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Wyszukujesz frazę ""Sheppard SK"" wg kryterium: Autor


Tytuł:
A high fidelity approach to assembling the complex Borrelia genome.
Autorzy:
Hepner S; German National Reference Centre for Borrelia, Oberschleissheim, Germany. .; Bavarian Health and Food Safety Authority, Oberschleissheim, Germany. .
Kuleshov K; Central Research Institute of Epidemiology, Moscow, Russia.
Tooming-Kunderud A; Department of Biosciences, Norwegian Sequencing Centre at Centre for Ecological and Evolutionary Synthesis, University of Oslo, Oslo, Norway.
Alig N; German National Reference Centre for Borrelia, Oberschleissheim, Germany.; Bavarian Health and Food Safety Authority, Oberschleissheim, Germany.
Gofton A; CSIRO, Health and Biosecurity, Canberra, ATC, Australia.
Casjens S; Division of Microbiology and Immunology, Pathology Department, University of Utah School of Medicine, Salt Lake City, UT, USA.
Rollins RE; Institute of Avian Research 'Vogelwarte Helgoland', Wilhelmshaven, Germany.
Dangel A; Bavarian Health and Food Safety Authority, Oberschleissheim, Germany.
Mourkas E; Department of Biology, University of Oxford, Oxford, UK.
Sheppard SK; Department of Biology, University of Oxford, Oxford, UK.
Wieser A; Medical Microbiology and Hospital Epidemiology, Max von Pettenkofer Institute, Faculty of Medicine, LMU Munich, Munich, Germany.; Division of Infectious Diseases and Tropical Medicine, LMU University Hospital, LMU Munich, Munich, Germany.; German Center for Infection Research (DZIF), partner site Munich, Munich, Germany.; Imunology, Infectious Disease and Pandemic Research IIP, Fraunhofer Institute for Translational Medicine and Pharmacology ITMP, Munich, Germany.
Hübner J; Dr. Von Hauner Children's Hospital, LMU Munich, Munich, Germany.
Sing A; German National Reference Centre for Borrelia, Oberschleissheim, Germany.; Bavarian Health and Food Safety Authority, Oberschleissheim, Germany.
Fingerle V; German National Reference Centre for Borrelia, Oberschleissheim, Germany.; Bavarian Health and Food Safety Authority, Oberschleissheim, Germany.
Margos G; German National Reference Centre for Borrelia, Oberschleissheim, Germany.; Bavarian Health and Food Safety Authority, Oberschleissheim, Germany.
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Źródło:
BMC genomics [BMC Genomics] 2023 Jul 17; Vol. 24 (1), pp. 401. Date of Electronic Publication: 2023 Jul 17.
Typ publikacji:
Journal Article
MeSH Terms:
Borrelia*/genetics
Borrelia burgdorferi*/genetics
Lyme Disease*/microbiology
Borrelia burgdorferi Group*/genetics
Humans ; Genome, Bacterial ; Phylogeny
Czasopismo naukowe
Tytuł:
Machine learning to predict the source of campylobacteriosis using whole genome data.
Autorzy:
Arning N; Big Data institute, Nuffield Department of Population Health, University of Oxford, Li Ka Shing Centre for Health Information and Discovery, Old Road Campus, Oxford, United Kingdom.
Sheppard SK; The Milner Centre of Evolution, Department of Biology & Biochemistry, University of Bath, Claverton Down, Bath, United Kingdom.
Bayliss S; The Milner Centre of Evolution, Department of Biology & Biochemistry, University of Bath, Claverton Down, Bath, United Kingdom.
Clifton DA; Department of Engineering Science, University of Oxford, Oxford, UK; Oxford-Suzhou Centre for Advanced Research, Suzhou, China.
Wilson DJ; Big Data institute, Nuffield Department of Population Health, University of Oxford, Li Ka Shing Centre for Health Information and Discovery, Old Road Campus, Oxford, United Kingdom.
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Źródło:
PLoS genetics [PLoS Genet] 2021 Oct 18; Vol. 17 (10), pp. e1009436. Date of Electronic Publication: 2021 Oct 18 (Print Publication: 2021).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Campylobacter Infections/*microbiology
Campylobacter jejuni/*genetics
Gastroenteritis/*microbiology
Animals ; Bayes Theorem ; Chickens/microbiology ; Genetics, Population/methods ; Humans ; Machine Learning ; Meat/microbiology ; Multilocus Sequence Typing/methods ; Whole Genome Sequencing/methods
Czasopismo naukowe
Tytuł:
Quantifying bacterial evolution in the wild: A birthday problem for Campylobacter lineages.
Autorzy:
Calland JK; The Milner Centre for Evolution, University of Bath, Bath, United Kingdom.
Pascoe B; The Milner Centre for Evolution, University of Bath, Bath, United Kingdom.
Bayliss SC; The Milner Centre for Evolution, University of Bath, Bath, United Kingdom.
Mourkas E; The Milner Centre for Evolution, University of Bath, Bath, United Kingdom.
Berthenet E; French National Reference Center for Campylobacters and Helicobacters, University of Bordeaux, Bordeaux, France.; Institute of Life Sciences, Swansea University Medical School, Swansea University, Singleton Park, Swansea, United Kingdom.
Thorpe HA; The Milner Centre for Evolution, University of Bath, Bath, United Kingdom.; Department of Biostatistics, University of Oslo, Oslo, Norway.
Hitchings MD; Institute of Life Sciences, Swansea University Medical School, Swansea University, Singleton Park, Swansea, United Kingdom.
Feil EJ; The Milner Centre for Evolution, University of Bath, Bath, United Kingdom.
Corander J; Department of Biostatistics, University of Oslo, Oslo, Norway.; Department of Mathematics and Statistics, Helsinki Institute for Information Technology, University of Helsinki, Helsinki, Finland.; Parasites and Microbes, Wellcome Sanger Institute, Cambridge, United Kingdom.
Blaser MJ; Center for Advanced Biotechnology and Medicine, Rutgers University, New Brunswick, New Jersey, United States of America.
Falush D; Centre for Microbes, Development and Health, Institute Pasteur of Shanghai, Shanghai, China.
Sheppard SK; The Milner Centre for Evolution, University of Bath, Bath, United Kingdom.; Department of Zoology, University of Oxford, Oxford, United Kingdom.
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Źródło:
PLoS genetics [PLoS Genet] 2021 Sep 28; Vol. 17 (9), pp. e1009829. Date of Electronic Publication: 2021 Sep 28 (Print Publication: 2021).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:
Evolution, Molecular*
Campylobacter/*genetics
Campylobacter/classification ; Genes, Bacterial ; Genetic Variation ; Phylogeny ; Species Specificity
Czasopismo naukowe
Tytuł:
Campylobacter jejuni genotypes are associated with post-infection irritable bowel syndrome in humans.
Autorzy:
Peters S; Department of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, USA.
Pascoe B; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Claverton Down, Bath, UK.
Wu Z; Department of Veterinary Microbiology and Preventive Medicine, Iowa State University, Ames, IA, USA.
Bayliss SC; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Claverton Down, Bath, UK.
Zeng X; Department of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, USA.
Edwinson A; Department of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, USA.
Veerabadhran-Gurunathan S; Department of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, USA.
Jawahir S; Minnesota Department of Health, St. Paul, MN, USA.
Calland JK; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Claverton Down, Bath, UK.
Mourkas E; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Claverton Down, Bath, UK.
Patel R; Division of Clinical Microbiology, Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA.
Wiens T; Division of Clinical Microbiology, Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA.
Decuir M; Division of Clinical Microbiology, Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA.
Boxrud D; Division of Clinical Microbiology, Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA.
Smith K; Division of Clinical Microbiology, Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA.
Parker CT; United States Department of Agriculture, Albany, CA, USA.
Farrugia G; Department of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, USA.
Zhang Q; Department of Veterinary Microbiology and Preventive Medicine, Iowa State University, Ames, IA, USA.
Sheppard SK; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Claverton Down, Bath, UK. s.k.sheppard@bath.ac.uk.
Grover M; Department of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, USA. .
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Źródło:
Communications biology [Commun Biol] 2021 Aug 30; Vol. 4 (1), pp. 1015. Date of Electronic Publication: 2021 Aug 30.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
Genotype*
Campylobacter Infections/*epidemiology
Campylobacter jejuni/*genetics
Campylobacter jejuni/*pathogenicity
Irritable Bowel Syndrome/*epidemiology
Adult ; Campylobacter Infections/microbiology ; Female ; Humans ; Irritable Bowel Syndrome/microbiology ; Male ; Middle Aged ; Risk Factors ; Virulence/genetics
Czasopismo naukowe
Tytuł:
Genome-wide association study of signature genetic alterations among pseudomonas aeruginosa cystic fibrosis isolates.
Autorzy:
Hwang W; Department of Microbiology and Immunology, Seoul, Republic of Korea.; Brain Korea 21 PLUS Project for Medical Sciences, Seoul, Republic of Korea.
Yong JH; Department of Microbiology and Immunology, Seoul, Republic of Korea.; Brain Korea 21 PLUS Project for Medical Sciences, Seoul, Republic of Korea.
Min KB; Department of Microbiology and Immunology, Seoul, Republic of Korea.; Brain Korea 21 PLUS Project for Medical Sciences, Seoul, Republic of Korea.
Lee KM; Department of Microbiology and Immunology, Seoul, Republic of Korea.; Brain Korea 21 PLUS Project for Medical Sciences, Seoul, Republic of Korea.
Pascoe B; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Claverton Down, Bath, United Kingdom.
Sheppard SK; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Claverton Down, Bath, United Kingdom.
Yoon SS; Department of Microbiology and Immunology, Seoul, Republic of Korea.; Brain Korea 21 PLUS Project for Medical Sciences, Seoul, Republic of Korea.; Institute for Immunology and Immunological Diseases, Seoul, Republic of Korea.; Severance Biomedical Science Institute, Yonsei University College of Medicine, Seoul, Republic of Korea.
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Źródło:
PLoS pathogens [PLoS Pathog] 2021 Jun 23; Vol. 17 (6), pp. e1009681. Date of Electronic Publication: 2021 Jun 23 (Print Publication: 2021).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Cystic Fibrosis/*microbiology
Pseudomonas Infections/*genetics
Pseudomonas aeruginosa/*genetics
Genetic Variation ; Genome-Wide Association Study ; Humans
Czasopismo naukowe
Tytuł:
Genomic epidemiology of Campylobacter jejuni associated with asymptomatic pediatric infection in the Peruvian Amazon.
Autorzy:
Pascoe B; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, United Kingdom.; Faculty of Associated Medical Sciences, Chiang Mai University, Chiang Mai, Thailand.
Schiaffino F; Department of International Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America.; Faculty of Veterinary Medicine, Universidad Peruana Cayetano Heredia, Lima, Peru.
Murray S; Swansea University Medical School, Swansea University, Singleton Park, Swansea, United Kingdom.; Department of Medical Biochemistry and Microbiology, Science for Life Laboratories, Uppsala University, Uppsala, Sweden.
Méric G; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, United Kingdom.
Bayliss SC; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, United Kingdom.
Hitchings MD; Swansea University Medical School, Swansea University, Singleton Park, Swansea, United Kingdom.
Mourkas E; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, United Kingdom.
Calland JK; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, United Kingdom.
Burga R; Bacteriology Department, Naval Medical Research Unit-6 (NAMRU-6), Iquitos, Peru.
Yori PP; The Division of Infectious Diseases and International Health, University of Virginia, Charlottesville, Virginia, United States of America.; Asociacion Benefica Prisma, Loreto, Peru.
Jolley KA; Department of Zoology, University of Oxford, South Parks Road, Oxford, United Kingdom.
Cooper KK; School of Animal and Comparative Biomedical Sciences, University of Arizona, Tucson, Arizona, United States of America.
Parker CT; Produce Safety and Microbiology Research Unit, Agricultural Research Service, US Department of Agriculture, Albany, California, United States of America.
Olortegui MP; Asociacion Benefica Prisma, Loreto, Peru.
Kosek MN; The Division of Infectious Diseases and International Health, University of Virginia, Charlottesville, Virginia, United States of America.; Asociacion Benefica Prisma, Loreto, Peru.
Sheppard SK; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, United Kingdom.; Faculty of Associated Medical Sciences, Chiang Mai University, Chiang Mai, Thailand.; Department of Zoology, University of Oxford, South Parks Road, Oxford, United Kingdom.
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Źródło:
PLoS neglected tropical diseases [PLoS Negl Trop Dis] 2020 Aug 10; Vol. 14 (8), pp. e0008533. Date of Electronic Publication: 2020 Aug 10 (Print Publication: 2020).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Asymptomatic Infections*
Campylobacter Infections/*epidemiology
Campylobacter Infections/*microbiology
Campylobacter jejuni/*genetics
Animals ; Campylobacter Infections/diagnosis ; Campylobacter Infections/physiopathology ; Campylobacter jejuni/classification ; Child, Preschool ; Cohort Studies ; Diarrhea/epidemiology ; Genomics ; Genotype ; Host-Parasite Interactions ; Humans ; Infant ; Infant, Newborn ; Longitudinal Studies ; Molecular Typing ; Multilocus Sequence Typing ; Peru/epidemiology ; Phylogeny ; Poultry/microbiology
Czasopismo naukowe
Tytuł:
PIRATE: A fast and scalable pangenomics toolbox for clustering diverged orthologues in bacteria.
Autorzy:
Bayliss SC; The Milner Centre for Evolution, Department of Biology and Biochemistry, Claverton Down, University of Bath, Bath BA2 7AY, UK.
Thorpe HA; The Milner Centre for Evolution, Department of Biology and Biochemistry, Claverton Down, University of Bath, Bath BA2 7AY, UK.
Coyle NM; The Milner Centre for Evolution, Department of Biology and Biochemistry, Claverton Down, University of Bath, Bath BA2 7AY, UK.
Sheppard SK; The Milner Centre for Evolution, Department of Biology and Biochemistry, Claverton Down, University of Bath, Bath BA2 7AY, UK.
Feil EJ; The Milner Centre for Evolution, Department of Biology and Biochemistry, Claverton Down, University of Bath, Bath BA2 7AY, UK.
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Źródło:
GigaScience [Gigascience] 2019 Oct 01; Vol. 8 (10).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Genome, Bacterial*
Genomics/*methods
Cluster Analysis
Czasopismo naukowe
Tytuł:
Source attribution of Campylobacter jejuni shows variable importance of chicken and ruminants reservoirs in non-invasive and invasive French clinical isolates.
Autorzy:
Berthenet E; French National Reference Center for Campylobacters & Helicobacters, Bordeaux, France.
Thépault A; Unit of Hygiene and Quality of Poultry & Pork Products, Laboratory of Ploufragan-Plouzané-Niort, French Agency for Food Environmental and Occupational Health & Safety (ANSES), Ploufragan, France.
Chemaly M; Unit of Hygiene and Quality of Poultry & Pork Products, Laboratory of Ploufragan-Plouzané-Niort, French Agency for Food Environmental and Occupational Health & Safety (ANSES), Ploufragan, France.
Rivoal K; Unit of Hygiene and Quality of Poultry & Pork Products, Laboratory of Ploufragan-Plouzané-Niort, French Agency for Food Environmental and Occupational Health & Safety (ANSES), Ploufragan, France.
Ducournau A; French National Reference Center for Campylobacters & Helicobacters, Bordeaux, France.
Buissonnière A; French National Reference Center for Campylobacters & Helicobacters, Bordeaux, France.
Bénéjat L; French National Reference Center for Campylobacters & Helicobacters, Bordeaux, France.
Bessède E; French National Reference Center for Campylobacters & Helicobacters, Bordeaux, France.; Univ. Bordeaux, INSERM, UMR1053 Bordeaux Research in Translational Oncology, BaRITOn, 33076, Bordeaux, France.
Mégraud F; French National Reference Center for Campylobacters & Helicobacters, Bordeaux, France.; Univ. Bordeaux, INSERM, UMR1053 Bordeaux Research in Translational Oncology, BaRITOn, 33076, Bordeaux, France.
Sheppard SK; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Claverton Down, Bath, United Kingdom.
Lehours P; French National Reference Center for Campylobacters & Helicobacters, Bordeaux, France. .; Univ. Bordeaux, INSERM, UMR1053 Bordeaux Research in Translational Oncology, BaRITOn, 33076, Bordeaux, France. .
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Źródło:
Scientific reports [Sci Rep] 2019 May 30; Vol. 9 (1), pp. 8098. Date of Electronic Publication: 2019 May 30.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Campylobacter Infections/*microbiology
Campylobacter jejuni/*isolation & purification
Chickens/*microbiology
Disease Reservoirs/*microbiology
Gastroenteritis/*microbiology
Ruminants/*microbiology
Animals ; Bacterial Typing Techniques ; Campylobacter Infections/epidemiology ; Campylobacter jejuni/genetics ; DNA, Bacterial/genetics ; DNA, Bacterial/isolation & purification ; DNA, Environmental/genetics ; DNA, Environmental/isolation & purification ; Datasets as Topic ; Epidemiological Monitoring/veterinary ; France/epidemiology ; Gastroenteritis/epidemiology ; Genetic Markers/genetics ; Genome, Bacterial/genetics ; Humans ; Molecular Epidemiology ; Multilocus Sequence Typing ; Whole Genome Sequencing
Czasopismo naukowe
Tytuł:
A GWAS on Helicobacter pylori strains points to genetic variants associated with gastric cancer risk.
Autorzy:
Berthenet E; Microbiology and Infectious Disease Group, Swansea University Medical School, Swansea University, Swansea, UK.
Yahara K; Antimicrobial Resistance Research Centre, National Institute of Infectious Diseases, Toyama, Japan.
Thorell K; Department of Microbiology, Tumour and Cell Biology, Karolinska Institutet, Stockholm, Sweden.
Pascoe B; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, UK.
Meric G; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, UK.
Mikhail JM; Microbiology and Infectious Disease Group, Swansea University Medical School, Swansea University, Swansea, UK.; School of Biosciences, College of Biomedical and Life Sciences, Cardiff University, Cardiff, CF10 3AX, UK.
Engstrand L; Department of Microbiology, Tumour and Cell Biology, Karolinska Institutet, Stockholm, Sweden.
Enroth H; Systems Biology Research Group, School of Biosciences, University of Skövde, Skövde, Sweden.
Burette A; Department of Gastroenterology, Centre Hospitalier Interrégional Edith Cavell/Site de la Basilique, Brussels, USA.
Megraud F; Laboratoire de Bactériologie, Centre National de Référence des Campylobacters et des Hélicobacters, Place Amélie Raba Léon, 33076, Bordeaux, France.; INSERM, University Bordeaux, UMR1053 Bordeaux Research In Translational Oncology, BaRITOn, 33000, Bordeaux, France.
Varon C; INSERM, University Bordeaux, UMR1053 Bordeaux Research In Translational Oncology, BaRITOn, 33000, Bordeaux, France.
Atherton JC; Nottingham Digestive Diseases Centre and National Institute for Health Research (NIHR) Nottingham Biomedical Research Centre, Nottingham University Hospitals NHS Trust and University of Nottingham, Nottingham, UK.
Smith S; Department of Clinical Medicine, School of Medicine, Trinity College Dublin, Dublin 2, Ireland.
Wilkinson TS; Microbiology and Infectious Disease Group, Swansea University Medical School, Swansea University, Swansea, UK.
Hitchings MD; Microbiology and Infectious Disease Group, Swansea University Medical School, Swansea University, Swansea, UK.
Falush D; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, UK. .
Sheppard SK; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, UK. S.K.Sheppard@bath.ac.uk.
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Źródło:
BMC biology [BMC Biol] 2018 Aug 02; Vol. 16 (1), pp. 84. Date of Electronic Publication: 2018 Aug 02.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Genetic Variation*
Genome, Bacterial*
Genome-Wide Association Study*
Helicobacter pylori/*genetics
Stomach Neoplasms/*microbiology
Gastritis/etiology ; Humans ; Metaplasia/etiology ; Polymorphism, Single Nucleotide ; Risk ; Stomach Neoplasms/epidemiology ; Virulence Factors/genetics
Czasopismo naukowe
Tytuł:
Piggy: a rapid, large-scale pan-genome analysis tool for intergenic regions in bacteria.
Autorzy:
Thorpe HA; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath BA2 7AY.
Bayliss SC; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath BA2 7AY.
Sheppard SK; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath BA2 7AY.
Feil EJ; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath BA2 7AY.
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Źródło:
GigaScience [Gigascience] 2018 Apr 01; Vol. 7 (4), pp. 1-11.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Genome, Bacterial*
Escherichia coli/*genetics
Genomics/*methods
Staphylococcus aureus/*genetics
DNA, Intergenic
Czasopismo naukowe
Tytuł:
Correction: Rapid evolution of distinct Helicobacter pylori subpopulations in the Americas.
Autorzy:
Thorell K
Yahara K
Berthenet E
Lawson DJ
Mikhail J
Kato I
Mendez A
Rizzato C
Bravo MM
Suzuki R
Yamaoka Y
Torres J
Sheppard SK
Falush D
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Źródło:
PLoS genetics [PLoS Genet] 2017 Apr 14; Vol. 13 (4), pp. e1006730. Date of Electronic Publication: 2017 Apr 14 (Print Publication: 2017).
Typ publikacji:
Published Erratum
Tytuł:
Rapid evolution of distinct Helicobacter pylori subpopulations in the Americas.
Autorzy:
Thorell K; Microbiology, Tumour and Cell Biology, Karolinska Institutet, Stockholm, Sweden.
Yahara K; Dept. of Bacteriology II, National Institute of Infectious Diseases, Tokyo, Japan.
Berthenet E; Medical Microbiology and Infectious Disease group, Swansea University, Swansea, Wales, United Kingdom.
Lawson DJ; Integrative Epidemiology Unit, School of Social and Community Medicine, University of Bristol, Bristol, United Kingdom.
Mikhail J; Medical Microbiology and Infectious Disease group, Swansea University, Swansea, Wales, United Kingdom.
Kato I; Karmanos Cancer Institute, Wayne State University, Detroit, Michigan, United States of America.
Mendez A; Instituto Politecnico Nacional, ENCB, Mexico City, Mexico.
Rizzato C; Dipartimento di Ricerca Traslazionale e Nuove Tecnologie in Medicina e Chirurgia, Universitá di Pisa, Pisa, Italy.
Bravo MM; Grupo de Investigación en Biología del Cáncer, Instituto Nacional de Cancerología, Bogota, Colombia.
Suzuki R; Dept. of Environmental and Preventive Medicine, Oita University Faculty of Medicine, Oita, Japan.
Yamaoka Y; Dept. of Environmental and Preventive Medicine, Oita University Faculty of Medicine, Oita, Japan.
Torres J; Unidad de Investigación en Enfermedades Infecciosas, UMAE Pediatria, IMSS, Mexico City, Mexico.
Sheppard SK; Milner Center for Evolution, Dept. of Biology and Biochemistry, University of Bath, Bath, United Kingdom.
Falush D; Milner Center for Evolution, Dept. of Biology and Biochemistry, University of Bath, Bath, United Kingdom.
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Źródło:
PLoS genetics [PLoS Genet] 2017 Feb 23; Vol. 13 (2), pp. e1006546. Date of Electronic Publication: 2017 Feb 23 (Print Publication: 2017).
Typ publikacji:
Journal Article
MeSH Terms:
Phylogeny*
Helicobacter Infections/*genetics
Helicobacter pylori/*genetics
Stomach Neoplasms/*genetics
Alleles ; DNA, Mitochondrial/genetics ; Evolution, Molecular ; Genome, Bacterial ; Helicobacter Infections/epidemiology ; Helicobacter pylori/pathogenicity ; Humans ; Indians, North American ; Latin America ; Stomach Neoplasms/epidemiology ; Stomach Neoplasms/microbiology ; White People
Czasopismo naukowe
Tytuł:
Genomic structure and insertion sites of Helicobacter pylori prophages from various geographical origins.
Autorzy:
Vale FF; Host-Pathogen Interactions Unit, Research Institute for Medicines (iMed-ULisboa), Faculdade de Farmácia da Universidade de Lisboa, Lisboa, Portugal.; Université de Bordeaux, Centre National de Référence des Campylobacters et Hélicobacters, Bordeaux, France.
Nunes A; Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health, Lisboa, Portugal.
Oleastro M; National Reference Laboratory of Gastrointestinal Infections, Department of Infectious Diseases, National Institute of Health, Lisboa, Portugal.
Gomes JP; Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health, Lisboa, Portugal.
Sampaio DA; Innovation and Tecnhology Unit, Department of Human Genetics, National Institute of Health, Lisboa, Portugal.
Rocha R; National Reference Laboratory of Gastrointestinal Infections, Department of Infectious Diseases, National Institute of Health, Lisboa, Portugal.
Vítor JM; Department of Biochemistry and Human Biology, Faculdade de Farmácia, Universidade de Lisboa, Lisboa, Portugal.
Engstrand L; Department of Microbiology, Tumor and Cell Biology, Karolinska Institute, Stockholm, Sweden.
Pascoe B; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, UK.
Berthenet E; Institute of Life Science, Swansea University Medical School, Swansea, UK.
Sheppard SK; The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, UK.
Hitchings MD; Institute of Life Science, Swansea University Medical School, Swansea, UK.
Mégraud F; Université de Bordeaux, Centre National de Référence des Campylobacters et Hélicobacters, Bordeaux, France.
Vadivelu J; UM Marshall Centre and Department of Medical Microbiology, University of Malaysia, Kuala Lumpur, Malaysia.
Lehours P; Université de Bordeaux, Centre National de Référence des Campylobacters et Hélicobacters, Bordeaux, France.; INSERM U1053, Bordeaux, France.
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Źródło:
Scientific reports [Sci Rep] 2017 Feb 16; Vol. 7, pp. 42471. Date of Electronic Publication: 2017 Feb 16.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Genome, Viral*
Genomics*/methods
Mutagenesis, Insertional*
Helicobacter pylori/*virology
Prophages/*genetics
Mosaicism ; Open Reading Frames ; Phylogeny ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł:
Genomic variations leading to alterations in cell morphology of Campylobacter spp.
Autorzy:
Esson D; Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, UK.
Mather AE; Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.
Scanlan E; Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, UK.
Gupta S; Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, UK.
de Vries SP; Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, UK.
Bailey D; Department of Chemical Engineering and Biotechnology, University of Cambridge, New Museums Site, Pembroke Street, Cambridge, UK.
Harris SR; Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.
McKinley TJ; Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, UK.
Méric G; The Milner Centre for Evolution, Department of Biology and Biotechnology, University of Bath, Claverton Down, Bath, UK.
Berry SK; Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, UK.
Mastroeni P; Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, UK.
Sheppard SK; The Milner Centre for Evolution, Department of Biology and Biotechnology, University of Bath, Claverton Down, Bath, UK.
Christie G; Department of Chemical Engineering and Biotechnology, University of Cambridge, New Museums Site, Pembroke Street, Cambridge, UK.
Thomson NR; Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.; The London School of Hygiene and Tropical Medicine, London, UK.
Parkhill J; Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.
Maskell DJ; Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, UK.
Grant AJ; Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, UK.
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Źródło:
Scientific reports [Sci Rep] 2016 Dec 02; Vol. 6, pp. 38303. Date of Electronic Publication: 2016 Dec 02.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Gene Expression Regulation, Bacterial*
Genome, Bacterial*
Bacterial Proteins/*genetics
Campylobacter Infections/*veterinary
Campylobacter coli/*genetics
Campylobacter jejuni/*genetics
Poultry Diseases/*microbiology
Animals ; Bacterial Proteins/metabolism ; Campylobacter Infections/microbiology ; Campylobacter coli/metabolism ; Campylobacter coli/ultrastructure ; Campylobacter jejuni/metabolism ; Campylobacter jejuni/ultrastructure ; Chickens ; DNA Transposable Elements ; Gene Library ; Humans ; Mutagenesis, Site-Directed ; Mutation ; Peptidoglycan/biosynthesis ; Peptidoglycan/genetics ; Whole Genome Sequencing
Czasopismo naukowe

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