC
Menelaou, A
Pulit, SL
Palamara, PF
Elbers, CC
Neerincx, PB
Ye, K
Guryev, V
Kloosterman, WP
Abdellaoui, A
Van Leeuwen, EM
Van Oven, M
Li, M
Laros, JF
Karssen, LC
Kanterakis, A
Amin, N
Lameijer, EW
Kattenberg, M
Dijkstra, M
Byelas, H
Van Setten, J
Van Schaik, BD
Nijman, IJ
Renkens, I
Marschall, T
Schonhuth, A
Hehir-Kwa, JY
Handsaker, RE
Polak, P
Sohail, M
Vuzman, D
Hormozdiari, F
Van Enckevort, D
Koval, V
Moed, MH
Van der Velde, KJ
Rivadeneira, F
Estrada, K
Medina-Gomez, C
McCarroll, SA
De Craen, AJ
Suchiman, HE
Oostra, B
Willemsen, G
Platteel, M
Pitts, SJ
Potluri, S
Sundar, P
Cox, DR
Sunyaev, SR
Stoneking, M
De Knijff, P
Kayser, M
Li, Q
Li, Y
Du, Y
Chen, R
Cao, H
Li, N
Cao, S
Wang, J
Bovenberg, JA
Pe'er, I
Van Ommen, GJ
De Bakker, PI
Pokaż więcej
Temat :
Biochemistry & Molecular Biology
VARIABILITY
Receptors, Peptide
ADRENOLEUKODYSTROPHY
CHROMOSOME-INACTIVATION
Polymorphism, Single Nucleotide
CONSEQUENCES
Female
0604 Genetics
DUCHENNE MUSCULAR-DYSTROPHY
EXPRESSION
TRANSLOCATION
Life Sciences & Biomedicine
PATTERNS
BIOS consortium
Netherlands
CARRIERS
Calcium-Binding Proteins
X Chromosome Inactivation
Population
Receptors, Cytoplasmic and Nuclear
DMD LOCUS
Membrane Glycoproteins
Science & Technology
GoNL consortium
Genetics & Heredity
Humans
Intracellular Signaling Peptides and Proteins
Male
Septins
Opis pliku :
application/pdf
Tytuł :
T cell receptor repertoire characteristics both before and following immunotherapy correlate with clinical response in mesothelioma.
Autorzy :
Vroman H; Pulmonary Medicine, Erasmus Medical Center, Rotterdam, The Netherlands.; Cancer Institute, Erasmus Medical Center, Rotterdam, The Netherlands.
Balzaretti G; Clinical Immunology & Rheumatology, Amsterdam UMC - Locatie AMC, Amsterdam, The Netherlands.; Experimental Immunology, Amsterdam UMC - Locatie AMC, Amsterdam, The Netherlands.
Belderbos RA; Pulmonary Medicine, Erasmus Medical Center, Rotterdam, The Netherlands.; Cancer Institute, Erasmus Medical Center, Rotterdam, The Netherlands.
Klarenbeek PL; Clinical Immunology & Rheumatology, Amsterdam UMC - Locatie AMC, Amsterdam, The Netherlands.; Experimental Immunology, Amsterdam UMC - Locatie AMC, Amsterdam, The Netherlands.
van Nimwegen M; Pulmonary Medicine, Erasmus Medical Center, Rotterdam, The Netherlands.
Bezemer K; Pulmonary Medicine, Erasmus Medical Center, Rotterdam, The Netherlands.; Cancer Institute, Erasmus Medical Center, Rotterdam, The Netherlands.
Cornelissen R; Pulmonary Medicine, Erasmus Medical Center, Rotterdam, The Netherlands.
Niewold ITG; Laboratory of Genome Analysis, Amsterdam UMC - Locatie AMC, Amsterdam, The Netherlands.
van Schaik BD; Clinical Epidemiology, Amsterdam UMC - Locatie AMC, Amsterdam, The Netherlands.
van Kampen AH; Clinical Epidemiology, Amsterdam UMC - Locatie AMC, Amsterdam, The Netherlands.
Aerts JGJV; Pulmonary Medicine, Erasmus Medical Center, Rotterdam, The Netherlands.; Cancer Institute, Erasmus Medical Center, Rotterdam, The Netherlands.
de Vries N; Clinical Immunology & Rheumatology, Amsterdam UMC - Locatie AMC, Amsterdam, The Netherlands.
Hendriks RW; Pulmonary Medicine, Erasmus Medical Center, Rotterdam, The Netherlands .
Pokaż więcej
Źródło :
Journal for immunotherapy of cancer [J Immunother Cancer] 2020 Mar; Vol. 8 (1).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Czasopismo naukowe
Tytuł :
Computational Model Reveals Limited Correlation between Germinal Center B-Cell Subclone Abundancy and Affinity: Implications for Repertoire Sequencing.
Autorzy :
Reshetova P; Biosystems Data Analysis, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, Netherlands; Bioinformatics Laboratory, Academic Medical Center, University of Amsterdam, Amsterdam, Netherlands.
van Schaik BD; Bioinformatics Laboratory, Academic Medical Center, University of Amsterdam , Amsterdam , Netherlands.
Klarenbeek PL; Amsterdam Rheumatology and Immunology Center, Academic Medical Center , Amsterdam , Netherlands.
Doorenspleet ME; Amsterdam Rheumatology and Immunology Center, Academic Medical Center , Amsterdam , Netherlands.
Esveldt RE; Amsterdam Rheumatology and Immunology Center, Academic Medical Center , Amsterdam , Netherlands.
Tak PP; Department of Clinical Immunology and Rheumatology, Academic Medical Center, University of Amsterdam , Amsterdam , Netherlands.
Guikema JE; Department of Pathology, Academic Medical Center, University of Amsterdam , Amsterdam , Netherlands.
de Vries N; Amsterdam Rheumatology and Immunology Center, Academic Medical Center , Amsterdam , Netherlands.
van Kampen AH; Biosystems Data Analysis, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, Netherlands; Bioinformatics Laboratory, Academic Medical Center, University of Amsterdam, Amsterdam, Netherlands.
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Źródło :
Frontiers in immunology [Front Immunol] 2017 Mar 06; Vol. 8, pp. 221. Date of Electronic Publication: 2017 Mar 06 (Print Publication: 2017).
Typ publikacji :
Journal Article
Czasopismo naukowe
Tytuł :
Viral metagenomics in drug-naïve, first-onset schizophrenia patients with prominent negative symptoms.
Autorzy :
Canuti M; Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center of the University of Amsterdam, Amsterdam, The Netherlands.
van Beveren NJ; Antes, Institute for Mental Health Care, Rotterdam, The Netherlands; Erasmus University Medical Center, Department of Neuroscience, Rotterdam, The Netherlands; Department of Psychiatry, Erasmus University Medical Center, Rotterdam, The Netherlands.
Jazaeri Farsani SM; Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center of the University of Amsterdam, Amsterdam, The Netherlands; Tehran University of Medical Sciences, Tehran, Iran.
de Vries M; Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center of the University of Amsterdam, Amsterdam, The Netherlands.
Deijs M; Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center of the University of Amsterdam, Amsterdam, The Netherlands.
Jebbink MF; Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center of the University of Amsterdam, Amsterdam, The Netherlands.
Zaaijer HL; Department of Blood-Borne Infections, Sanquin Blood Supply Foundation, Amsterdam, The Netherlands; Laboratory of Clinical Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Amsterdam, The Netherlands.
van Schaik BD; Bioinformatics Laboratory, Department of Clinical Epidemiology, Biostatistics and Bioinformatics, Academic Medical Center, Amsterdam, The Netherlands.
van Kampen AH; Bioinformatics Laboratory, Department of Clinical Epidemiology, Biostatistics and Bioinformatics, Academic Medical Center, Amsterdam, The Netherlands.
van der Kuyl AC; Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center of the University of Amsterdam, Amsterdam, The Netherlands.
de Haan L; Department of Psychiatry, Academic Medical Center, Amsterdam, The Netherlands.
Storosum JG; Department of Psychiatry, Academic Medical Center, Amsterdam, The Netherlands.
van der Hoek L; Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center of the University of Amsterdam, Amsterdam, The Netherlands.
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Źródło :
Psychiatry research [Psychiatry Res] 2015 Oct 30; Vol. 229 (3), pp. 678-84. Date of Electronic Publication: 2015 Aug 15.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Metagenomics*
DNA, Viral/*genetics
Endogenous Retroviruses/*isolation & purification
GB virus C/*isolation & purification
RNA, Viral/*genetics
Schizophrenia/*genetics
Torque teno virus/*isolation & purification
Adult ; DNA, Viral/metabolism ; Endogenous Retroviruses/genetics ; Female ; GB virus C/genetics ; Genome, Viral ; Humans ; Male ; Middle Aged ; Schizophrenia/virology ; Torque teno virus/genetics
Czasopismo naukowe
Tytuł :
Somatic Variation of T-Cell Receptor Genes Strongly Associate with HLA Class Restriction.
Autorzy :
Klarenbeek PL; Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, United States of America; Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, United States of America; Department of Clinical Immunology and Rheumatology, Laboratory for Experimental Immunology, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands; Laboratory for Genome Analysis, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
Doorenspleet ME; Department of Clinical Immunology and Rheumatology, Laboratory for Experimental Immunology, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands; Laboratory for Genome Analysis, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
Esveldt RE; Department of Clinical Immunology and Rheumatology, Laboratory for Experimental Immunology, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
van Schaik BD; Department of Clinical Epidemiology, Biostatistics and Bioinformatics, University of Amsterdam, Amsterdam, The Netherlands.
Lardy N; Department of Immunogenetics, Sanquin Diagnostic Services, Amsterdam, The Netherlands.
van Kampen AH; Department of Clinical Epidemiology, Biostatistics and Bioinformatics, University of Amsterdam, Amsterdam, The Netherlands.
Tak PP; Department of Clinical Immunology and Rheumatology, Laboratory for Experimental Immunology, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
Plenge RM; Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, United States of America; Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, United States of America.
Baas F; Laboratory for Genome Analysis, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
de Bakker PI; Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, United States of America; Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, United States of America; Department of Epidemiology, University Medical Center, Utrecht, The Netherlands; Department of Medical Genetics, University Medical Center, Utrecht, The Netherlands.
de Vries N; Department of Clinical Immunology and Rheumatology, Laboratory for Experimental Immunology, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
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Źródło :
PloS one [PLoS One] 2015 Oct 30; Vol. 10 (10), pp. e0140815. Date of Electronic Publication: 2015 Oct 30 (Print Publication: 2015).
Typ publikacji :
Journal Article
MeSH Terms :
Genes, T-Cell Receptor/*genetics
HLA Antigens/*genetics
CD4-Positive T-Lymphocytes/metabolism ; CD8-Positive T-Lymphocytes/metabolism ; Cell Differentiation/genetics ; Cell Lineage/genetics ; Genes, T-Cell Receptor alpha/genetics ; Genes, T-Cell Receptor beta/genetics ; Genetic Variation ; Humans ; Receptors, Antigen, T-Cell/genetics
Czasopismo naukowe
Tytuł :
Clonal evolution of CD8+ T cell responses against latent viruses: relationship among phenotype, localization, and function.
Autorzy :
Remmerswaal EB; Department of Experimental Immunology, Academic Medical Center, Amsterdam, the Netherlands Renal Transplant Unit, Department of Internal Medicine, Academic Medical Center, Amsterdam, the Netherlands .
Klarenbeek PL; Department of Experimental Immunology, Academic Medical Center, Amsterdam, the Netherlands Department of Clinical Immunology and Rheumatology, Academic Medical Center, Amsterdam, the Netherlands Department of Genome Analysis, Academic Medical Center, Amsterdam, the Netherlands.
Alves NL; Department of Experimental Immunology, Academic Medical Center, Amsterdam, the Netherlands.
Doorenspleet ME; Department of Experimental Immunology, Academic Medical Center, Amsterdam, the Netherlands Department of Clinical Immunology and Rheumatology, Academic Medical Center, Amsterdam, the Netherlands Department of Genome Analysis, Academic Medical Center, Amsterdam, the Netherlands.
van Schaik BD; Department of Clinical Epidemiology, Biostatistics and Bioinformatics, Academic Medical Center, Amsterdam, the Netherlands.
Esveldt RE; Department of Experimental Immunology, Academic Medical Center, Amsterdam, the Netherlands Department of Clinical Immunology and Rheumatology, Academic Medical Center, Amsterdam, the Netherlands Department of Genome Analysis, Academic Medical Center, Amsterdam, the Netherlands.
Idu MM; Department of Surgery, Academic Medical Center, Amsterdam, the Netherlands.
van Leeuwen EM; Department of Experimental Immunology, Academic Medical Center, Amsterdam, the Netherlands.
van der Bom-Baylon N; Department of Experimental Immunology, Academic Medical Center, Amsterdam, the Netherlands Renal Transplant Unit, Department of Internal Medicine, Academic Medical Center, Amsterdam, the Netherlands.
van Kampen AH; Department of Clinical Epidemiology, Biostatistics and Bioinformatics, Academic Medical Center, Amsterdam, the Netherlands.
Koch SD; Department of Experimental Immunology, Academic Medical Center, Amsterdam, the Netherlands.
Pircher H; Institute of Immunology, University of Freiburg, Freiburg, Germany.
Bemelman FJ; Renal Transplant Unit, Department of Internal Medicine, Academic Medical Center, Amsterdam, the Netherlands.
Ten Brinke A; Sanquin Research at CLB, Amsterdam, the Netherlands.
Baas F; Department of Genome Analysis, Academic Medical Center, Amsterdam, the Netherlands.
Ten Berge IJ; Renal Transplant Unit, Department of Internal Medicine, Academic Medical Center, Amsterdam, the Netherlands.
van Lier RA; Department of Experimental Immunology, Academic Medical Center, Amsterdam, the Netherlands Sanquin Research at CLB, Amsterdam, the Netherlands.
de Vries N; Department of Clinical Immunology and Rheumatology, Academic Medical Center, Amsterdam, the Netherlands.
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Źródło :
Journal of virology [J Virol] 2015 Jan; Vol. 89 (1), pp. 568-80. Date of Electronic Publication: 2014 Oct 22.
Typ publikacji :
Journal Article
MeSH Terms :
Clonal Evolution*
Virus Latency*
CD8-Positive T-Lymphocytes/*immunology
Cytomegalovirus/*immunology
Cytomegalovirus/*physiology
T-Lymphocyte Subsets/*immunology
Adolescent ; Adult ; Aged ; Animals ; CD8-Positive T-Lymphocytes/chemistry ; CD8-Positive T-Lymphocytes/classification ; Female ; Flow Cytometry ; Humans ; Male ; Mice ; Middle Aged ; Receptors, Interleukin-7/analysis ; T-Lymphocyte Subsets/chemistry ; T-Lymphocyte Subsets/classification ; Young Adult
Czasopismo naukowe
Tytuł :
Streptococcus pneumoniae arginine synthesis genes promote growth and virulence in pneumococcal meningitis.
Autorzy :
Piet JR; Department of Neurology, Center of Infection and Immunity Amsterdam (CINIMA), Academic Medical Center, P.O. Box 22660, Amsterdam 1100 DD, the Netherlands.
Geldhoff M
van Schaik BD
Brouwer MC
Valls Seron M
Jakobs ME
Schipper K
Pannekoek Y
Zwinderman AH
van der Poll T
van Kampen AH
Baas F
van der Ende A
van de Beek D
Pokaż więcej
Źródło :
The Journal of infectious diseases [J Infect Dis] 2014 Jun 01; Vol. 209 (11), pp. 1781-91. Date of Electronic Publication: 2013 Dec 13.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Arginine/*biosynthesis
Gene Expression Regulation, Bacterial/*physiology
Meningitis, Pneumococcal/*microbiology
Streptococcus pneumoniae/*metabolism
Adult ; Aged ; Aged, 80 and over ; Animals ; Cohort Studies ; Female ; Genome, Bacterial ; Humans ; Male ; Mice ; Middle Aged ; Pneumonia, Pneumococcal/microbiology ; Streptococcus pneumoniae/genetics ; Virulence
Czasopismo naukowe
Tytuł :
Rheumatoid arthritis synovial tissue harbours dominant B-cell and plasma-cell clones associated with autoreactivity.
Autorzy :
Doorenspleet ME; Department of Clinical Immunology & Rheumatology, Academic Medical Center of the University of Amsterdam, , Amsterdam, The Netherlands.
Klarenbeek PL
de Hair MJ
van Schaik BD
Esveldt RE
van Kampen AH
Gerlag DM
Musters A
Baas F
Tak PP
de Vries N
Pokaż więcej
Źródło :
Annals of the rheumatic diseases [Ann Rheum Dis] 2014 Apr; Vol. 73 (4), pp. 756-62. Date of Electronic Publication: 2013 Apr 20.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Arthritis, Rheumatoid/*immunology
Autoimmunity/*immunology
B-Lymphocytes/*immunology
Synovial Membrane/*immunology
Amino Acid Sequence ; Arthritis, Rheumatoid/genetics ; Clone Cells/immunology ; Complementarity Determining Regions/genetics ; Complementarity Determining Regions/immunology ; Female ; Humans ; Immunoglobulin Class Switching/immunology ; Immunoglobulin Heavy Chains/genetics ; Immunoglobulin Variable Region/genetics ; Lymphocyte Activation/immunology ; Male ; Molecular Sequence Data ; Plasma Cells/immunology ; Severity of Illness Index
Czasopismo naukowe
Tytuł :
Deep sequencing of antiviral T-cell responses to HCMV and EBV in humans reveals a stable repertoire that is maintained for many years.
Autorzy :
Klarenbeek PL; Department of Clinical Immunology & Rheumatology, Academic Medical Center, Amsterdam, the Netherlands.
Remmerswaal EB
ten Berge IJ
Doorenspleet ME
van Schaik BD
Esveldt RE
Koch SD
ten Brinke A
van Kampen AH
Bemelman FJ
Tak PP
Baas F
de Vries N
van Lier RA
Pokaż więcej
Źródło :
PLoS pathogens [PLoS Pathog] 2012 Sep; Vol. 8 (9), pp. e1002889. Date of Electronic Publication: 2012 Sep 27.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
CD8-Positive T-Lymphocytes/*immunology
Cytomegalovirus/*immunology
Cytomegalovirus Infections/*immunology
Epstein-Barr Virus Infections/*immunology
Herpesvirus 4, Human/*immunology
Receptors, Antigen, T-Cell/*genetics
Antigens, Viral/immunology ; Cytomegalovirus/genetics ; Herpesvirus 4, Human/genetics ; High-Throughput Nucleotide Sequencing ; Humans ; Kidney Transplantation/immunology ; Middle Aged ; Time Factors ; Virus Latency ; Young Adult
Czasopismo naukowe
Tytuł :
Performance of VIDISCA-454 in feces-suspensions and serum.
Autorzy :
de Vries M; Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center of the University of Amsterdam, 1105AZ, Amsterdam, The Netherlands. />Oude Munnink BB
Deijs M
Canuti M
Koekkoek SM
Molenkamp R
Bakker M
Jurriaans S
van Schaik BD
Luyf AC
Olabarriaga SD
van Kampen AH
van der Hoek L
Pokaż więcej
Źródło :
Viruses [Viruses] 2012 Aug; Vol. 4 (8), pp. 1328-34. Date of Electronic Publication: 2012 Aug 22.
Typ publikacji :
Evaluation Study; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Caliciviridae Infections/*diagnosis
Feces/*virology
HIV Infections/*diagnosis
HIV-1/*isolation & purification
Norovirus/*isolation & purification
Nucleic Acid Amplification Techniques/*methods
Serum/*virology
Adolescent ; Adult ; Caliciviridae Infections/virology ; HIV Infections/virology ; HIV-1/genetics ; Humans ; Male ; Norovirus/genetics ; Young Adult
Czasopismo naukowe
Tytuł :
Inflamed target tissue provides a specific niche for highly expanded T-cell clones in early human autoimmune disease.
Autorzy :
Klarenbeek PL; Department of Clinical Immunology and Rheumatology, Academic Medical Center/ University of Amsterdam, Amsterdam, The Netherlands.
de Hair MJ
Doorenspleet ME
van Schaik BD
Esveldt RE
van de Sande MG
Cantaert T
Gerlag DM
Baeten D
van Kampen AH
Baas F
Tak PP
de Vries N
Pokaż więcej
Źródło :
Annals of the rheumatic diseases [Ann Rheum Dis] 2012 Jun; Vol. 71 (6), pp. 1088-93. Date of Electronic Publication: 2012 Jan 31.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Arthritis, Rheumatoid/*immunology
Arthritis, Rheumatoid/*pathology
Autoimmunity/*immunology
T-Lymphocytes/*cytology
T-Lymphocytes/*immunology
Biopsy ; Cellular Microenvironment/immunology ; Clone Cells/cytology ; Clone Cells/immunology ; Disease Progression ; Humans ; Synovial Membrane/immunology ; Synovial Membrane/pathology
Czasopismo naukowe
Tytuł :
Heterozygous missense mutations in SMARCA2 cause Nicolaides-Baraitser syndrome.
Autorzy :
Van Houdt JK; Center for Human Genetics, Catholic University Leuven, University Hospital Gasthuisberg, Leuven, Belgium.
Nowakowska BA
Sousa SB
van Schaik BD
Seuntjens E
Avonce N
Sifrim A
Abdul-Rahman OA
van den Boogaard MJ
Bottani A
Castori M
Cormier-Daire V
Deardorff MA
Filges I
Fryer A
Fryns JP
Gana S
Garavelli L
Gillessen-Kaesbach G
Hall BD
Horn D
Huylebroeck D
Klapecki J
Krajewska-Walasek M
Kuechler A
Lines MA
Maas S
Macdermot KD
McKee S
Magee A
de Man SA
Moreau Y
Morice-Picard F
Obersztyn E
Pilch J
Rosser E
Shannon N
Stolte-Dijkstra I
Van Dijck P
Vilain C
Vogels A
Wakeling E
Wieczorek D
Wilson L
Zuffardi O
van Kampen AH
Devriendt K
Hennekam R
Vermeesch JR
Pokaż więcej
Źródło :
Nature genetics [Nat Genet] 2012 Feb 26; Vol. 44 (4), pp. 445-9, S1. Date of Electronic Publication: 2012 Feb 26.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Chromosomal Proteins, Non-Histone/*genetics
Foot Deformities, Congenital/*genetics
Hypotrichosis/*genetics
Intellectual Disability/*genetics
Transcription Factors/*genetics
Adolescent ; Adult ; Amino Acid Sequence ; Base Sequence ; Child ; Child, Preschool ; Chromatin Assembly and Disassembly ; Chromosomal Proteins, Non-Histone/metabolism ; Facies ; Genes, Regulator ; Humans ; Infant ; Male ; Molecular Sequence Data ; Mutation, Missense ; Sequence Alignment ; Sequence Analysis, DNA ; Transcription Factors/chemistry ; Transcription Factors/metabolism ; Transcription, Genetic ; Young Adult
SCR Disease Name :
Nicolaides Baraitser syndrome
Czasopismo naukowe
Tytuł :
Provenance for distributed biomedical workflow execution.
Autorzy :
Madougou S; Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
Santcroos M
Benabdelkader A
van Schaik BD
Shahand S
Korkhov V
van Kampen AH
Olabarriaga SD
Pokaż więcej
Źródło :
Studies in health technology and informatics [Stud Health Technol Inform] 2012; Vol. 175, pp. 91-100.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Algorithms*
Biological Science Disciplines*
Internet*
Software*
Workflow*
Biomedical Research/*methods
Czasopismo naukowe
Tytuł :
Looking ultra deep: short identical sequences and transcriptional slippage.
Autorzy :
Ritz K; Department of Genome Analysis, Academic Medical Center, University of Amsterdam, Meibergdreef 9, 1105AZ Amsterdam, The Netherlands.
van Schaik BD
Jakobs ME
Aronica E
Tijssen MA
van Kampen AH
Baas F
Pokaż więcej
Źródło :
Genomics [Genomics] 2011 Aug; Vol. 98 (2), pp. 90-5. Date of Electronic Publication: 2011 May 23.
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression Profiling*
Transcription, Genetic*
High-Throughput Nucleotide Sequencing/*methods
Alternative Splicing ; Base Sequence/genetics ; Computational Biology ; Exons/genetics ; Gene Expression Regulation ; Humans ; Introns/genetics ; RNA Splice Sites/genetics
Czasopismo naukowe
Tytuł :
Genome sequence of Neisseria meningitidis serogroup B strain H44/76.
Autorzy :
Piet JR; Department of Medical Microbiology, Academic Medical Center, Amsterdam, The Netherlands.
Huis in 't Veld RA
van Schaik BD
van Kampen AH
Baas F
van de Beek D
Pannekoek Y
van der Ende A
Pokaż więcej
Źródło :
Journal of bacteriology [J Bacteriol] 2011 May; Vol. 193 (9), pp. 2371-2. Date of Electronic Publication: 2011 Mar 04.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Genome, Bacterial*
Neisseria meningitidis, Serogroup B/*classification
Neisseria meningitidis, Serogroup B/*genetics
Molecular Sequence Annotation ; Molecular Sequence Data
Czasopismo naukowe
Tytuł :
SGCE isoform characterization and expression in human brain: implications for myoclonus-dystonia pathogenesis?
Autorzy :
Ritz K; Department of Genome Analysis, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
van Schaik BD
Jakobs ME
van Kampen AH
Aronica E
Tijssen MA
Baas F
Pokaż więcej
Źródło :
European journal of human genetics : EJHG [Eur J Hum Genet] 2011 Apr; Vol. 19 (4), pp. 438-44. Date of Electronic Publication: 2010 Dec 15.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Alternative Splicing/*genetics
Mutation/*genetics
Sarcoglycans/*genetics
Aged ; Aged, 80 and over ; Brain/metabolism ; Dystonic Disorders/genetics ; Dystonic Disorders/metabolism ; Female ; Genomic Imprinting ; Humans ; Male ; Middle Aged ; Neurons/metabolism ; Pedigree ; Phenotype ; Protein Isoforms/genetics ; Purkinje Cells/metabolism
SCR Disease Name :
Myoclonic dystonia
Czasopismo naukowe
Tytuł :
A sensitive assay for virus discovery in respiratory clinical samples.
Autorzy :
de Vries M; Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam, Academic Medical Center of the University of Amsterdam, Amsterdam, The Netherlands.
Deijs M
Canuti M
van Schaik BD
Faria NR
van de Garde MD
Jachimowski LC
Jebbink MF
Jakobs M
Luyf AC
Coenjaerts FE
Claas EC
Molenkamp R
Koekkoek SM
Lammens C
Leus F
Goossens H
Ieven M
Baas F
van der Hoek L
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Źródło :
PloS one [PLoS One] 2011 Jan 24; Vol. 6 (1), pp. e16118. Date of Electronic Publication: 2011 Jan 24.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Diagnostic Techniques, Respiratory System/*standards
Polymerase Chain Reaction/*methods
Respiratory Tract Infections/*diagnosis
Viruses/*isolation & purification
DNA, Complementary/genetics ; DNA, Viral/analysis ; High-Throughput Nucleotide Sequencing ; RNA, Ribosomal/genetics ; Respiratory Tract Infections/virology ; Sensitivity and Specificity ; Viral Load/methods ; Viruses/genetics
Czasopismo naukowe
Tytuł :
Initial steps towards a production platform for DNA sequence analysis on the grid.
Autorzy :
Luyf AC; Bioinformatics Laboratory, Department of Clinical Epidemiology, Biostatistics and Bioinformatics, Academic Medical Center, PO Box 22700, 1100 DE Amsterdam, The Netherlands.
van Schaik BD
de Vries M
Baas F
van Kampen AH
Olabarriaga SD
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Źródło :
BMC bioinformatics [BMC Bioinformatics] 2010 Dec 14; Vol. 11, pp. 598. Date of Electronic Publication: 2010 Dec 14.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Computational Biology/*methods
Information Storage and Retrieval/*methods
Sequence Analysis, DNA/*methods
Computer Systems ; High-Throughput Nucleotide Sequencing/methods ; Sequence Alignment ; Software ; Workflow
Czasopismo naukowe

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