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Wyszukujesz frazę ""Protein Structure, Quaternary"" wg kryterium: Wszystkie pola


Tytuł:
Lyophilized annelid mega-hemoglobin retains its' quaternary structure and oxygen equilibrium properties after room temperature storage for over 6 months.
Autorzy:
Savla C; William G. Lowrie Department of Chemical and Biomolecular Engineering, The Ohio State University, Columbus, Ohio, United States of America.
Palmer AF; William G. Lowrie Department of Chemical and Biomolecular Engineering, The Ohio State University, Columbus, Ohio, United States of America.
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Źródło:
PloS one [PLoS One] 2022 Feb 17; Vol. 17 (2), pp. e0263996. Date of Electronic Publication: 2022 Feb 17 (Print Publication: 2022).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:
Protein Structure, Quaternary*
Temperature*
Freeze Drying/*methods
Hemoglobins/*chemistry
Hemoglobins/*metabolism
Oligochaeta/*metabolism
Oxygen/*metabolism
Animals ; Oxidation-Reduction ; Oxygen/chemistry
Czasopismo naukowe
Tytuł:
Engineered receptors for human cytomegalovirus that are orthogonal to normal human biology.
Autorzy:
Park J; Department of Biochemistry, University of Illinois, Urbana, Illinois, United States of America.
Gill KS; Department of Biochemistry, University of Illinois, Urbana, Illinois, United States of America.
Aghajani AA; Department of Biochemistry, University of Illinois, Urbana, Illinois, United States of America.
Heredia JD; Department of Biochemistry, University of Illinois, Urbana, Illinois, United States of America.
Choi H; Department of Biochemistry, University of Illinois, Urbana, Illinois, United States of America.
Oberstein A; Department of Microbiology and Immunology, University of Illinois College of Medicine, Chicago, Illinois, United States of America.
Procko E; Department of Biochemistry, University of Illinois, Urbana, Illinois, United States of America.; Cancer Center at Illinois (CCIL), University of Illinois, Urbana, Illinois, United States of America.
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Źródło:
PLoS pathogens [PLoS Pathog] 2020 Jun 19; Vol. 16 (6), pp. e1008647. Date of Electronic Publication: 2020 Jun 19 (Print Publication: 2020).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Cytomegalovirus*/chemistry
Cytomegalovirus*/genetics
Cytomegalovirus*/metabolism
Cytomegalovirus Infections*/genetics
Cytomegalovirus Infections*/metabolism
Protein Structure, Quaternary*
Receptors, Virus*/chemistry
Receptors, Virus*/genetics
Receptors, Virus*/metabolism
Cell Line ; Epithelial Cells/metabolism ; Epithelial Cells/pathology ; Epithelial Cells/virology ; Fibroblasts/metabolism ; Fibroblasts/pathology ; Fibroblasts/virology ; Humans ; Mutation ; Protein Domains ; Receptor, Platelet-Derived Growth Factor alpha/chemistry ; Receptor, Platelet-Derived Growth Factor alpha/genetics ; Receptor, Platelet-Derived Growth Factor alpha/metabolism
Czasopismo naukowe
Tytuł:
QUATgo: Protein quaternary structural attributes predicted by two-stage machine learning approaches with heterogeneous feature encoding.
Autorzy:
Tung CH; Department of Bioinformatics, Chung-Hua University, Hsinchu, Taiwan (R.O.C.).
Chien CH; Ph.D. Program in Medical Biotechnology, National Chung Hsing University, Taichung City, Taiwan (R.O.C.).; Institute of Genomics and Bioinformatics, National Chung Hsing University, Taichung City, Taiwan (R.O.C.).
Chen CW; Institute of Genomics and Bioinformatics, National Chung Hsing University, Taichung City, Taiwan (R.O.C.).; Department of Computer Science and Engineering, National Chung Hsing University, Taichung City, Taiwan (R.O.C.).
Huang LY; Institute of Genomics and Bioinformatics, National Chung Hsing University, Taichung City, Taiwan (R.O.C.).
Liu YN; Institute of Genomics and Bioinformatics, National Chung Hsing University, Taichung City, Taiwan (R.O.C.).
Chu YW; Institute of Genomics and Bioinformatics, National Chung Hsing University, Taichung City, Taiwan (R.O.C.).; Institute of Molecular Biology, National Chung Hsing University, Taichung City, Taiwan (R.O.C.).; Agricultural Biotechnology Center, National Chung Hsing University, Taichung City, Taiwan (R.O.C.).; Biotechnology Center, National Chung Hsing University, Taichung City, Taiwan (R.O.C.).; Ph.D. Program in Translational Medicine, National Chung Hsing University, Taichung City, Taiwan (R.O.C.).; Rong Hsing Research Center For Translational Medicine, Taichung City, Taiwan (R.O.C.).
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Źródło:
PloS one [PLoS One] 2020 Apr 29; Vol. 15 (4), pp. e0232087. Date of Electronic Publication: 2020 Apr 29 (Print Publication: 2020).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Machine Learning*
Protein Structure, Quaternary*
Software*
Computational Biology/*methods
Proteins/*chemistry
Sequence Analysis, Protein/*methods
Viral Proteins/*chemistry
Algorithms ; Animals ; Databases, Protein ; Humans ; Protein Domains ; Proteins/classification ; Support Vector Machine
Czasopismo naukowe
Tytuł:
Evolution of interface binding strengths in simplified model of protein quaternary structure.
Autorzy:
Leonard AS; Theory of Condensed Matter, Cavendish Laboratory, University of Cambridge, Cambridge, United Kingdom.; Sainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom.
Ahnert SE; Theory of Condensed Matter, Cavendish Laboratory, University of Cambridge, Cambridge, United Kingdom.; Sainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom.
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Źródło:
PLoS computational biology [PLoS Comput Biol] 2019 Jun 03; Vol. 15 (6), pp. e1006886. Date of Electronic Publication: 2019 Jun 03 (Print Publication: 2019).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Evolution, Molecular*
Protein Structure, Quaternary*/genetics
Protein Structure, Quaternary*/physiology
Proteins*/chemistry
Proteins*/genetics
Algorithms ; Computational Biology ; Protein Binding
Czasopismo naukowe
Tytuł:
Comparison of a retroviral protease in monomeric and dimeric states.
Autorzy:
Wosicki S; Center for Biocrystallographic Research, Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznan, Poland.
Gilski M; Center for Biocrystallographic Research, Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznan, Poland.
Zabranska H; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, 166 10 Prague, Czech Republic.
Pichova I; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, 166 10 Prague, Czech Republic.
Jaskolski M; Center for Biocrystallographic Research, Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznan, Poland.
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Źródło:
Acta crystallographica. Section D, Structural biology [Acta Crystallogr D Struct Biol] 2019 Oct 01; Vol. 75 (Pt 10), pp. 904-917. Date of Electronic Publication: 2019 Sep 20.
Typ publikacji:
Comparative Study; Journal Article
MeSH Terms:
Protein Multimerization*
Protein Structure, Quaternary*
Endopeptidases/*chemistry
Mason-Pfizer monkey virus/*enzymology
Endopeptidases/genetics ; Mutation ; Peptidomimetics/chemistry ; Protease Inhibitors/chemistry
Czasopismo naukowe
Tytuł:
Accurate Classification of Biological and non-Biological Interfaces in Protein Crystal Structures using Subtle Covariation Signals.
Autorzy:
Fukasawa Y; Artificial Intelligence Research Center, National Institute of Advanced Industrial Science and Technology (AIST), 2-4-7 Aomi, Koto-ku, Tokyo, 135-0064, Japan. .
Tomii K; Artificial Intelligence Research Center, National Institute of Advanced Industrial Science and Technology (AIST), 2-4-7 Aomi, Koto-ku, Tokyo, 135-0064, Japan. .; Biotechnology Research Institute for Drug Discovery, National Institute of Advanced Industrial Science and Technology (AIST), 2-4-7 Aomi, Koto-ku, Tokyo, 135-0064, Japan. .; AIST-Tokyo Tech Real World Big-Data Computation Open Innovation Laboratory, Tokyo, 152-8550, Japan. .
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Źródło:
Scientific reports [Sci Rep] 2019 Aug 30; Vol. 9 (1), pp. 12603. Date of Electronic Publication: 2019 Aug 30.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Protein Conformation*
Protein Interaction Domains and Motifs*
Protein Structure, Quaternary*
Proteins/*chemistry
Algorithms ; Amino Acid Sequence/genetics ; Computational Biology ; Crystallography, X-Ray ; Databases, Protein ; Protein Binding/genetics ; Protein Multimerization/genetics ; Proteins/classification ; Proteins/genetics ; Sequence Alignment
Czasopismo naukowe
Tytuł:
Aβ(M1-40) and Wild-Type Aβ40 Self-Assemble into Oligomers with Distinct Quaternary Structures.
Autorzy:
Bouchard JL; Department of Medicinal Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. .
Davey TC; Department of Medicinal Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. .
Doran TM; Department of Medicinal Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. .; Institute for Translational Neuroscience, University of Minnesota, Minneapolis, MN 55455, USA. .
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Źródło:
Molecules (Basel, Switzerland) [Molecules] 2019 Jun 15; Vol. 24 (12). Date of Electronic Publication: 2019 Jun 15.
Typ publikacji:
Journal Article
MeSH Terms:
Protein Multimerization*
Protein Structure, Quaternary*
Amyloid beta-Peptides/*chemistry
Amyloid beta-Peptides/genetics ; Humans ; Mutation ; Native Polyacrylamide Gel Electrophoresis ; Protein Aggregates ; Protein Aggregation, Pathological ; Protein Folding ; Recombinant Proteins ; Structure-Activity Relationship
Czasopismo naukowe
Tytuł:
Analysis of crystalline and solution states of ligand-free spermidine N-acetyltransferase (SpeG) from Escherichia coli.
Autorzy:
Filippova EV; Center for Structural Genomics of Infectious Diseases, Department of Biochemistry and Molecular Genetics, Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA.
Weigand S; DND-CAT Synchrotron Research Center, Argonne National Laboratory, Argonne, IL 60439, USA.
Kiryukhina O; Center for Structural Genomics of Infectious Diseases, Department of Biochemistry and Molecular Genetics, Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA.
Wolfe AJ; Department of Microbiology and Immunology, Stritch School of Medicine, Loyola University Chicago Health Sciences Division, Maywood, IL 60153, USA.
Anderson WF; Center for Structural Genomics of Infectious Diseases, Department of Biochemistry and Molecular Genetics, Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA.
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Źródło:
Acta crystallographica. Section D, Structural biology [Acta Crystallogr D Struct Biol] 2019 Jun 01; Vol. 75 (Pt 6), pp. 545-553. Date of Electronic Publication: 2019 May 28.
Typ publikacji:
Journal Article
MeSH Terms:
Models, Molecular*
Protein Structure, Quaternary*
Acetyltransferases/*chemistry
Escherichia coli K12/*enzymology
Escherichia coli Proteins/*chemistry
Crystallization ; Crystallography, X-Ray/methods
Czasopismo naukowe
Tytuł:
Automated evaluation of quaternary structures from protein crystals.
Autorzy:
Bliven S; Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen, Switzerland.; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, United States of America.
Lafita A; Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen, Switzerland.; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.
Parker A; Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen, Switzerland.; Scientific IT Services, ETH Zurich, Zurich, Switzerland.
Capitani G; Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen, Switzerland.; Department of Biology, ETH Zurich, Zurich, Switzerland.
Duarte JM; Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen, Switzerland.; Department of Biology, ETH Zurich, Zurich, Switzerland.; RCSB Protein Data Bank, SDSC, University of California San Diego, La Jolla, California, United States of America.
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Źródło:
PLoS computational biology [PLoS Comput Biol] 2018 Apr 30; Vol. 14 (4), pp. e1006104. Date of Electronic Publication: 2018 Apr 30 (Print Publication: 2018).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Protein Structure, Quaternary*
Proteins/*chemistry
Algorithms ; Computational Biology ; Crystallography, X-Ray/statistics & numerical data ; Databases, Protein/statistics & numerical data ; Models, Molecular ; Protein Interaction Domains and Motifs ; Software
Czasopismo naukowe
Tytuł:
Connecting color with assembly in the fluorescent B-phycoerythrin protein complex.
Autorzy:
Leney AC; Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences and Netherlands Proteomics Centre, Utrecht University, Utrecht, The Netherlands.
Tschanz A; Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences and Netherlands Proteomics Centre, Utrecht University, Utrecht, The Netherlands.
Heck AJR; Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences and Netherlands Proteomics Centre, Utrecht University, Utrecht, The Netherlands.
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Źródło:
The FEBS journal [FEBS J] 2018 Jan; Vol. 285 (1), pp. 178-187. Date of Electronic Publication: 2017 Nov 28.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Protein Structure, Quaternary*
Coloring Agents/*chemistry
Phycoerythrin/*chemistry
Pigments, Biological/*chemistry
Color ; Coloring Agents/metabolism ; Fluorescence ; Mass Spectrometry ; Models, Molecular ; Phycoerythrin/metabolism ; Pigments, Biological/metabolism ; Porphyridium/metabolism ; Protein Subunits/chemistry ; Protein Subunits/metabolism ; Spectrometry, Fluorescence
Czasopismo naukowe
Tytuł:
The 2.0 Å X-ray structure for yeast acetohydroxyacid synthase provides new insights into its cofactor and quaternary structure requirements.
Autorzy:
Lonhienne T; The School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD, Australia.
Garcia MD; The School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD, Australia.
Fraser JA; The School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD, Australia.
Williams CM; The School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD, Australia.
Guddat LW; The School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD, Australia.
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Źródło:
PloS one [PLoS One] 2017 Feb 08; Vol. 12 (2), pp. e0171443. Date of Electronic Publication: 2017 Feb 08 (Print Publication: 2017).
Typ publikacji:
Journal Article
MeSH Terms:
Models, Molecular*
Protein Structure, Quaternary*
Acetolactate Synthase/*chemistry
Flavin-Adenine Dinucleotide/*chemistry
Saccharomyces cerevisiae/*enzymology
Acetolactate Synthase/metabolism ; Amino Acid Sequence ; Catalysis ; Flavin-Adenine Dinucleotide/metabolism ; Oxidation-Reduction ; Oxygen/chemistry ; Protein Multimerization
Czasopismo naukowe
Tytuł:
The role of dimer asymmetry and protomer dynamics in enzyme catalysis.
Autorzy:
Kim TH; Department of Chemistry, University of Toronto, Mississauga, Ontario L5L 1C6, Canada.
Mehrabi P; Department of Medical Biophysics, University of Toronto, Toronto, Ontario M5G 1L7, Canada.; Ontario Cancer Institute/Princess Margaret Cancer Centre, Campbell Family Institute for Cancer Research, Toronto, Ontario M5G 1L7, Canada.
Ren Z; Department of Chemistry, University of Illinois, Chicago, IL 60607, USA.; Renz Research Inc., Westmont, IL 60559, USA.
Sljoka A; CREST, Japan Science and Technology Agency (JST), Department of Informatics, School of Science and Technology, Kwansei Gakuin University, Japan.
Ing C; Department of Biochemistry, University of Toronto, Toronto, Ontario M5S 1A8, Canada.; Program in Molecular Structure and Function, Research Institute, Hospital for Sick Children, Toronto, Ontario M5G 1X8, Canada.
Bezginov A; Department of Medical Biophysics, University of Toronto, Toronto, Ontario M5G 1L7, Canada.
Ye L; Department of Chemistry, University of Toronto, Mississauga, Ontario L5L 1C6, Canada.
Pomès R; Department of Biochemistry, University of Toronto, Toronto, Ontario M5S 1A8, Canada.; Program in Molecular Structure and Function, Research Institute, Hospital for Sick Children, Toronto, Ontario M5G 1X8, Canada.
Prosser RS; Department of Chemistry, University of Toronto, Mississauga, Ontario L5L 1C6, Canada. .; Department of Biochemistry, University of Toronto, Toronto, Ontario M5S 1A8, Canada.
Pai EF; Department of Medical Biophysics, University of Toronto, Toronto, Ontario M5G 1L7, Canada. .; Ontario Cancer Institute/Princess Margaret Cancer Centre, Campbell Family Institute for Cancer Research, Toronto, Ontario M5G 1L7, Canada.; Department of Biochemistry, University of Toronto, Toronto, Ontario M5S 1A8, Canada.; Department of Molecular Genetics, University of Toronto, Toronto, Ontario M5S 1A8, Canada.
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Źródło:
Science (New York, N.Y.) [Science] 2017 Jan 20; Vol. 355 (6322).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Biocatalysis*
Protein Structure, Quaternary*
Bacterial Proteins/*chemistry
Hydrolases/*chemistry
Rhodopseudomonas/*enzymology
Allosteric Regulation ; Crystallography, X-Ray ; Entropy ; Nuclear Magnetic Resonance, Biomolecular ; Protein Binding ; Protein Multimerization ; Substrate Specificity ; Water/chemistry
Czasopismo naukowe
Tytuł:
Characterization of Three Different Unusual S-Layer Proteins from Viridibacillus arvi JG-B58 That Exhibits Two Super-Imposed S-Layer Proteins.
Autorzy:
Suhr M; Helmholtz-Zentrum Dresden-Rossendorf, Helmholtz Institute Freiberg for Resource Technology, Freiberg, Germany.
Lederer FL; Helmholtz-Zentrum Dresden-Rossendorf, Helmholtz Institute Freiberg for Resource Technology, Freiberg, Germany.
Günther TJ; Helmholtz-Zentrum Dresden-Rossendorf, Helmholtz Institute Freiberg for Resource Technology, Freiberg, Germany.
Raff J; Helmholtz-Zentrum Dresden-Rossendorf, Helmholtz Institute Freiberg for Resource Technology, Freiberg, Germany.; Helmholtz-Zentrum Dresden-Rossendorf, Institute of Resource Ecology, Dresden, Germany.
Pollmann K; Helmholtz-Zentrum Dresden-Rossendorf, Helmholtz Institute Freiberg for Resource Technology, Freiberg, Germany.
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Źródło:
PloS one [PLoS One] 2016 Jun 10; Vol. 11 (6), pp. e0156785. Date of Electronic Publication: 2016 Jun 10 (Print Publication: 2016).
Typ publikacji:
Journal Article
MeSH Terms:
Bacillaceae*/chemistry
Bacillaceae*/growth & development
Bacillaceae*/metabolism
Protein Multimerization*
Protein Structure, Quaternary*
Cell Wall/*chemistry
Membrane Glycoproteins/*chemistry
Membrane Glycoproteins/*metabolism
Bacterial Proteins/chemistry ; Bacterial Proteins/isolation & purification ; Bacterial Proteins/metabolism ; Cell Wall/drug effects ; Cell Wall/metabolism ; Crystallization ; Membrane Glycoproteins/isolation & purification ; Metals, Heavy/pharmacology ; Microscopy, Atomic Force ; Water Pollutants, Chemical/pharmacology
Czasopismo naukowe
Tytuł:
Platelet activation via dynamic conformational changes of von Willebrand factor under shear.
Autorzy:
Pushin DM; National Research Center for Hematology, Moscow, Russia.; Moscow Institute of Physics and Technology, Dolgoprudny, Russia.
Salikhova TY; Moscow Institute of Physics and Technology, Dolgoprudny, Russia.
Zlobina KE; National Research Center for Hematology, Moscow, Russia.
Guria GT; National Research Center for Hematology, Moscow, Russia.; Moscow Institute of Physics and Technology, Dolgoprudny, Russia.
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Źródło:
PloS one [PLoS One] 2020 Jun 11; Vol. 15 (6), pp. e0234501. Date of Electronic Publication: 2020 Jun 11 (Print Publication: 2020).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Models, Biological*
Blood Platelets/*physiology
Platelet Activation/*physiology
Protein Structure, Quaternary/*physiology
von Willebrand Factor/*metabolism
Humans ; Molecular Dynamics Simulation ; Platelet Glycoprotein GPIb-IX Complex/metabolism ; Protein Multimerization/physiology ; Protein Stability ; Stress, Mechanical ; Structure-Activity Relationship
Czasopismo naukowe
Tytuł:
From crystal structure of α-conotoxin GIC in complex with Ac-AChBP to molecular determinants of its high selectivity for α3β2 nAChR.
Autorzy:
Lin B; Key Laboratory of Tropical Biological Resources, Ministry of Education, Key Lab for Marine Drugs of Haikou, Hainan University, Haikou Hainan 570228, P. R. China.
Xu M; Ministry of Education Key Laboratory of Protein Science, Beijing Advanced Innovation Center for Structural Biology, Collaborative Innovation Center for Biotherapy, School of Life Sciences, Tsinghua University, Beijing 100084, P. R. China.
Zhu X; Key Laboratory of Tropical Biological Resources, Ministry of Education, Key Lab for Marine Drugs of Haikou, Hainan University, Haikou Hainan 570228, P. R. China.
Wu Y; Key Laboratory of Tropical Biological Resources, Ministry of Education, Key Lab for Marine Drugs of Haikou, Hainan University, Haikou Hainan 570228, P. R. China.
Liu X; Ministry of Education Key Laboratory of Protein Science, Beijing Advanced Innovation Center for Structural Biology, Collaborative Innovation Center for Biotherapy, School of Life Sciences, Tsinghua University, Beijing 100084, P. R. China.
Zhangsun D; Key Laboratory of Tropical Biological Resources, Ministry of Education, Key Lab for Marine Drugs of Haikou, Hainan University, Haikou Hainan 570228, P. R. China.
Hu Y; Key Laboratory of Tropical Biological Resources, Ministry of Education, Key Lab for Marine Drugs of Haikou, Hainan University, Haikou Hainan 570228, P. R. China.
Xiang SH; Nebraska Centre for Virology, School of Veterinary Medicine and Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE 68583, USA.
Kasheverov IE; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya Street, 16/10 Moscow 117997, Russia.
Tsetlin VI; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya Street, 16/10 Moscow 117997, Russia.
Wang X; Ministry of Education Key Laboratory of Protein Science, Beijing Advanced Innovation Center for Structural Biology, Collaborative Innovation Center for Biotherapy, School of Life Sciences, Tsinghua University, Beijing 100084, P. R. China.
Luo S; Key Laboratory of Tropical Biological Resources, Ministry of Education, Key Lab for Marine Drugs of Haikou, Hainan University, Haikou Hainan 570228, P. R. China.
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Źródło:
Scientific reports [Sci Rep] 2016 Mar 01; Vol. 6, pp. 22349. Date of Electronic Publication: 2016 Mar 01.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Protein Structure, Quaternary*
Carrier Proteins/*metabolism
Conotoxins/*metabolism
Receptors, Nicotinic/*metabolism
Acetylcholine/metabolism ; Amino Acid Sequence ; Animals ; Aplysia ; Binding Sites ; Crystallography, X-Ray ; Molecular Docking Simulation ; Protein Binding ; Protein Structure, Tertiary
Czasopismo naukowe
Tytuł:
QuaBingo: A Prediction System for Protein Quaternary Structure Attributes Using Block Composition.
Autorzy:
Tung CH; Department of Bioinformatics, Chung-Hua University, Room S116, No. 707, Section 2, WuFu Road, Hsinchu 30012, Taiwan.
Chen CW; Institute of Genomics and Bioinformatics, National Chung Hsing University, 250 Kuo Kuang Road, Taichung 402, Taiwan.
Guo RC; Institute of Genomics and Bioinformatics, National Chung Hsing University, 250 Kuo Kuang Road, Taichung 402, Taiwan.
Ng HF; Department of Computer Science, Universiti Tunku Abdul Rahman, Jalan Universiti, 31900 Kampar, Malaysia.
Chu YW; Institute of Genomics and Bioinformatics, National Chung Hsing University, 250 Kuo Kuang Road, Taichung 402, Taiwan; Biotechnology Center, Agricultural Biotechnology Center, Institute of Molecular Biology, Graduate Institute of Biotechnology, National Chung Hsing University, 250 Kuo Kuang Road, Taichung 402, Taiwan.
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Źródło:
BioMed research international [Biomed Res Int] 2016; Vol. 2016, pp. 9480276. Date of Electronic Publication: 2016 Aug 17.
Typ publikacji:
Journal Article
MeSH Terms:
Algorithms*
Models, Molecular*
Protein Structure, Quaternary*
Proteins/*chemistry
Proteins/*ultrastructure
Sequence Analysis, Protein/*methods
Amino Acid Sequence ; Computer Simulation ; Models, Chemical ; Molecular Sequence Data ; Pattern Recognition, Automated/methods ; Support Vector Machine
Czasopismo naukowe
Tytuł:
Disassembly of the self-assembled, double-ring structure of proteasome α7 homo-tetradecamer by α6.
Autorzy:
Ishii K; Okazaki Institute for Integrative Bioscience, National Institutes of Natural Sciences, 5-1 Higashiyama, Myodaiji, Okazaki, Aichi 444-8787, Japan.
Noda M; Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan.
Yagi H; Graduate School of Pharmaceutical Sciences, Nagoya City University, 3-1 Tanabe-dori, Mizuho-ku, Nagoya, Aichi 467-8603, Japan.
Thammaporn R; Faculty of Science, Kasetsart University, Bangkean, Bangkok 10900, Thailand.; Institute for Molecular Science, National Institutes of Natural Sciences, 5-1 Higashiyama, Myodaiji, Okazaki, Aichi 444-8787, Japan.
Seetaha S; Faculty of Science, Kasetsart University, Bangkean, Bangkok 10900, Thailand.; Institute for Molecular Science, National Institutes of Natural Sciences, 5-1 Higashiyama, Myodaiji, Okazaki, Aichi 444-8787, Japan.
Satoh T; Graduate School of Pharmaceutical Sciences, Nagoya City University, 3-1 Tanabe-dori, Mizuho-ku, Nagoya, Aichi 467-8603, Japan.; JST, PRESTO, 3-1 Tanabe-dori, Mizuho-ku, Nagoya, Aichi 467-8603, Japan.
Kato K; Okazaki Institute for Integrative Bioscience, National Institutes of Natural Sciences, 5-1 Higashiyama, Myodaiji, Okazaki, Aichi 444-8787, Japan.; Graduate School of Pharmaceutical Sciences, Nagoya City University, 3-1 Tanabe-dori, Mizuho-ku, Nagoya, Aichi 467-8603, Japan.; Institute for Molecular Science, National Institutes of Natural Sciences, 5-1 Higashiyama, Myodaiji, Okazaki, Aichi 444-8787, Japan.
Uchiyama S; Okazaki Institute for Integrative Bioscience, National Institutes of Natural Sciences, 5-1 Higashiyama, Myodaiji, Okazaki, Aichi 444-8787, Japan.; Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan.
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Źródło:
Scientific reports [Sci Rep] 2015 Dec 14; Vol. 5, pp. 18167. Date of Electronic Publication: 2015 Dec 14.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Protein Multimerization*
Protein Structure, Quaternary*
Proteasome Endopeptidase Complex/*chemistry
Crystallography, X-Ray ; Humans ; Mass Spectrometry ; Models, Molecular ; Proteasome Endopeptidase Complex/genetics ; Proteasome Endopeptidase Complex/metabolism ; Ultracentrifugation
Czasopismo naukowe
Tytuł:
An Origin of Cooperative Oxygen Binding of Human Adult Hemoglobin: Different Roles of the α and β Subunits in the α2β2 Tetramer.
Autorzy:
Nagatomo S; Department of Chemistry, University of Tsukuba, Tsukuba, Ibaraki, Japan.
Nagai Y; Research Center for Micro-Nano Technology, Hosei University, Koganei, Tokyo, Japan,3 School of Health Sciences, College of Medical, Pharmaceutical and Health Sciences, Kanazawa University, Kanazawa, Ishikawa, Japan,4 Department of Frontier Biosciences, Hosei University, Koganei, Tokyo, Japan,5 Picobiology Institute, Graduate School of Life Science, University of Hyogo, RSC-UH Leading Program Center, Sayo, Sayo-gun, Hyogo, Japan.
Aki Y; Research Center for Micro-Nano Technology, Hosei University, Koganei, Tokyo, Japan,3 School of Health Sciences, College of Medical, Pharmaceutical and Health Sciences, Kanazawa University, Kanazawa, Ishikawa, Japan,4 Department of Frontier Biosciences, Hosei University, Koganei, Tokyo, Japan,5 Picobiology Institute, Graduate School of Life Science, University of Hyogo, RSC-UH Leading Program Center, Sayo, Sayo-gun, Hyogo, Japan.
Sakurai H; Research Center for Micro-Nano Technology, Hosei University, Koganei, Tokyo, Japan,3 School of Health Sciences, College of Medical, Pharmaceutical and Health Sciences, Kanazawa University, Kanazawa, Ishikawa, Japan,4 Department of Frontier Biosciences, Hosei University, Koganei, Tokyo, Japan,5 Picobiology Institute, Graduate School of Life Science, University of Hyogo, RSC-UH Leading Program Center, Sayo, Sayo-gun, Hyogo, Japan.
Imai K; Research Center for Micro-Nano Technology, Hosei University, Koganei, Tokyo, Japan,3 School of Health Sciences, College of Medical, Pharmaceutical and Health Sciences, Kanazawa University, Kanazawa, Ishikawa, Japan,4 Department of Frontier Biosciences, Hosei University, Koganei, Tokyo, Japan,5 Picobiology Institute, Graduate School of Life Science, University of Hyogo, RSC-UH Leading Program Center, Sayo, Sayo-gun, Hyogo, Japan.
Mizusawa N; Research Center for Micro-Nano Technology, Hosei University, Koganei, Tokyo, Japan,3 School of Health Sciences, College of Medical, Pharmaceutical and Health Sciences, Kanazawa University, Kanazawa, Ishikawa, Japan,4 Department of Frontier Biosciences, Hosei University, Koganei, Tokyo, Japan,5 Picobiology Institute, Graduate School of Life Science, University of Hyogo, RSC-UH Leading Program Center, Sayo, Sayo-gun, Hyogo, Japan; Research Center for Micro-Nano Technology, Hosei University, Koganei, Tokyo, Japan,3 School of Health Sciences, College of Medical, Pharmaceutical and Health Sciences, Kanazawa University, Kanazawa, Ishikawa, Japan,4 Department of Frontier Biosciences, Hosei University, Koganei, Tokyo, Japan,5 Picobiology Institute, Graduate School of Life Science, University of Hyogo, RSC-UH Leading Program Center, Sayo, Sayo-gun, Hyogo, Japan.
Ogura T; Research Center for Micro-Nano Technology, Hosei University, Koganei, Tokyo, Japan,3 School of Health Sciences, College of Medical, Pharmaceutical and Health Sciences, Kanazawa University, Kanazawa, Ishikawa, Japan,4 Department of Frontier Biosciences, Hosei University, Koganei, Tokyo, Japan,5 Picobiology Institute, Graduate School of Life Science, University of Hyogo, RSC-UH Leading Program Center, Sayo, Sayo-gun, Hyogo, Japan.
Kitagawa T; Research Center for Micro-Nano Technology, Hosei University, Koganei, Tokyo, Japan,3 School of Health Sciences, College of Medical, Pharmaceutical and Health Sciences, Kanazawa University, Kanazawa, Ishikawa, Japan,4 Department of Frontier Biosciences, Hosei University, Koganei, Tokyo, Japan,5 Picobiology Institute, Graduate School of Life Science, University of Hyogo, RSC-UH Leading Program Center, Sayo, Sayo-gun, Hyogo, Japan.
Nagai M; Research Center for Micro-Nano Technology, Hosei University, Koganei, Tokyo, Japan,3 School of Health Sciences, College of Medical, Pharmaceutical and Health Sciences, Kanazawa University, Kanazawa, Ishikawa, Japan,4 Department of Frontier Biosciences, Hosei University, Koganei, Tokyo, Japan,5 Picobiology Institute, Graduate School of Life Science, University of Hyogo, RSC-UH Leading Program Center, Sayo, Sayo-gun, Hyogo, Japan; Research Center for Micro-Nano Technology, Hosei University, Koganei, Tokyo, Japan,3 School of Health Sciences, College of Medical, Pharmaceutical and Health Sciences, Kanazawa University, Kanazawa, Ishikawa, Japan,4 Department of Frontier Biosciences, Hosei University, Koganei, Tokyo, Japan,5 Picobiology Institute, Graduate School of Life Science, University of Hyogo, RSC-UH Leading Program Center, Sayo, Sayo-gun, Hyogo, Japan.
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Źródło:
PloS one [PLoS One] 2015 Aug 05; Vol. 10 (8), pp. e0135080. Date of Electronic Publication: 2015 Aug 05 (Print Publication: 2015).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Protein Multimerization*
Protein Structure, Quaternary*
Hemoglobins/*chemistry
Oxygen/*chemistry
Adult ; Circular Dichroism ; Glycine/chemistry ; Glycine/metabolism ; Hemoglobins/metabolism ; Histidine/chemistry ; Histidine/metabolism ; Humans ; Hydrogen Bonding ; Imidazoles/chemistry ; Imidazoles/metabolism ; Iron/chemistry ; Iron/metabolism ; Magnetic Resonance Spectroscopy ; Models, Molecular ; Oxygen/metabolism ; Protein Binding ; Spectrophotometry ; Spectrum Analysis, Raman ; alpha-Globins/chemistry ; alpha-Globins/metabolism ; beta-Globins/chemistry ; beta-Globins/metabolism
Czasopismo naukowe
Tytuł:
Two classes of bacterial IMPDHs according to their quaternary structures and catalytic properties.
Autorzy:
Alexandre T; Institut Pasteur, Unité de Chimie et Biocatalyse, Département de Biologie Structurale et Chimie, 28 rue du Dr Roux, F-75015, Paris, France; Centre Nationale de la Recherche Scientifique, Unité Mixte de Recherche 3523, F-75015, Paris, France; Université Paris Diderot, Sorbonne Paris Cité, F-75205, Paris, France.
Raynal B
Munier-Lehmann H; Institut Pasteur, Unité de Chimie et Biocatalyse, Département de Biologie Structurale et Chimie, 28 rue du Dr Roux, F-75015, Paris, France; Centre Nationale de la Recherche Scientifique, Unité Mixte de Recherche 3523, F-75015, Paris, France.
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Źródło:
PloS one [PLoS One] 2015 Feb 23; Vol. 10 (2), pp. e0116578. Date of Electronic Publication: 2015 Feb 23 (Print Publication: 2015).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Models, Molecular*
Protein Structure, Quaternary*
Bacterial Proteins/*metabolism
IMP Dehydrogenase/*metabolism
Bacteria/metabolism ; Binding Sites ; Catalysis ; Crystallography, X-Ray
Czasopismo naukowe
Tytuł:
Structure of mycobacterial maltokinase, the missing link in the essential GlgE-pathway.
Autorzy:
Fraga J; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal.
Maranha A; CNC - Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal.
Mendes V; CNC - Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal.
Pereira PJ; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal.
Empadinhas N; CNC - Center for Neuroscience and Cell Biology, University of Coimbra, Coimbra, Portugal.
Macedo-Ribeiro S; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal.
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Źródło:
Scientific reports [Sci Rep] 2015 Jan 26; Vol. 5, pp. 8026. Date of Electronic Publication: 2015 Jan 26.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Protein Structure, Quaternary*
Adenosine Triphosphate/*chemistry
Mycobacterium tuberculosis/*enzymology
Phosphotransferases (Alcohol Group Acceptor)/*chemistry
Glucosyltransferases/chemistry ; Glucosyltransferases/genetics ; Kinetics ; Metabolic Networks and Pathways ; Mycobacterium tuberculosis/genetics ; Phosphotransferases (Alcohol Group Acceptor)/genetics ; Phylogeny ; Protein Folding
Czasopismo naukowe

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