High-volume hybridoma sequencing on the NeuroMabSeq platform enables efficient generation of recombinant monoclonal antibodies and scFvs for neuroscience research.
Autorzy:
Mitchell KG; Department of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA.; Bioinformatics Core, Genome Center, University of California Davis, Davis, CA, USA. Gong B; Department of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA. HunterSS; Bioinformatics Core, Genome Center, University of California Davis, Davis, CA, USA. Burkart-Waco D; DNA Technology Core, Genome Center, University of California Davis, Davis, CA, USA. Gavira-O'Neill CE; Department of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA. Templeton KM; Department of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA. Goethel ME; Department of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA. Bzymek M; Department of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA. MacNiven LM; Department of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA. Murray KD; Department of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA.; Department of Psychiatry and Behavioral Sciences, University of California Davis School of Medicine, Davis, Davis, CA, USA. Settles ML; Bioinformatics Core, Genome Center, University of California Davis, Davis, CA, USA. Froenicke L; DNA Technology Core, Genome Center, University of California Davis, Davis, CA, USA. Trimmer JS; Department of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA. .
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Źródło:
Scientific reports [Sci Rep] 2023 Sep 27; Vol. 13 (1), pp. 16200. Date of Electronic Publication: 2023 Sep 27.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
Sex disparate gut microbiome and metabolome perturbations precede disease progression in a mouse model of Rett syndrome.
Autorzy:
Neier K; UC Davis School of Medicine, Department of Medical Microbiology and Immunology, Genome Center, MIND Institute, Davis, CA, USA. Grant TE; UC Davis School of Medicine, Department of Medical Microbiology and Immunology, Genome Center, MIND Institute, Davis, CA, USA. Palmer RL; UC Davis School of Medicine, Department of Medical Microbiology and Immunology, Genome Center, MIND Institute, Davis, CA, USA. Chappell D; UC Davis School of Medicine, Department of Medical Microbiology and Immunology, Genome Center, MIND Institute, Davis, CA, USA. Hakam SM; UC Davis School of Medicine, Department of Medical Microbiology and Immunology, Genome Center, MIND Institute, Davis, CA, USA. Yasui KM; Oregon State University, Corvallis, OR, USA. Rolston M; UC Davis School of Medicine, Department of Medical Microbiology and Immunology, Genome Center, MIND Institute, Davis, CA, USA. Settles ML; UC Davis Genome Center, Davis, CA, USA. HunterSS; UC Davis Genome Center, Davis, CA, USA. Madany A; UC Davis School of Medicine, Department of Medical Microbiology and Immunology, Genome Center, MIND Institute, Davis, CA, USA. Ashwood P; UC Davis School of Medicine, Department of Medical Microbiology and Immunology, Genome Center, MIND Institute, Davis, CA, USA. Durbin-Johnson B; UC Davis Genome Center, Davis, CA, USA.; UC Davis School of Medicine, Department of Public Health Sciences, Davis, CA, USA. LaSalle JM; UC Davis School of Medicine, Department of Medical Microbiology and Immunology, Genome Center, MIND Institute, Davis, CA, USA. .; UC Davis Genome Center, Davis, CA, USA. . Yasui DH; UC Davis School of Medicine, Department of Medical Microbiology and Immunology, Genome Center, MIND Institute, Davis, CA, USA.
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Źródło:
Communications biology [Commun Biol] 2021 Dec 16; Vol. 4 (1), pp. 1408. Date of Electronic Publication: 2021 Dec 16.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
Establishment of quantitative RNAi-based forward genetics in Entamoeba histolytica and identification of genes required for growth.
Autorzy:
Bettadapur A; Department of Microbiology and Molecular Genetics, University of California, Davis, California, United States of America. HunterSS; Genome Center, University of California, Davis, California, United States of America. Suleiman RL; Department of Microbiology and Molecular Genetics, University of California, Davis, California, United States of America. Ruyechan MC; Department of Microbiology and Molecular Genetics, University of California, Davis, California, United States of America. Huang W; Department of Microbiology and Molecular Genetics, University of California, Davis, California, United States of America. Barbieri CG; SeqMatic, LLC, Fremont, California, United States of America. Miller HW; Department of Microbiology and Molecular Genetics, University of California, Davis, California, United States of America. Tam TSY; Department of Microbiology and Molecular Genetics, University of California, Davis, California, United States of America. Settles ML; Genome Center, University of California, Davis, California, United States of America. Ralston KS; Department of Microbiology and Molecular Genetics, University of California, Davis, California, United States of America.
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Źródło:
PLoS pathogens [PLoS Pathog] 2021 Nov 29; Vol. 17 (11), pp. e1010088. Date of Electronic Publication: 2021 Nov 29 (Print Publication: 2021).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Diversification, Introgression, and Rampant Cytonuclear Discordance in Rocky Mountains Chipmunks (Sciuridae: Tamias).
Autorzy:
Sarver BAJ; Department of Biological Sciences, University of Idaho, Moscow, ID 83844, USA.; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow ID 83844, USA. Herrera ND; Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA. Sneddon D; Department of Biological Sciences, University of Idaho, Moscow, ID 83844, USA. HunterSS; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow ID 83844, USA.; UC-Davis Genome Center, Davis, CA 95616, USA. Settles ML; UC-Davis Genome Center, Davis, CA 95616, USA. Kronenberg Z; Pacific Biosciences, Menlo Park, CA 94025, USA. Demboski JR; Department of Zoology, Denver Museum of Nature & Sciences, Denver, CO 80205, USA. Good JM; Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA.; Wildlife Biology Program, University of Montana, Missoula, Montana 59812, USA. Sullivan J; Department of Biological Sciences, University of Idaho, Moscow, ID 83844, USA.; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow ID 83844, USA.
A new mouse SNP genotyping assay for speed congenics: combining flexibility, affordability, and power.
Autorzy:
Andrews KR; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow, ID, 83844, USA. . HunterSS; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow, ID, 83844, USA. Torrevillas BK; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA. Céspedes N; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA. Garrison SM; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA. Strickland J; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA. Wagers D; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA. Hansten G; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA. New DD; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow, ID, 83844, USA. Fagnan MW; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow, ID, 83844, USA. Luckhart S; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA. .; Department of Biological Sciences, University of Idaho, Moscow, ID, 83844, USA. .
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BMC genomics [BMC Genomics] 2021 May 24; Vol. 22 (1), pp. 378. Date of Electronic Publication: 2021 May 24.
The Species-Specific Acquisition and Diversification of a K1-like Family of Killer Toxins in Budding Yeasts of the Saccharomycotina.
Autorzy:
Fredericks LR; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. Lee MD; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. Crabtree AM; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. Boyer JM; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. Kizer EA; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. Taggart NT; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. Roslund CR; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. HunterSS; iBEST Genomics Core, University of Idaho, Moscow, Idaho, United States of America. Kennedy CB; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. Willmore CG; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. Tebbe NM; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. Harris JS; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. Brocke SN; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. Rowley PA; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.
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Źródło:
PLoS genetics [PLoS Genet] 2021 Feb 04; Vol. 17 (2), pp. e1009341. Date of Electronic Publication: 2021 Feb 04 (Print Publication: 2021).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
Wireworm (Coleoptera: Elateridae) genomic analysis reveals putative cryptic species, population structure, and adaptation to pest control.
Autorzy:
Andrews KR; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow, ID, 83844, USA. . Gerritsen A; Computational Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA. Rashed A; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA. Crowder DW; Department of Entomology, Washington State University, Pullman, WA, 99164, USA. Rondon SI; Oregon State University, Hermiston Agricultural Research and Extension Center, Hermiston, OR, 97838, USA. van Herk WG; Agassiz Research and Development Centre, Agriculture and Agri-Food Canada, Agassiz, British Columbia, Canada, V0M 1A0. Vernon R; Sentinel IPM Services, Chilliwack, British Columbia, Canada, V2R 3B5. Wanner KW; Department of Plant Sciences and Plant Pathology, Montana State University, Bozeman, MT, 59717, USA. Wilson CM; Idaho Wheat Commission, Boise, ID, 83702, USA. New DD; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow, ID, 83844, USA. Fagnan MW; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow, ID, 83844, USA. Hohenlohe PA; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow, ID, 83844, USA. HunterSS; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow, ID, 83844, USA.
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Źródło:
Communications biology [Commun Biol] 2020 Sep 07; Vol. 3 (1), pp. 489. Date of Electronic Publication: 2020 Sep 07.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
Regeneration associated transcriptional signature of retinal microglia and macrophages.
Autorzy:
Mitchell DM; Department of Biological Sciences, University of Idaho, Moscow, ID, 83844, USA. . Sun C; Department of Biological Sciences, University of Idaho, Moscow, ID, 83844, USA.; Ophthalmology, Washington University in St. Louis, 4523 Clayton Ave St. Louis, Missouri, 63110, USA. HunterSS; Institute for Bioinformatics and Evolutionary Studies, University of Idaho, Moscow, ID, 83844, USA. New DD; Institute for Bioinformatics and Evolutionary Studies, University of Idaho, Moscow, ID, 83844, USA. Stenkamp DL; Department of Biological Sciences, University of Idaho, Moscow, ID, 83844, USA.
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Źródło:
Scientific reports [Sci Rep] 2019 Mar 18; Vol. 9 (1), pp. 4768. Date of Electronic Publication: 2019 Mar 18.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
A Rapid Method for Sequencing Double-Stranded RNAs Purified from Yeasts and the Identification of a Potent K1 Killer Toxin Isolated from Saccharomyces cerevisiae .
Autorzy:
Crabtree AM; Department of Biological Sciences, University of Idaho, Moscow, ID 83844, USA. . Kizer EA; Department of Biological Sciences, University of Idaho, Moscow, ID 83844, USA. . HunterSS; IBEST Genomics Core, University of Idaho, Moscow, ID 83843, USA. . Van Leuven JT; Department of Biological Sciences, University of Idaho, Moscow, ID 83844, USA. . New DD; IBEST Genomics Core, University of Idaho, Moscow, ID 83843, USA. . Fagnan MW; IBEST Genomics Core, University of Idaho, Moscow, ID 83843, USA. . Rowley PA; Department of Biological Sciences, University of Idaho, Moscow, ID 83844, USA. .
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Źródło:
Viruses [Viruses] 2019 Jan 16; Vol. 11 (1). Date of Electronic Publication: 2019 Jan 16.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
Retinoic Acid Signaling Regulates Differential Expression of the Tandemly-Duplicated Long Wavelength-Sensitive Cone Opsin Genes in Zebrafish.
Autorzy:
Mitchell DM; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. Stevens CB; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. Frey RA; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America. HunterSS; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America; Bioinformatics and Computational Biology Graduate Program, University of Idaho, Moscow, Idaho, United States of America. Ashino R; Department of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba, Japan. Kawamura S; Department of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba, Japan. Stenkamp DL; Department of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America; Bioinformatics and Computational Biology Graduate Program, University of Idaho, Moscow, Idaho, United States of America; Neuroscience Graduate Program, University of Idaho, Moscow, Idaho, United States of America.
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Źródło:
PLoS genetics [PLoS Genet] 2015 Aug 21; Vol. 11 (8), pp. e1005483. Date of Electronic Publication: 2015 Aug 21 (Print Publication: 2015).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
Predictors of disease recurrence post living donor liver transplantation in end stage chronic HCV patients.
Autorzy:
El Awady MK; Department of Microbial Biotechnology, National Research Center, Dokki, Cairo, 12622, Egypt. Bader El Din NG; Department of Microbial Biotechnology, National Research Center, Dokki, Cairo, 12622, Egypt. Abdel Aziz Riad M; El Sahel Teaching Hospital, Ministry of Health, Al Kornich Shoubra, Cairo, Egypt. Omran MH; Department of Microbial Biotechnology, National Research Center, Dokki, Cairo, 12622, Egypt. Abdelhafez TH; Department of Microbial Biotechnology, National Research Center, Dokki, Cairo, 12622, Egypt. Elbaz TM; Department of Tropical Medicine, Kasr El Aini, Cairo University, Cairo, Egypt. HunterSS; Department of Tropical Medicine, Kasr El Aini, Cairo University, Cairo, Egypt. Dawood RM; Department of Microbial Biotechnology, National Research Center, Dokki, Cairo, 12622, Egypt. Abdel Aziz AO; Department of Tropical Medicine, Kasr El Aini, Cairo University, Cairo, Egypt.
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Źródło:
Disease markers [Dis Markers] 2014; Vol. 2014, pp. 202548. Date of Electronic Publication: 2014 Feb 18.
Comparative genome analysis of an avirulent and two virulent strains of avian Pasteurella multocida reveals candidate genes involved in fitness and pathogenicity.
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