Temat: "Segmental Duplications, Genomic" - OpacWWW

Skocz do pozycji: 1.

Tytuł:: High level of complexity and global diversity of the 3q29 locus revealed by optical mapping and long-read sequencing.
Autorzy:: Yilmaz F; The Jackson Laboratory for Genomic Medicine, 10 Discovery Drive, Farmington, CT, 06032, USA.
Gurusamy U; Cardiovascular Research Institute and Institute for Human Genetics, UCSF School of Medicine, 513 Parnassus Ave, San Francisco, CA, 94143, USA.
Mosley TJ; Graduate Program in Genetics and Molecular Biology, Laney Graduate School, Emory University, 201 Dowman Drive, Atlanta, GA, 30322, USA.
Hallast P; The Jackson Laboratory for Genomic Medicine, 10 Discovery Drive, Farmington, CT, 06032, USA.
Kim K; The Jackson Laboratory for Genomic Medicine, 10 Discovery Drive, Farmington, CT, 06032, USA.
Mostovoy Y; Cardiovascular Research Institute and Institute for Human Genetics, UCSF School of Medicine, 513 Parnassus Ave, San Francisco, CA, 94143, USA.
Purcell RH; Laboratory of Translational Cell Biology, Department of Cell Biology, Emory University School of Medicine, 100 Woodruff Circle, Atlanta, GA, 30322, USA.
Shaikh TH; Department of Pediatrics, Section of Genetics and Metabolism, University of Colorado School of Medicine, 13123 E 16Th Ave, Aurora, CO, 80045, USA.
Zwick ME; Department of Genetics, Rutgers University-New Brunswick, Rutgers University, Piscataway, New Brunswick, NJ, 08901, USA.
Kwok PY; Cardiovascular Research Institute and Institute for Human Genetics, UCSF School of Medicine, 513 Parnassus Ave, San Francisco, CA, 94143, USA.; Department of Dermatology, UCSF School of Medicine, 1701 Divisadero Street, San Francisco, CA, 94115, USA.
Lee C; The Jackson Laboratory for Genomic Medicine, 10 Discovery Drive, Farmington, CT, 06032, USA. .
Mulle JG; Department of Psychiatry, Robert Wood Johnson Medical School, Rutgers Biomedical and Health Sciences, Rutgers University, 671 Hoes Lane, New Brunswick, NJ, 08901, USA. .; Pokaż więcej
Źródło:: Genome medicine [Genome Med] 2023 May 10; Vol. 15 (1), pp. 35. Date of Electronic Publication: 2023 May 10.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Segmental Duplications, Genomic*
Genomics*
Humans ; Chromosome Mapping ; Syndrome ; Haplotypes ; DNA Copy Number Variations

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Skocz do pozycji: 2.

Tytuł:: The de novo assembly of a European wild boar genome revealed unique patterns of chromosomal structural variations and segmental duplications.
Autorzy:: Chen J; Institutes for Systems Genetics, Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu, China.
Zhong J; Institutes for Systems Genetics, Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu, China.
He X; Institutes for Systems Genetics, Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu, China.
Li X; Institutes for Systems Genetics, Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu, China.
Ni P; Animal Husbandry and Veterinary Institute of Keqiao District, Shaoxing, Zhejiang, China.
Safner T; Faculty of Agriculture, University of Zagreb, Zagreb, Croatia.; Centre of Excellence for Biodiversity and Molecular Plant Breeding, (CoE CroP-BioDiv), Zagreb, Croatia.
Šprem N; Faculty of Agriculture, University of Zagreb, Zagreb, Croatia.
Han J; International Livestock Research Institute, Nairobi, Kenya.; CAAS-ILRI Joint Laboratory on Livestock and Forage Genetic Resources, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.; Pokaż więcej
Źródło:: Animal genetics [Anim Genet] 2022 Jun; Vol. 53 (3), pp. 281-292. Date of Electronic Publication: 2022 Mar 02.
Typ publikacji:: Journal Article
MeSH Terms:: Segmental Duplications, Genomic*
Sperm Motility*
Animals ; Chromosomes ; Genome ; Male ; Sus scrofa/genetics ; Swine/genetics

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Skocz do pozycji: 3.

Tytuł:: Structural Variation Evolution at the 15q11-q13 Disease-Associated Locus.
Autorzy:: Paparella A; Department of Biosciences, Biotechnology and Environment, University of Bari 'Aldo Moro', 70125 Bari, Italy.
L'Abbate A; Institute of Biomembranes, Bioenergetics, and Molecular Biotechnology (IBIOM), 70125 Bari, Italy.
Palmisano D; Department of Biosciences, Biotechnology and Environment, University of Bari 'Aldo Moro', 70125 Bari, Italy.
Chirico G; Department of Biosciences, Biotechnology and Environment, University of Bari 'Aldo Moro', 70125 Bari, Italy.
Porubsky D; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA 98195, USA.
Catacchio CR; Department of Biosciences, Biotechnology and Environment, University of Bari 'Aldo Moro', 70125 Bari, Italy.
Ventura M; Department of Biosciences, Biotechnology and Environment, University of Bari 'Aldo Moro', 70125 Bari, Italy.
Eichler EE; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA 98195, USA.; Howard Hughes Medical Institute (HHMI), University of Washington, Seattle, WA 98195, USA.
Maggiolini FAM; Department of Biosciences, Biotechnology and Environment, University of Bari 'Aldo Moro', 70125 Bari, Italy.; Research Centre for Viticulture and Enology, Council for Agricultural Research and Economics (CREA), 70010 Bari, Italy.
Antonacci F; Department of Biosciences, Biotechnology and Environment, University of Bari 'Aldo Moro', 70125 Bari, Italy.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2023 Oct 31; Vol. 24 (21). Date of Electronic Publication: 2023 Oct 31.
Typ publikacji:: Journal Article
MeSH Terms:: Prader-Willi Syndrome*/genetics
Autistic Disorder*/genetics
Animals ; Humans ; DNA Copy Number Variations/genetics ; Primates/genetics ; Segmental Duplications, Genomic/genetics ; Chromosomes, Human, Pair 15/genetics ; Gene Duplication

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Skocz do pozycji: 4.

Tytuł:: Segmental duplications and their variation in a complete human genome.
Autorzy:: Vollger MR; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Guitart X; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Dishuck PC; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Mercuri L; Department of Biology, University of Bari, Aldo Moro, Bari 70125, Italy.
Harvey WT; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Gershman A; Department of Molecular Biology and Genetics, Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Diekhans M; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.
Sulovari A; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Munson KM; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Lewis AP; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Hoekzema K; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Porubsky D; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Li R; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Nurk S; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Koren S; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Miga KH; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.
Phillippy AM; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Timp W; Department of Molecular Biology and Genetics, Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Ventura M; Department of Biology, University of Bari, Aldo Moro, Bari 70125, Italy.
Eichler EE; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.; Howard Hughes Medical Institute, University of Washington, Seattle, WA, USA.; Pokaż więcej
Źródło:: Science (New York, N.Y.) [Science] 2022 Apr; Vol. 376 (6588), pp. eabj6965. Date of Electronic Publication: 2022 Apr 01.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:: DNA Copy Number Variations*
Gene Duplication*
Genome, Human*
Segmental Duplications, Genomic*
Evolution, Molecular ; GTPase-Activating Proteins/genetics ; Humans ; Polymorphism, Single Nucleotide ; Proto-Oncogene Proteins/genetics

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Skocz do pozycji: 5.

Tytuł:: Modelling segmental duplications in the human genome.
Autorzy:: Abdullaev ET; Department of Computational Molecular Biology, Max Planck Institute for Molecular Genetics, Ihnestraße 63/73, Berlin, 14195, Germany. .
Umarova IR; Faculty of Computational Mathematics and Cybernetics, Moscow State University, Leninskiye Gory 1-52, Moscow, 119991, Russia.
Arndt PF; Department of Computational Molecular Biology, Max Planck Institute for Molecular Genetics, Ihnestraße 63/73, Berlin, 14195, Germany.; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2021 Jul 02; Vol. 22 (1), pp. 496. Date of Electronic Publication: 2021 Jul 02.
Typ publikacji:: Journal Article
MeSH Terms:: Genome, Human*
Segmental Duplications, Genomic*
Animals ; Evolution, Molecular ; Gene Duplication ; Genomics ; Humans

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Skocz do pozycji: 6.

Tytuł:: Possible biased virulence attenuation in the Senegal strain of Ehrlichia ruminantium by ntrX gene conversion from an inverted segmental duplication.
Autorzy:: Gordon JL; CIRAD, UMR ASTRE, Petit-Bourg, Guadeloupe, France.; ASTRE, CIRAD, INRAe, Univ Montpellier, Montpellier, France.
Oliva Chavez AS; CIRAD, UMR ASTRE, Petit-Bourg, Guadeloupe, France.; ASTRE, CIRAD, INRAe, Univ Montpellier, Montpellier, France.
Martinez D; CIRAD, F-97130, Capesterre-Belle-Eau, Guadeloupe, France.
Vachiery N; ASTRE, CIRAD, INRAe, Univ Montpellier, Montpellier, France.
Meyer DF; CIRAD, UMR ASTRE, Petit-Bourg, Guadeloupe, France.; ASTRE, CIRAD, INRAe, Univ Montpellier, Montpellier, France.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2023 Feb 17; Vol. 18 (2), pp. e0266234. Date of Electronic Publication: 2023 Feb 17 (Print Publication: 2023).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Ehrlichia ruminantium*/genetics
Animals ; Gene Conversion ; Senegal ; Virulence/genetics ; Segmental Duplications, Genomic ; Ruminants/genetics

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Skocz do pozycji: 7.

Tytuł:: Circular DNA intermediates in the generation of large human segmental duplications.
Autorzy:: Chicote JU; Research Unit, Hospital Universitari de Tarragona Joan XXIII, Institut d'Investigació Sanitària Pere Virgili, Universitat Rovira i Virgili, 43005, Tarragona, Spain.
López-Sánchez M; Genetics Unit, Departament de Ciències Experimentals i de la Salut, Universitat Pompeu Fabra, 08003, Barcelona, Spain.; Hospital del Mar Research Institute (IMIM) and Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), 08003, Barcelona, Spain.
Marquès-Bonet T; Institut de Biologia Evolutiva (CSIC-UPF), Departament de Ciències Experimentals i de la Salut, Universitat Pompeu Fabra, 08003, Barcelona, Spain.; Catalan Institution of Research and Advanced Studies (ICREA), 08010, Barcelona, Spain.; CNAG-CRG, Centre for Genomic Regulation, Barcelona Institute of Science and Technology (BIST), 08028, Barcelona, Spain.
Callizo J; Department of Ophthalmology, Hospital Universitari de Tarragona Joan XXIII, Institut d'Investigació Sanitària Pere Virgili, Universitat Rovira i Virgili, 43005, Tarragona, Spain.
Pérez-Jurado LA; Genetics Unit, Departament de Ciències Experimentals i de la Salut, Universitat Pompeu Fabra, 08003, Barcelona, Spain. .; Hospital del Mar Research Institute (IMIM) and Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), 08003, Barcelona, Spain. .; SA Clinical Genetics, Women's and Children's Hospital, South Australian Health and Medical Research Institute (SAHMRI) & University of Adelaide, Adelaide, SA, 5000, Australia. .
García-España A; Research Unit, Hospital Universitari de Tarragona Joan XXIII, Institut d'Investigació Sanitària Pere Virgili, Universitat Rovira i Virgili, 43005, Tarragona, Spain. .; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2020 Aug 26; Vol. 21 (1), pp. 593. Date of Electronic Publication: 2020 Aug 26.
Typ publikacji:: Journal Article
MeSH Terms:: DNA, Circular*/genetics
Segmental Duplications, Genomic*
Gene Duplication ; Genome ; Genome, Human ; Humans

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Skocz do pozycji: 8.

Tytuł:: A Tale of Two Families: Whole Genome and Segmental Duplications Underlie Glutamine Synthetase and Phosphoenolpyruvate Carboxylase Diversity in Narrow-Leafed Lupin ( Lupinus angustifolius L.).
Autorzy:: Czyż KB; Department of Biometry and Bioinformatics, Institute of Plant Genetics, Polish Academy of Sciences, 60-479 Poznan, Poland.
Książkiewicz M; Department of Genomics, Institute of Plant Genetics, Polish Academy of Sciences, 60-479 Poznan, Poland.
Koczyk G; Department of Biometry and Bioinformatics, Institute of Plant Genetics, Polish Academy of Sciences, 60-479 Poznan, Poland.
Szczepaniak A; Department of Genomics, Institute of Plant Genetics, Polish Academy of Sciences, 60-479 Poznan, Poland.
Podkowiński J; Department of Genomics, Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznan, Poland.
Naganowska B; Department of Genomics, Institute of Plant Genetics, Polish Academy of Sciences, 60-479 Poznan, Poland.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2020 Apr 08; Vol. 21 (7). Date of Electronic Publication: 2020 Apr 08.
Typ publikacji:: Journal Article
MeSH Terms:: Genome, Plant*
Segmental Duplications, Genomic*
Glutamate-Ammonia Ligase/*genetics
Lupinus/*genetics
Phosphoenolpyruvate Carboxylase/*genetics
Evolution, Molecular ; Lupinus/metabolism ; Nitrogen/metabolism ; Sequence Analysis, DNA ; Synteny

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Skocz do pozycji: 9.

Tytuł:: Genomic inversions and GOLGA core duplicons underlie disease instability at the 15q25 locus.
Autorzy:: Maggiolini FAM; Dipartimento di Biologia, Università degli Studi di Bari 'Aldo Moro', Bari, Italy.
Cantsilieris S; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, United States of America.
D'Addabbo P; Dipartimento di Biologia, Università degli Studi di Bari 'Aldo Moro', Bari, Italy.
Manganelli M; Dipartimento di Biologia, Università degli Studi di Bari 'Aldo Moro', Bari, Italy.
Coe BP; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, United States of America.
Dumont BL; The Jackson Laboratory, Bar Harbor, ME, United States of America.
Sanders AD; European Molecular Biology Laboratory (EMBL), Genome Biology Unit, Meyerhofstraße 1, Heidelberg, Germany.
Pang AWC; Bionano Genomics, San Diego, CA, United States of America.
Vollger MR; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, United States of America.
Palumbo O; Medical Genetics Unit, IRCCS Casa Sollievo della Sofferenza, San Giovanni Rotondo (FG), Italy.
Palumbo P; Medical Genetics Unit, IRCCS Casa Sollievo della Sofferenza, San Giovanni Rotondo (FG), Italy.
Accadia M; Medical Genetics Service, Hospital 'Cardinale G. Panico', Via San Pio X n°4, Tricase, LE, Italy.
Carella M; Medical Genetics Unit, IRCCS Casa Sollievo della Sofferenza, San Giovanni Rotondo (FG), Italy.
Eichler EE; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, United States of America.; Howard Hughes Medical Institute, University of Washington, Seattle, WA, United States of America.
Antonacci F; Dipartimento di Biologia, Università degli Studi di Bari 'Aldo Moro', Bari, Italy.; Pokaż więcej
Źródło:: PLoS genetics [PLoS Genet] 2019 Mar 27; Vol. 15 (3), pp. e1008075. Date of Electronic Publication: 2019 Mar 27 (Print Publication: 2019).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Chromosome Inversion*
Segmental Duplications, Genomic*
Chromosomes, Human, Pair 15/*genetics
Animals ; Autoantigens/genetics ; Chromosomal Instability ; Evolution, Molecular ; Gene Dosage ; Gene Rearrangement ; Genetic Variation ; Golgi Matrix Proteins/genetics ; Hominidae/genetics ; Humans ; Multigene Family ; Phylogeny ; Primates/genetics ; Recombination, Genetic ; Species Specificity

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Skocz do pozycji: 10.

Tytuł:: A new Aura virus isolate in Brazil shows segment duplication in the variable region of the nsP3 gene.
Autorzy:: Mosimann ALP; Laboratory of Molecular Virology, Instituto Carlos Chagas, FIOCRUZ, Rua Prof. Algacyr Munhoz Mader 3775, Cidade Industrial, Curitiba, PR, 81350-010, Brazil.
de Siqueira MK; Laboratory of Molecular Virology, Instituto Carlos Chagas, FIOCRUZ, Rua Prof. Algacyr Munhoz Mader 3775, Cidade Industrial, Curitiba, PR, 81350-010, Brazil.; Present Address: Department of Genetics, Evolution and Bioagents, Institute of Biology, University of Campinas, Campinas, SP, 13083-970, Brazil.
Ceole LF; Laboratory of Cell Biology, Instituto Carlos Chagas, FIOCRUZ, Rua Prof. Algacyr Munhoz Mader 3775, Cidade Industrial, Curitiba, PR, 81350-010, Brazil.
Nunes Duarte Dos Santos C; Laboratory of Molecular Virology, Instituto Carlos Chagas, FIOCRUZ, Rua Prof. Algacyr Munhoz Mader 3775, Cidade Industrial, Curitiba, PR, 81350-010, Brazil. .; Pokaż więcej
Źródło:: Parasites & vectors [Parasit Vectors] 2018 May 29; Vol. 11 (1), pp. 321. Date of Electronic Publication: 2018 May 29.
Typ publikacji:: Journal Article
MeSH Terms:: Segmental Duplications, Genomic*
Alphavirus/*genetics
Culicidae/*virology
Viral Nonstructural Proteins/*genetics
Alphavirus/classification ; Alphavirus/isolation & purification ; Alphavirus/ultrastructure ; Alphavirus Infections/transmission ; Alphavirus Infections/virology ; Animals ; Brazil ; Cell Line ; DNA, Complementary/genetics ; Microscopy, Electron, Transmission ; Phylogeny ; Real-Time Polymerase Chain Reaction
SCR Organism:: Aura virus

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Skocz do pozycji: 11.

Tytuł:: Towards the detection of copy number variation from single sperm sequencing in cattle.
Autorzy:: Yang L; Animal Genomics and Improvement Laboratory, Henry A. Wallace Beltsville Agricultural Research Center, Agricultural Research Service, USDA, Beltsville, MD, 20705, USA.; College of Animal Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China.
Gao Y; Animal Genomics and Improvement Laboratory, Henry A. Wallace Beltsville Agricultural Research Center, Agricultural Research Service, USDA, Beltsville, MD, 20705, USA.; Department of Animal and Avian Sciences, University of Maryland, College Park, MD, 20742, USA.
Oswalt A; Select Sires Inc, 11740 U.S. 42 North, Plain City, OH, 43064, USA.
Fang L; MRC Human Genetics Unit at the Institute of Genetics and Cancer, The University of Edinburgh, Edinburgh, EH4 2XU, UK.
Boschiero C; Animal Genomics and Improvement Laboratory, Henry A. Wallace Beltsville Agricultural Research Center, Agricultural Research Service, USDA, Beltsville, MD, 20705, USA.
Neupane M; Animal Genomics and Improvement Laboratory, Henry A. Wallace Beltsville Agricultural Research Center, Agricultural Research Service, USDA, Beltsville, MD, 20705, USA.
Sattler CG; Select Sires Inc, 11740 U.S. 42 North, Plain City, OH, 43064, USA.
Li CJ; Animal Genomics and Improvement Laboratory, Henry A. Wallace Beltsville Agricultural Research Center, Agricultural Research Service, USDA, Beltsville, MD, 20705, USA.
Seroussi E; Agricultural Research Organization (ARO), Institute of Animal Science, HaMaccabim Road, P.O.B 15159, 7528809, Volcani CenterRishon LeTsiyon, Israel.
Xu L; Innovation Team of Cattle Genetic Breeding, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Yang L; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction of Ministry of Education & College of Animal Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Li L; College of Animal Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China.
Zhang H; College of Animal Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China.
Rosen BD; Animal Genomics and Improvement Laboratory, Henry A. Wallace Beltsville Agricultural Research Center, Agricultural Research Service, USDA, Beltsville, MD, 20705, USA.
Van Tassell CP; Animal Genomics and Improvement Laboratory, Henry A. Wallace Beltsville Agricultural Research Center, Agricultural Research Service, USDA, Beltsville, MD, 20705, USA.
Zhou Y; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction of Ministry of Education & College of Animal Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Ma L; Department of Animal and Avian Sciences, University of Maryland, College Park, MD, 20742, USA. .
Liu GE; Animal Genomics and Improvement Laboratory, Henry A. Wallace Beltsville Agricultural Research Center, Agricultural Research Service, USDA, Beltsville, MD, 20705, USA. .; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2022 Mar 17; Vol. 23 (1), pp. 215. Date of Electronic Publication: 2022 Mar 17.
Typ publikacji:: Journal Article
MeSH Terms:: DNA Copy Number Variations*
Genome*
Animals ; Cattle/genetics ; Male ; Segmental Duplications, Genomic ; Sequence Analysis, DNA/methods ; Spermatozoa

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Skocz do pozycji: 12.

Tytuł:: Genome-Wide Identification and Characterization of Soybean GmLOR Gene Family and Expression Analysis in Response to Abiotic Stresses.
Autorzy:: Fang Y; Key laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan 430062, China.; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, No. 1 Shizishan Road, Hongshan District, Wuhan 430070, China.
Cao D; Key laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan 430062, China.
Yang H; Key laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan 430062, China.
Guo W; Key laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan 430062, China.
Ouyang W; Key laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan 430062, China.
Chen H; Key laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan 430062, China.
Shan Z; Key laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan 430062, China.
Yang Z; Key laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan 430062, China.
Chen S; Key laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan 430062, China.
Li X; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, No. 1 Shizishan Road, Hongshan District, Wuhan 430070, China.
Chen L; Key laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan 430062, China.
Zhou X; Key laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan 430062, China.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2021 Nov 19; Vol. 22 (22). Date of Electronic Publication: 2021 Nov 19.
Typ publikacji:: Journal Article
MeSH Terms:: Plant Proteins/*genetics
Glycine max/*genetics
Stress, Physiological/*genetics
Arabidopsis/genetics ; Droughts ; Gene Expression Regulation, Plant/genetics ; Genome, Plant/genetics ; Multigene Family/genetics ; Phylogeny ; Promoter Regions, Genetic/genetics ; Segmental Duplications, Genomic/genetics ; Glycine max/growth & development

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Skocz do pozycji: 13.

Tytuł:: Segmental duplications: evolution and impact among the current Lepidoptera genomes.
Autorzy:: Zhao Q; State Key Laboratory for Ecological Pest Control of Fujian/Taiwan Crops and College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.; Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.; Fujian-Taiwan Joint Centre for Ecological Control of Crop Pests, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.; Key Laboratory of Integrated Pest Management for Fujian-Taiwan Crops, Ministry of Agriculture, Fuzhou, 350002, China.
Ma D; State Key Laboratory for Ecological Pest Control of Fujian/Taiwan Crops and College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.; Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.; Fujian-Taiwan Joint Centre for Ecological Control of Crop Pests, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.; Key Laboratory of Integrated Pest Management for Fujian-Taiwan Crops, Ministry of Agriculture, Fuzhou, 350002, China.
Vasseur L; State Key Laboratory for Ecological Pest Control of Fujian/Taiwan Crops and College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.; Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.; Department of Biological Sciences, Brock University, 1812 Sir Isaac Brock Way, St. Catharines, ON, L2S 3A1, Canada.
You M; State Key Laboratory for Ecological Pest Control of Fujian/Taiwan Crops and College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. .; Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. .; Fujian-Taiwan Joint Centre for Ecological Control of Crop Pests, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. .; Key Laboratory of Integrated Pest Management for Fujian-Taiwan Crops, Ministry of Agriculture, Fuzhou, 350002, China. .; Pokaż więcej
Źródło:: BMC evolutionary biology [BMC Evol Biol] 2017 Jul 06; Vol. 17 (1), pp. 161. Date of Electronic Publication: 2017 Jul 06.
Typ publikacji:: Journal Article
MeSH Terms:: Evolution, Molecular*
Segmental Duplications, Genomic*
Lepidoptera/*genetics
Animals ; Biological Evolution ; Gene Duplication ; Genome ; Lepidoptera/classification ; Species Specificity

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Skocz do pozycji: 14.

Tytuł:: Characterization of genome-wide segmental duplications reveals a common genomic feature of association with immunity among domestic animals.
Autorzy:: Feng X; National Engineering Laboratory for Animal Breeding, Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China.
Jiang J; National Engineering Laboratory for Animal Breeding, Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China.
Padhi A; Department of Animal and Avian Sciences, University of Maryland, College Park, MD, 20740, USA.
Ning C; National Engineering Laboratory for Animal Breeding, Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China.
Fu J; National Engineering Laboratory for Animal Breeding, Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China.
Wang A; National Engineering Laboratory for Animal Breeding, Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China.
Mrode R; International Livestock Research Institute, Nairobi, Box 30709-00100, Kenya.
Liu JF; National Engineering Laboratory for Animal Breeding, Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China. .; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2017 Apr 12; Vol. 18 (1), pp. 293. Date of Electronic Publication: 2017 Apr 12.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Segmental Duplications, Genomic*
Animals, Domestic/*genetics
Animals, Domestic/*immunology
Chromosome Mapping/*methods
Animals ; Chickens ; Evolution, Molecular ; Glucuronosyltransferase/genetics ; Goats ; Horses ; Interferon-alpha/genetics ; Rabbits ; Sheep

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Skocz do pozycji: 15.

Tytuł:: Segmental duplications and evolutionary acquisition of UV damage response in the SPATA31 gene family of primates and humans.
Autorzy:: Bekpen C; Max-Planck Institute for Evolutionary Biology, August-Thienemann Strasse 2, 24306, Plön, Germany. .
Künzel S; Max-Planck Institute for Evolutionary Biology, August-Thienemann Strasse 2, 24306, Plön, Germany.
Xie C; Max-Planck Institute for Evolutionary Biology, August-Thienemann Strasse 2, 24306, Plön, Germany.
Eaaswarkhanth M; Department of Biological Sciences, State University of New York at Buffalo, Buffalo, 14260-1300, NY, USA.; Present address: Population Genomics and Genetic Epidemiology Unit, Dasman Diabetes Institute, P.O.Box 1180, Dasman, 15462, Kuwait.
Lin YL; Department of Biological Sciences, State University of New York at Buffalo, Buffalo, 14260-1300, NY, USA.
Gokcumen O; Department of Biological Sciences, State University of New York at Buffalo, Buffalo, 14260-1300, NY, USA.
Akdis CA; Swiss Institute of Allergy and Asthma Research (SIAF), Davos, CH-7270, Switzerland.
Tautz D; Max-Planck Institute for Evolutionary Biology, August-Thienemann Strasse 2, 24306, Plön, Germany. .; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2017 Mar 06; Vol. 18 (1), pp. 222. Date of Electronic Publication: 2017 Mar 06.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Evolution, Molecular*
Multigene Family*
Segmental Duplications, Genomic*
Ultraviolet Rays*
DNA Damage/*radiation effects
Primates/*genetics
Animals ; Chromosome Mapping ; DNA Copy Number Variations ; Gene Duplication ; Humans ; Phylogeny ; Protein Domains/genetics

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Skocz do pozycji: 16.

Tytuł:: Short tandem repeats, segmental duplications, gene deletion, and genomic instability in a rapidly diversified immune gene family.
Autorzy:: Oren M; The Department of Biological Sciences, George Washington University, Washington, DC, USA.
Barela Hudgell MA; The Department of Biological Sciences, George Washington University, Washington, DC, USA.
D'Allura B; The Department of Biological Sciences, George Washington University, Washington, DC, USA.; Present Address: Pennsylvania College of Optometry, Salus University, Elkins Park, PA, USA.
Agronin J; The Department of Biological Sciences, George Washington University, Washington, DC, USA.
Gross A; The Department of Biological Sciences, George Washington University, Washington, DC, USA.
Podini D; Department of Forensic Sciences, George Washington University, Washington, DC, USA.
Smith LC; The Department of Biological Sciences, George Washington University, Washington, DC, USA. .; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2016 Nov 09; Vol. 17 (1), pp. 900. Date of Electronic Publication: 2016 Nov 09.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Gene Deletion*
Genomic Instability*
Microsatellite Repeats*
Multigene Family*
Segmental Duplications, Genomic*
Immunity/*genetics
Alleles ; Animals ; Chromosomes, Artificial, Bacterial ; Gene Library ; Gene Order ; Genetic Association Studies ; Genetic Loci ; Strongylocentrotus purpuratus/genetics

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Skocz do pozycji: 17.

Tytuł:: The origin of chromosomal inversions as a source of segmental duplications in the Sophophora subgenus of Drosophila.
Autorzy:: Puerma E; Departament de Genètica, Microbiologia i Estadística, Facultat de Biologia and Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, Spain.
Orengo DJ; Departament de Genètica, Microbiologia i Estadística, Facultat de Biologia and Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, Spain.
Aguadé M; Departament de Genètica, Microbiologia i Estadística, Facultat de Biologia and Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, Spain.; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2016 Jul 29; Vol. 6, pp. 30715. Date of Electronic Publication: 2016 Jul 29.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Chromosome Inversion*
Segmental Duplications, Genomic*
Drosophila/*genetics
Animals ; DNA Breaks, Double-Stranded ; DNA Repair ; Evolution, Molecular ; Gene Dosage ; Gene Order

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Skocz do pozycji: 18.

Tytuł:: Genetic dissection of down syndrome-associated alterations in APP/amyloid-β biology using mouse models.
Autorzy:: Tosh JL; Department of Neuromuscular Diseases, Queen Square Institute of Neurology, University College London, Queen Square, London, WC1N 3BG, UK.; The Francis Crick Institute, London, NW1 1AT, UK.
Rhymes ER; Department of Neuromuscular Diseases, Queen Square Institute of Neurology, University College London, Queen Square, London, WC1N 3BG, UK.
Mumford P; The UK Dementia Research Institute, University College London, Queen Square, London, WC1N 3BG, UK.
Whittaker HT; Department of Neuromuscular Diseases, Queen Square Institute of Neurology, University College London, Queen Square, London, WC1N 3BG, UK.
Pulford LJ; Department of Neuromuscular Diseases, Queen Square Institute of Neurology, University College London, Queen Square, London, WC1N 3BG, UK.
Noy SJ; Department of Neuromuscular Diseases, Queen Square Institute of Neurology, University College London, Queen Square, London, WC1N 3BG, UK.
Cleverley K; Department of Neuromuscular Diseases, Queen Square Institute of Neurology, University College London, Queen Square, London, WC1N 3BG, UK.
Walker MC; Department of Clinical and Experimental Epilepsy, Institute of Neurology, University College London, Queen Square, London, WC1N 3BG, UK.
Tybulewicz VLJ; The Francis Crick Institute, London, NW1 1AT, UK.; Department of Immunology and Inflammation, Imperial College, London, W12 0NN, UK.
Wykes RC; Department of Clinical and Experimental Epilepsy, Institute of Neurology, University College London, Queen Square, London, WC1N 3BG, UK.; Nanomedicine Lab and the Geoffrey Jefferson Brain Research Center, University of Manchester, Manchester, M13 9PT, UK.
Fisher EMC; Department of Neuromuscular Diseases, Queen Square Institute of Neurology, University College London, Queen Square, London, WC1N 3BG, UK. .
Wiseman FK; The UK Dementia Research Institute, University College London, Queen Square, London, WC1N 3BG, UK. .; Pokaż więcej
Corporate Authors:: LonDownS Consortium
Źródło:: Scientific reports [Sci Rep] 2021 Mar 11; Vol. 11 (1), pp. 5736. Date of Electronic Publication: 2021 Mar 11.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Amyloid beta-Peptides/*genetics
Amyloid beta-Protein Precursor/*genetics
Down Syndrome/*genetics
Alzheimer Disease/complications ; Alzheimer Disease/genetics ; Amyloid beta-Peptides/chemistry ; Animals ; Brain/pathology ; Chromosomes, Mammalian/genetics ; Disease Models, Animal ; Down Syndrome/complications ; Mice ; Mice, Transgenic ; Phenotype ; Phosphotransferases/metabolism ; Protein Aggregates ; Protein-Arginine N-Methyltransferases/metabolism ; Segmental Duplications, Genomic ; Seizures/complications ; Seizures/pathology ; Solubility ; Survival Analysis ; Transgenes

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Skocz do pozycji: 19.

Tytuł:: Distinct and sequential re-replication barriers ensure precise genome duplication.
Autorzy:: Zhou Y; Department of Biochemistry and Biophysics, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United State of America.
Pozo PN; Curriculum in Genetics and Molecular Biology, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United State of America.
Oh S; F. Widjaja Foundation Inflammatory Bowel and Immunobiology Research Institute and the Research Division of Immunology, Department of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, United State of America.
Stone HM; Department of Biochemistry and Biophysics, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United State of America.
Cook JG; Department of Biochemistry and Biophysics, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United State of America.; Curriculum in Genetics and Molecular Biology, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United State of America.; Lineberger Comprehensive Cancer, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United State of America.; Pokaż więcej
Źródło:: PLoS genetics [PLoS Genet] 2020 Aug 25; Vol. 16 (8), pp. e1008988. Date of Electronic Publication: 2020 Aug 25 (Print Publication: 2020).
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:: DNA Replication/*genetics
Genome, Human/*genetics
Replication Origin/*genetics
Segmental Duplications, Genomic/*genetics
CDC2 Protein Kinase/genetics ; Cell Cycle Proteins/genetics ; Cyclin A/genetics ; G2 Phase/genetics ; Geminin/genetics ; Genes, Duplicate/genetics ; HEK293 Cells ; Humans ; Minichromosome Maintenance Proteins/genetics ; Phosphorylation/genetics ; S Phase/genetics

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Skocz do pozycji: 20.

Tytuł:: Evolution and Expression of the Membrane Attack Complex and Perforin Gene Family in the Poaceae.
Autorzy:: Yu L; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
Liu D; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
Chen S; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
Dai Y; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
Guo W; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
Zhang X; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
Wang L; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
Ma S; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
Xiao M; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
Qi H; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
Xiao S; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
Chen Q; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2020 Aug 10; Vol. 21 (16). Date of Electronic Publication: 2020 Aug 10.
Typ publikacji:: Journal Article
MeSH Terms:: Evolution, Molecular*
Gene Expression*
Genes, Plant*
Complement Membrane Attack Complex/*genetics
Perforin/*genetics
Plant Proteins/*genetics
Poaceae/*genetics
Arabidopsis/genetics ; Chromosomes, Plant/genetics ; Crops, Agricultural/genetics ; Gene Duplication ; Gene Expression Regulation, Plant ; Phylogeny ; Plant Development/genetics ; Segmental Duplications, Genomic ; Stress, Physiological/genetics ; Synteny/genetics

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