Autor: "Ziegelbauer JM" - OpacWWW

Skocz do pozycji: 1.

Tytuł:: Transcriptional landscape of Kaposi sarcoma tumors identifies unique immunologic signatures and key determinants of angiogenesis.
Autorzy:: Ramaswami R; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Tagawa T; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Mahesh G; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Serquina A; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Koparde V; Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
Lurain K; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Dremel S; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Li X; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Mungale A; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Beran A; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Ohler ZW; Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
Bassel L; Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
Warner A; Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
Mangusan R; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Widell A; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Ekwede I; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Krug LT; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Uldrick TS; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Yarchoan R; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA.
Ziegelbauer JM; HIV and AIDS Malignancy Branch, National Cancer Institute, Bethesda, MD, 20892, USA. .; Pokaż więcej
Źródło:: Journal of translational medicine [J Transl Med] 2023 Sep 22; Vol. 21 (1), pp. 653. Date of Electronic Publication: 2023 Sep 22.
Typ publikacji:: Journal Article; Research Support, N.I.H., Intramural
MeSH Terms:: Sarcoma, Kaposi*/genetics
Herpesvirus 8, Human*/genetics
Skin Neoplasms*
Humans ; Endothelial Cells ; Skin ; Interleukin-6

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Skocz do pozycji: 2.

Tytuł:: A linear-time algorithm that avoids inverses and computes Jackknife (leave-one-out) products like convolutions or other operators in commutative semigroups.
Autorzy:: Spouge JL; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Room 6N603, Building 38A, Bethesda, MD 20894 USA.
Ziegelbauer JM; HIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892 USA.
Gonzalez M; Genomics Research and Development, Lenovo HPC and AI, 1009 Think Pl, Morrisville, NC 27560 USA.; Pokaż więcej
Źródło:: Algorithms for molecular biology : AMB [Algorithms Mol Biol] 2020 Sep 19; Vol. 15, pp. 17. Date of Electronic Publication: 2020 Sep 19 (Print Publication: 2020).
Typ publikacji:: Journal Article

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Skocz do pozycji: 3.

Tytuł:: Viral microRNAs Target a Gene Network, Inhibit STAT Activation, and Suppress Interferon Responses.
Autorzy:: Ramalingam D; HIV and AIDS Malignancy Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
Ziegelbauer JM; HIV and AIDS Malignancy Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2017 Jan 19; Vol. 7, pp. 40813. Date of Electronic Publication: 2017 Jan 19.
Typ publikacji:: Journal Article; Research Support, N.I.H., Intramural
MeSH Terms:: Interferons/*metabolism
STAT3 Transcription Factor/*metabolism
3' Untranslated Regions ; Antagomirs ; Base Sequence ; Gene Regulatory Networks ; Genetic Vectors ; Herpesvirus 8, Human/genetics ; Human Umbilical Vein Endothelial Cells ; Humans ; Inhibitor of Apoptosis Proteins/genetics ; Inhibitor of Apoptosis Proteins/metabolism ; Interleukin-6/pharmacology ; MicroRNAs/antagonists & inhibitors ; MicroRNAs/genetics ; MicroRNAs/metabolism ; RNA Interference ; RNA, Small Interfering/metabolism ; Receptors, Erythropoietin/genetics ; Receptors, Erythropoietin/metabolism ; STAT3 Transcription Factor/antagonists & inhibitors ; STAT3 Transcription Factor/genetics ; Sequence Alignment ; Signal Transduction/drug effects ; Survivin

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Skocz do pozycji: 4.

Tytuł:: RNA Sequencing Reveals that Kaposi Sarcoma-Associated Herpesvirus Infection Mimics Hypoxia Gene Expression Signature.
Autorzy:: Viollet C; HIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.; The Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, United Kingdom.
Davis DA; HIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.
Tekeste SS; HIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.
Reczko M; Institute of Molecular Oncology, Alexander Fleming Biomedical Sciences Research Center, Vari, Greece.
Ziegelbauer JM; HIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.
Pezzella F; Nuffield Division of Clinical Laboratory Sciences, University of Oxford, Oxford, United Kingdom.
Ragoussis J; The Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, United Kingdom.; Institute of Molecular Oncology, Alexander Fleming Biomedical Sciences Research Center, Vari, Greece.; McGill University and Génome Québec Innovation Centre, Montréal, Québec, Canada.; Department of Biochemistry, King Abdulaziz University, Jeddah, Saudi Arabia.
Yarchoan R; HIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.; Pokaż więcej
Źródło:: PLoS pathogens [PLoS Pathog] 2017 Jan 03; Vol. 13 (1), pp. e1006143. Date of Electronic Publication: 2017 Jan 03 (Print Publication: 2017).
Typ publikacji:: Journal Article; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Cell Hypoxia/*genetics
Gene Expression Regulation/*genetics
Herpesvirus 8, Human/*growth & development
MicroRNAs/*genetics
Sarcoma, Kaposi/*genetics
Base Sequence ; Cell Line, Tumor ; Computational Biology ; Endothelial Cells/pathology ; Endothelial Cells/virology ; Herpesvirus 8, Human/genetics ; High-Throughput Nucleotide Sequencing ; Humans ; MicroRNAs/biosynthesis ; Sarcoma, Kaposi/virology ; Sequence Analysis, RNA

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Skocz do pozycji: 5.

Tytuł:: Virus-Mediated Alterations in miRNA Factors and Degradation of Viral miRNAs by MCPIP1.
Autorzy:: Happel C; HIV and AIDS Malignancy Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.
Ramalingam D; HIV and AIDS Malignancy Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.
Ziegelbauer JM; HIV and AIDS Malignancy Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.; Pokaż więcej
Źródło:: PLoS biology [PLoS Biol] 2016 Nov 28; Vol. 14 (11), pp. e2000998. Date of Electronic Publication: 2016 Nov 28 (Print Publication: 2016).
Typ publikacji:: Journal Article
MeSH Terms:: Herpesvirus 8, Human/*physiology
MicroRNAs/*physiology
Ribonucleases/*physiology
Transcription Factors/*physiology
Humans ; RNA, Small Interfering/genetics ; Ribonucleases/genetics ; Transcription Factors/genetics

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Skocz do pozycji: 6.

Tytuł:: KSHV MicroRNAs Repress Tropomyosin 1 and Increase Anchorage-Independent Growth and Endothelial Tube Formation.
Autorzy:: Kieffer-Kwon P; HIV and AIDS Malignancy Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.
Happel C; HIV and AIDS Malignancy Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.
Uldrick TS; HIV and AIDS Malignancy Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.
Ramalingam D; HIV and AIDS Malignancy Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.
Ziegelbauer JM; HIV and AIDS Malignancy Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2015 Aug 11; Vol. 10 (8), pp. e0135560. Date of Electronic Publication: 2015 Aug 11 (Print Publication: 2015).
Typ publikacji:: Journal Article; Research Support, N.I.H., Intramural
MeSH Terms:: RNA Interference*
RNA, Viral*
Endothelial Cells/*metabolism
Herpesvirus 8, Human/*genetics
MicroRNAs/*genetics
Tropomyosin/*genetics
3' Untranslated Regions ; Anoikis/genetics ; Cell Line ; Endothelial Cells/virology ; Gene Expression Regulation ; Gene Order ; Human Umbilical Vein Endothelial Cells ; Humans ; Molecular Weight ; Protein Isoforms ; RNA, Messenger/genetics ; Tropomyosin/chemistry ; Tropomyosin/metabolism

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Skocz do pozycji: 7.

Tytuł:: Next-Generation Sequencing Analysis Reveals Differential Expression Profiles of MiRNA-mRNA Target Pairs in KSHV-Infected Cells.
Autorzy:: Viollet C; HIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America; The Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, United Kingdom.
Davis DA; HIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.
Reczko M; Institute of Molecular Oncology, Alexander Fleming Biomedical Sciences Research Center, Vari, Greece.
Ziegelbauer JM; HIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.
Pezzella F; Nuffield Division of Clinical Laboratory Sciences, University of Oxford, Oxford, United Kingdom.
Ragoussis J; The Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, United Kingdom; Institute of Molecular Oncology, Alexander Fleming Biomedical Sciences Research Center, Vari, Greece; McGill University and Génome Québec Innovation Centre, Montréal, Canada.
Yarchoan R; HIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2015 May 05; Vol. 10 (5), pp. e0126439. Date of Electronic Publication: 2015 May 05 (Print Publication: 2015).
Typ publikacji:: Journal Article; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Herpesvirus 8, Human/*genetics
Lymphoma, Primary Effusion/*genetics
MicroRNAs/*genetics
Sarcoma, Kaposi/*genetics
Base Sequence ; Cell Line, Tumor ; Epithelial-Mesenchymal Transition/genetics ; High-Throughput Nucleotide Sequencing ; Humans ; Interleukin-8/genetics ; Lymphoma, Primary Effusion/virology ; Proto-Oncogene Proteins c-mdm2/metabolism ; RNA, Messenger/genetics ; Sarcoma, Kaposi/virology ; Sequence Analysis, DNA ; Tumor Suppressor Protein p53/antagonists & inhibitors

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Skocz do pozycji: 8.

Tytuł:: Emerging themes from EBV and KSHV microRNA targets.
Autorzy:: Ramalingam D; HIV and AIDS Malignancy Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA. />Kieffer-Kwon P
Ziegelbauer JM; Pokaż więcej
Źródło:: Viruses [Viruses] 2012 Sep; Vol. 4 (9), pp. 1687-710. Date of Electronic Publication: 2012 Sep 21.
Typ publikacji:: Journal Article; Research Support, N.I.H., Intramural; Review
MeSH Terms:: Herpesvirus 4, Human/*pathogenicity
Herpesvirus 8, Human/*pathogenicity
MicroRNAs/*metabolism
RNA, Viral/*metabolism
Virulence Factors/*metabolism
Gene Expression Regulation ; Herpesvirus 4, Human/genetics ; Herpesvirus 8, Human/genetics ; Humans ; MicroRNAs/genetics ; RNA, Viral/genetics ; Virulence Factors/genetics

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Skocz do pozycji: 9.

Tytuł:: Tandem array-based expression screens identify host mRNA targets of virus-encoded microRNAs.
Autorzy:: Ziegelbauer JM; Howard Hughes Medical Institute, GW Hooper Foundation, University of California San Francisco, San Francisco, California 94143, USA.
Sullivan CS
Ganem D; Pokaż więcej
Źródło:: Nature genetics [Nat Genet] 2009 Jan; Vol. 41 (1), pp. 130-4. Date of Electronic Publication: 2008 Dec 21.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Regulation*
MicroRNAs/*genetics
Oligonucleotide Array Sequence Analysis/*methods
RNA, Viral/*genetics
Apoptosis ; Base Sequence ; Cell Line ; DNA-Binding Proteins ; Endothelial Cells/cytology ; Endothelial Cells/metabolism ; Genes, Reporter ; Herpesvirus 8, Human/genetics ; Humans ; Molecular Sequence Data ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Repressor Proteins ; Tumor Suppressor Proteins

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